##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933223.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 690775 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05603416452535 33.0 31.0 34.0 30.0 34.0 2 32.240083963664 34.0 31.0 34.0 30.0 34.0 3 32.32783612609026 34.0 31.0 34.0 30.0 34.0 4 35.85072997719952 37.0 35.0 37.0 35.0 37.0 5 35.14176830371684 37.0 35.0 37.0 35.0 37.0 6 34.74196084108429 37.0 35.0 37.0 32.0 37.0 7 35.56631175129384 37.0 35.0 37.0 33.0 37.0 8 35.77165357750353 37.0 35.0 37.0 35.0 37.0 9 37.67055553544932 39.0 37.0 39.0 35.0 39.0 10 37.17576345409142 39.0 37.0 39.0 34.0 39.0 11 37.07303246353733 39.0 37.0 39.0 33.0 39.0 12 36.93158264268394 39.0 37.0 39.0 33.0 39.0 13 36.81690999239984 39.0 35.0 39.0 33.0 39.0 14 37.92483514892693 40.0 37.0 41.0 33.0 41.0 15 37.9980818645724 40.0 37.0 41.0 33.0 41.0 16 38.04450074192031 40.0 37.0 41.0 33.0 41.0 17 37.966912525786256 40.0 37.0 41.0 33.0 41.0 18 37.94376750750968 40.0 37.0 41.0 33.0 41.0 19 37.94238355470305 40.0 37.0 41.0 33.0 41.0 20 37.8053693315479 40.0 36.0 41.0 33.0 41.0 21 37.72723969454598 39.0 36.0 41.0 33.0 41.0 22 37.7639694545981 39.0 36.0 41.0 33.0 41.0 23 37.67121276826752 39.0 36.0 41.0 33.0 41.0 24 37.62544967608845 39.0 36.0 41.0 33.0 41.0 25 37.52218015996526 39.0 35.0 41.0 33.0 41.0 26 37.50089681879049 39.0 35.0 41.0 33.0 41.0 27 37.41925373674496 39.0 35.0 41.0 33.0 41.0 28 37.30549165792045 39.0 35.0 41.0 32.0 41.0 29 37.243006767760846 39.0 35.0 41.0 32.0 41.0 30 37.15153848937787 39.0 35.0 41.0 32.0 41.0 31 37.05810719843654 39.0 35.0 41.0 31.0 41.0 32 36.98711157757591 39.0 35.0 41.0 31.0 41.0 33 36.84790706090985 39.0 35.0 41.0 31.0 41.0 34 36.691818609532774 39.0 35.0 41.0 31.0 41.0 35 36.57046650501248 39.0 35.0 41.0 30.0 41.0 36 36.399716260721654 39.0 35.0 40.0 30.0 41.0 37 36.28578191162101 38.0 35.0 40.0 30.0 41.0 38 36.113436357714164 38.0 35.0 40.0 30.0 41.0 39 36.10968694582172 38.0 35.0 40.0 30.0 41.0 40 36.0445499619992 38.0 35.0 40.0 29.0 41.0 41 35.989589953313306 38.0 35.0 40.0 29.0 41.0 42 35.89544497122797 38.0 35.0 40.0 29.0 41.0 43 35.67201766132243 38.0 35.0 40.0 28.0 41.0 44 35.5404972675618 38.0 34.0 40.0 28.0 41.0 45 35.57490065506134 38.0 34.0 40.0 28.0 41.0 46 35.419559190764 38.0 34.0 40.0 28.0 41.0 47 35.28742933661467 37.0 34.0 40.0 27.0 41.0 48 35.21133654228946 37.0 34.0 40.0 27.0 41.0 49 35.239513589808546 37.0 34.0 40.0 28.0 41.0 50 34.965545944772174 37.0 34.0 40.0 27.0 41.0 51 33.864827186855344 36.0 32.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 9.0 10 13.0 11 20.0 12 11.0 13 13.0 14 13.0 15 28.0 16 33.0 17 80.0 18 154.0 19 311.0 20 590.0 21 1037.0 22 1583.0 23 2256.0 24 3050.0 25 4436.0 26 5939.0 27 7235.0 28 8742.0 29 10277.0 30 12818.0 31 16403.0 32 21590.0 33 29602.0 34 47768.0 35 62611.0 36 64609.0 37 95223.0 38 144163.0 39 150116.0 40 39.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.036444573124392 4.62306829285947 50.7671817885708 17.573305345445334 2 20.14606782237342 7.803409214288299 50.191162100539245 21.85936086279903 3 20.670551192501176 7.882885165212985 51.35362455213347 20.092939090152363 4 18.46245159422388 4.683000977163331 53.31403134160906 23.540516087003727 5 19.077847345372952 7.919944989323585 49.76236835438457 23.239839310918896 6 20.510875465962144 9.684484817777134 52.450363721906555 17.35427599435417 7 80.03242734609678 1.912200065144222 13.147551662987226 4.907820925771778 8 81.5343635771416 4.764214107343202 8.528681553327784 5.172740762187398 9 76.18052187760125 4.95139517208932 10.438565379465095 8.429517570844341 10 39.54934674821759 24.73786688863957 18.3821070536716 17.330679309471243 11 29.962143968730775 24.342948137960985 25.12598168723535 20.568926206072888 12 25.115558611704248 21.22543519959466 31.48289964170678 22.17610654699432 13 22.934530056820236 23.853787412688646 34.11559480293872 19.096087727552387 14 20.21642358220839 26.608085121783503 31.62115015743187 21.554341138576234 15 17.570699576562557 22.757772067605224 38.293510911657194 21.378017444175022 16 19.363179038036986 22.185371503021965 33.4176830371684 25.033766421772647 17 19.67746371828743 22.889218631247513 30.83247077557815 26.6008468748869 18 21.53320545763816 22.0074553943035 31.97075748253773 24.488581665520613 19 22.289747023270966 23.768086569432885 29.33328507835402 24.608881328942132 20 24.733958235315406 24.63363613332851 29.783648800260575 20.848756831095507 21 24.196880315587567 25.95403713220658 28.912598168723534 20.93648438348232 22 21.98747783286888 23.78748507111578 28.726719988418804 25.49831710759654 23 21.5062791791828 26.01744417502081 27.46465925952734 25.011617386269048 24 22.621113966197388 23.266041764684594 29.023777641055336 25.089066628062685 25 21.18852014042199 25.86775722919909 27.88042416126814 25.063298469110784 26 21.98110817559987 24.860772320943866 28.27215808331222 24.88596142014404 27 22.393398718830298 25.094712460642032 28.535775035286452 23.976113785241214 28 19.637219065542325 25.831131699902283 31.03572074843473 23.49592848612066 29 22.22807715971192 24.46426115594803 28.862943795012846 24.444717889327205 30 23.236220187470593 26.79772719047447 28.408237124968334 21.557815497086604 31 23.92573558684087 27.732040099887804 25.47819478122399 22.86402953204734 32 25.10716224530419 28.41504107705114 24.940393036806483 21.53740364083819 33 24.73149723137056 25.653070826245884 25.33082407440918 24.284607867974376 34 24.05283920234519 25.258296840505228 27.396474973761354 23.292388983388225 35 24.951539937027253 24.926061307951215 26.581158843328147 23.54123991169339 36 27.700336578480695 26.13340089030437 25.140023886214756 21.02623864500018 37 23.847272990481706 28.089609496579925 27.85523506206797 20.2078824508704 38 22.10835655604213 30.893851109261337 24.95993630342731 22.037856031269225 39 22.807426441315915 27.859143715392133 27.647931670949294 21.68549817234266 40 24.30559878397452 25.134233288697477 28.40534182620969 22.154826101118307 41 23.83829756432992 23.534725489486448 27.674857949404654 24.952118996778978 42 26.782816401867464 23.60696319351453 26.31870001085737 23.29152039376063 43 26.5569830986935 23.842785277405813 26.164235822083892 23.4359958018168 44 22.86055517353697 24.52173283630705 27.85407694256451 24.763635047591475 45 23.13488473091817 24.67663131989432 26.343889110057546 25.844594839129964 46 25.336325142050597 25.186059136477144 27.395606384133764 22.082009337338494 47 21.853715030219682 25.312149397415943 30.298432919546887 22.535702652817488 48 23.12504071513879 25.31301798704354 28.101769751366216 23.46017154645145 49 23.92457746733741 22.97390611993775 30.57985595888676 22.52166045383808 50 23.899098838261374 23.12200065144222 27.981180558068836 24.99771995222757 51 22.1855162679599 23.3916977308096 26.24660707176722 28.176178929463287 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 196.0 1 521.0 2 846.0 3 2232.0 4 3618.0 5 2516.5 6 1415.0 7 1416.0 8 1417.0 9 1527.0 10 1637.0 11 1741.0 12 1845.0 13 1811.5 14 1778.0 15 1704.0 16 1630.0 17 1769.5 18 1909.0 19 1756.5 20 1604.0 21 1986.5 22 2369.0 23 2686.0 24 3003.0 25 3431.0 26 4234.0 27 4609.0 28 5671.0 29 6733.0 30 7823.0 31 8913.0 32 10012.5 33 11112.0 34 12649.5 35 14187.0 36 15887.5 37 17588.0 38 19564.0 39 21540.0 40 25328.0 41 29116.0 42 32429.5 43 35743.0 44 41877.0 45 48011.0 46 62546.0 47 77081.0 48 78847.5 49 80614.0 50 77181.5 51 73749.0 52 62540.5 53 51332.0 54 45527.5 55 39723.0 56 36330.0 57 32937.0 58 29530.0 59 26123.0 60 24339.5 61 22556.0 62 20151.5 63 17747.0 64 16173.0 65 14599.0 66 12210.5 67 9822.0 68 8253.5 69 6685.0 70 5798.0 71 4911.0 72 4080.0 73 3249.0 74 2667.0 75 1728.0 76 1371.0 77 1026.0 78 681.0 79 551.5 80 422.0 81 319.0 82 216.0 83 181.0 84 146.0 85 86.0 86 26.0 87 19.0 88 12.0 89 9.0 90 6.0 91 3.5 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 690775.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.364653285468464 #Duplication Level Percentage of deduplicated Percentage of total 1 75.475915422064 25.937036648825718 2 10.744883539945391 7.384883948859208 3 3.996912212034164 4.120575071370265 4 1.8454172680081427 2.53668498328465 5 1.0479005782883997 1.8005370025261376 6 0.751014699895528 1.5485015864519982 7 0.5227792766966828 1.257559001195664 8 0.3959297520167154 1.0884790922764744 9 0.32100825216292755 0.9928203558617914 >10 4.501213825616608 38.124217479430804 >50 0.3323154973273855 6.982641785195123 >100 0.057195003898923916 3.303451945791109 >500 0.0037573360225570457 0.9427161789191948 >1k 0.0037573360225570457 3.9798949200117764 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGC 4765 0.6898049292461366 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCG 4249 0.6151062212732077 No Hit GAATCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTTC 3449 0.4992942709275814 No Hit CCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTTCTGC 3448 0.49914950598964936 No Hit CTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTTCTGCT 3084 0.44645506858238937 Illumina Single End Adapter 2 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTTCTGC 2993 0.4332814592305744 No Hit TCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTTCTGC 2281 0.3302088234229669 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2034 0.29445188375375486 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGAAATGGT 1438 0.20817198074626325 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCT 990 0.14331728855271253 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTC 856 0.12391878686982014 No Hit TCCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTTCTG 838 0.12131301798704354 No Hit GAACTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTTCT 809 0.11711483478701458 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGAAATGGTCGTA 806 0.11668053997321848 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4476493793203287E-4 0.0 0.0 0.48076435887228114 0.0 2 1.4476493793203287E-4 0.0 0.0 1.8797727190474467 0.0 3 1.4476493793203287E-4 0.0 0.0 2.5438094893416814 0.0 4 1.4476493793203287E-4 0.0 0.0 3.3584017950852303 0.0 5 1.4476493793203287E-4 0.0 0.0 5.046650501248598 0.0 6 1.4476493793203287E-4 0.0 0.0 5.8377908870471575 0.0 7 1.4476493793203287E-4 0.0 0.0 6.746046107632731 0.0 8 1.4476493793203287E-4 0.0 0.0 8.045166660634795 0.0 9 1.4476493793203287E-4 0.0 0.0 8.667800658680468 0.0 10 1.4476493793203287E-4 0.0 0.0 10.402374144982085 0.0 11 1.4476493793203287E-4 0.0 0.0 12.38739097390612 0.0 12 1.4476493793203287E-4 0.0 0.0 14.855198870833485 0.0 13 1.4476493793203287E-4 0.0 0.0 15.484347291086099 0.0 14 1.4476493793203287E-4 0.0 0.0 15.722485613984293 0.0 15 1.4476493793203287E-4 0.0 0.0 16.14881835619413 0.0 16 1.4476493793203287E-4 0.0 0.0 16.898990264557924 0.0 17 1.4476493793203287E-4 0.0 0.0 18.0038362708552 0.0 18 1.4476493793203287E-4 0.0 0.0 19.172089319966705 0.0 19 1.4476493793203287E-4 0.0 0.0 20.161847200608012 0.0 20 1.4476493793203287E-4 0.0 0.0 20.948065578516882 0.0 21 1.4476493793203287E-4 0.0 0.0 22.004125800731064 0.0 22 1.4476493793203287E-4 0.0 0.0 23.06626615033839 0.0 23 1.4476493793203287E-4 0.0 0.0 24.102493576055878 0.0 24 1.4476493793203287E-4 0.0 0.0 24.86728674315081 0.0 25 1.4476493793203287E-4 0.0 0.0 25.534508342079548 0.0 26 1.4476493793203287E-4 0.0 0.0 26.126886468097428 0.0 27 1.4476493793203287E-4 0.0 0.0 26.73750497629474 0.0 28 1.4476493793203287E-4 0.0 0.0 27.37953747602331 0.0 29 1.4476493793203287E-4 0.0 0.0 27.998697115558613 0.0 30 2.8952987586406575E-4 0.0 0.0 28.746118490101697 0.0 31 2.8952987586406575E-4 0.0 0.0 29.38091274293366 0.0 32 2.8952987586406575E-4 0.0 0.0 30.021497593282906 0.0 33 2.8952987586406575E-4 0.0 0.0 30.639354348376823 0.0 34 2.8952987586406575E-4 0.0 0.0 31.231008649705043 0.0 35 2.8952987586406575E-4 0.0 0.0 31.887951938040608 0.0 36 2.8952987586406575E-4 0.0 0.0 32.503637219065546 0.0 37 2.8952987586406575E-4 0.0 0.0 33.10701748036625 0.0 38 2.8952987586406575E-4 0.0 0.0 33.70156708045312 0.0 39 2.8952987586406575E-4 0.0 0.0 34.28337736600196 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTTG 30 2.164239E-6 45.000004 1 CAACGAA 30 2.164239E-6 45.000004 14 AACCCGA 30 2.164239E-6 45.000004 24 GTGCGTT 30 2.164239E-6 45.000004 21 TTCTCGT 30 2.164239E-6 45.000004 1 CTTCACG 35 1.2109922E-7 45.0 1 TAGGTCG 20 7.0313306E-4 45.0 32 CCGTACT 40 6.8084773E-9 45.0 44 CGAGGTA 20 7.0313306E-4 45.0 19 CGATGTA 20 7.0313306E-4 45.0 11 CGGTCGA 35 1.2109922E-7 45.0 41 AATCGCC 20 7.0313306E-4 45.0 42 CATATCG 25 3.889185E-5 44.999996 29 CGTTGAT 75 0.0 42.0 25 TTCACGG 65 0.0 41.53846 2 TTCTTCG 110 0.0 40.909092 1 TGTACGG 55 6.002665E-11 40.909092 2 CGAGACA 235 0.0 40.212765 22 CGTTTTT 1225 0.0 40.040813 1 TACGGGA 90 0.0 40.0 4 >>END_MODULE