SRR2933222.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933222.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2808714
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	27607	0.9829053438691159	No Hit
CTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTGCT	9108	0.3242765194320248	No Hit
CCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTGC	8146	0.29002596918020135	No Hit
TCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTGC	5961	0.2122323597204984	No Hit
GCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTGC	5024	0.1788718965334313	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCC	4754	0.169258956234063	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTC	3829	0.13632573483807892	No Hit
CGCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTG	3738	0.1330858179223659	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTT	3582	0.12753167463828644	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCT	3409	0.12137227215017264	No Hit
TCCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTG	3385	0.12051778856800657	No Hit
TTTCTGGGGTCTGATGAGCGTCGGCATCGGGCGCCTTAACCCGGCGTTCGG	2994	0.10659682687521764	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	13200	0.0	42.647728	1
TACGGGT	185	0.0	40.135136	4
TATCGCG	65	9.094947E-12	38.07692	1
CTTACGG	245	0.0	37.65306	2
GCGATCT	875	0.0	37.285713	9
TTACGGG	745	0.0	37.14765	3
TCTTACG	160	0.0	36.5625	1
TTTGGGC	8075	0.0	36.473682	4
TGGGCGA	4920	0.0	36.310974	6
TTGGGAC	4620	0.0	36.282467	5
TTTGGGA	12005	0.0	36.247395	4
GGGCGAT	7500	0.0	36.210003	7
GTTTTTT	16580	0.0	35.527744	2
TTGGGAT	5790	0.0	35.479275	5
GCCGATT	620	0.0	35.20161	9
CTTGGGA	6320	0.0	35.06725	4
GGCGATT	3915	0.0	34.942528	8
CGTTAGG	335	0.0	34.92537	2
TATGGGC	845	0.0	34.881657	4
CGTTATT	400	0.0	34.875	1