##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933218.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1053561 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05615052189669 33.0 31.0 34.0 30.0 34.0 2 32.23522700631477 34.0 31.0 34.0 30.0 34.0 3 32.30630309967814 34.0 31.0 34.0 30.0 34.0 4 35.83935339292172 37.0 35.0 37.0 35.0 37.0 5 35.07060530904238 37.0 35.0 37.0 33.0 37.0 6 34.72565708108026 37.0 35.0 37.0 32.0 37.0 7 35.545112243144914 37.0 35.0 37.0 33.0 37.0 8 35.807568807121754 37.0 35.0 37.0 35.0 37.0 9 37.66419599814344 39.0 37.0 39.0 35.0 39.0 10 37.12106560512395 39.0 37.0 39.0 33.0 39.0 11 37.062519398497095 39.0 37.0 39.0 33.0 39.0 12 36.9068122301414 39.0 37.0 39.0 33.0 39.0 13 36.83565450885141 39.0 37.0 39.0 33.0 39.0 14 37.86366522678801 40.0 37.0 41.0 33.0 41.0 15 37.96699574111039 40.0 37.0 41.0 33.0 41.0 16 37.986537087078965 40.0 37.0 41.0 33.0 41.0 17 37.89622717621476 40.0 37.0 41.0 33.0 41.0 18 37.88644131663947 40.0 37.0 41.0 33.0 41.0 19 37.87781723127564 40.0 37.0 41.0 33.0 41.0 20 37.77372548907942 39.0 36.0 41.0 33.0 41.0 21 37.66006619455352 39.0 36.0 41.0 33.0 41.0 22 37.74023905592557 39.0 36.0 41.0 33.0 41.0 23 37.64400827289545 39.0 36.0 41.0 33.0 41.0 24 37.57822850314315 39.0 36.0 41.0 33.0 41.0 25 37.47410733692686 39.0 36.0 41.0 33.0 41.0 26 37.445330645306726 39.0 35.0 41.0 33.0 41.0 27 37.415701606266744 39.0 35.0 41.0 33.0 41.0 28 37.31314370976147 39.0 35.0 41.0 32.0 41.0 29 37.23993105287686 39.0 35.0 41.0 32.0 41.0 30 37.1542986120405 39.0 35.0 41.0 32.0 41.0 31 37.08226861092998 39.0 35.0 41.0 32.0 41.0 32 37.02101159780971 39.0 35.0 41.0 31.0 41.0 33 36.94250261731404 39.0 35.0 41.0 31.0 41.0 34 36.80796745513549 39.0 35.0 41.0 31.0 41.0 35 36.6290959896959 39.0 35.0 40.0 31.0 41.0 36 36.49827964398834 39.0 35.0 40.0 30.0 41.0 37 36.522259271176516 39.0 35.0 40.0 30.0 41.0 38 36.38914785190416 39.0 35.0 40.0 30.0 41.0 39 36.35295156141885 39.0 35.0 40.0 30.0 41.0 40 36.237755573716186 38.0 35.0 40.0 30.0 41.0 41 36.125290324907624 38.0 35.0 40.0 30.0 41.0 42 36.02313107641608 38.0 35.0 40.0 30.0 41.0 43 35.90630442850485 38.0 35.0 40.0 29.0 41.0 44 35.84946101839381 38.0 35.0 40.0 29.0 41.0 45 35.82075741224286 38.0 35.0 40.0 29.0 41.0 46 35.56632506328537 38.0 34.0 40.0 28.0 41.0 47 35.44765134624383 38.0 34.0 40.0 28.0 41.0 48 35.385491680121035 37.0 34.0 40.0 28.0 41.0 49 35.48774204815858 37.0 34.0 40.0 28.0 41.0 50 35.29409687716231 37.0 34.0 40.0 28.0 41.0 51 34.17468091548567 36.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 13.0 10 34.0 11 27.0 12 22.0 13 32.0 14 23.0 15 32.0 16 58.0 17 131.0 18 189.0 19 437.0 20 739.0 21 1353.0 22 2078.0 23 2996.0 24 4248.0 25 6078.0 26 8386.0 27 10550.0 28 12707.0 29 15432.0 30 19528.0 31 24813.0 32 32988.0 33 45879.0 34 72347.0 35 90200.0 36 101619.0 37 147495.0 38 225011.0 39 228041.0 40 68.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.88626667084298 4.268760897565495 54.97754757436921 15.867424857222314 2 21.17456891437705 6.248238118153576 49.5201511825134 23.057041784955974 3 20.891149159849313 6.461609721696228 49.689007091188834 22.958234027265625 4 18.95818087419713 4.772101473004411 50.41074982843898 25.858967824359482 5 18.811155690083442 7.822423191443114 48.73405526590297 24.632365852570473 6 21.373418340276455 8.344557173243885 52.04245411513904 18.239570371340623 7 81.50073892256832 2.1717774291189595 11.494920559891645 4.832563088421079 8 83.56412205842851 3.4983261529232763 8.0362693759545 4.901282412693712 9 77.65463983575702 5.326696793066562 10.102974578595829 6.915688792580591 10 37.512018763033176 27.17175370007052 17.990415362755456 17.325812174140843 11 29.980513705423796 24.129689690487783 24.947013034840886 20.942783569247535 12 23.94014205157556 21.989139689111497 32.39584608769687 21.674872171616073 13 24.00791221391073 23.73341458159518 33.318431490915096 18.940241713578995 14 20.534833768524084 25.946955135962703 32.850969236712444 20.66724185880077 15 18.82947451547656 22.47748350593843 36.02268876695322 22.670353211631788 16 21.43938509493043 22.666271815300682 32.15143688879903 23.742906200969855 17 20.86191497217532 22.357509437042562 30.69219532613679 26.088380264645334 18 23.57784694004429 20.404418918316072 31.58421771496857 24.43351642667107 19 23.505900465184265 23.83336133361049 29.14439695470884 23.516341246496406 20 25.65916923652261 24.89262605582401 29.03059243840651 20.417612269246867 21 24.761451876066026 26.359840578760984 28.86391960218725 20.01478794298574 22 23.07194362737421 22.538609534711327 29.034673834737617 25.354773003176845 23 22.039824936572252 25.911931060470156 27.761088347043977 24.28715565591361 24 21.880365731077745 24.655905068619663 29.384914589663058 24.078814610639533 25 21.86688763156571 26.159852158536623 27.79582767395528 24.17743253594239 26 20.274763397658038 26.23388678965907 27.73688471763856 25.75446509504433 27 21.82854148929203 24.122096394988045 28.750399834466155 25.29896228125377 28 19.0474970125128 25.44930953214859 29.91853343090718 25.58466002443143 29 20.620068510508645 24.9379010802412 28.58363208205315 25.858398327197 30 22.831425992419994 24.268836830520492 29.012463445400883 23.88727373165863 31 23.91470451165144 26.21813070149711 24.87354790088092 24.993616885970532 32 21.828636405485778 27.356080948326678 25.18791033457009 25.627372311617457 33 21.397621969681868 25.11567911112883 25.683752530703014 27.802946388486287 34 20.400812102953697 25.96119256502471 27.245598498805478 26.392396833216115 35 19.173260969227222 27.070478121342763 27.11736672105365 26.638894188376373 36 21.641651503804717 28.48577348630027 25.38894283292567 24.483632176969344 37 21.648960050723215 25.229673459818653 26.05829183122762 27.063074658230512 38 21.23208812778757 27.73811862815727 25.801923191917698 25.22787005213746 39 20.91971893416708 25.19692737297603 26.689674352030874 27.193679340826016 40 21.678004406009713 26.053735853927773 27.151061969833734 25.117197770228778 41 19.0765413677993 26.288273768675946 26.78098373041523 27.85420113310952 42 21.41034073964393 26.208639082122442 27.6601924330912 24.720827745142426 43 21.8148735573925 23.00398363265155 28.754291398409777 26.426851411546178 44 22.190836600823303 23.66697324597247 27.6429176858293 26.49927246737493 45 22.21931145894732 23.32432578654677 25.28548418174173 29.17087857276418 46 23.101367647435698 24.3208509046937 26.580046148253402 25.997735299617204 47 18.97289288422787 26.315514716281257 29.218811250606276 25.492781148884593 48 19.709442547702505 26.139255344493577 28.323561711187107 25.827740396616804 49 21.554328605557725 23.56996889596331 29.632740771535772 25.242961726943197 50 20.959204070765715 23.220677302975336 27.843001022247403 27.977117604011536 51 19.452219662648865 23.045746757900112 26.439570181508238 31.062463397942786 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 160.0 1 649.5 2 1139.0 3 3131.0 4 5123.0 5 3459.0 6 1795.0 7 1871.0 8 1947.0 9 2087.5 10 2228.0 11 2281.5 12 2335.0 13 2502.5 14 2670.0 15 2537.0 16 2404.0 17 2423.0 18 2442.0 19 2689.5 20 2937.0 21 3073.0 22 3209.0 23 3865.5 24 4522.0 25 5291.5 26 6697.0 27 7333.0 28 8706.0 29 10079.0 30 11974.5 31 13870.0 32 16683.5 33 19497.0 34 21187.0 35 22877.0 36 24352.5 37 25828.0 38 28346.0 39 30864.0 40 36551.0 41 42238.0 42 47388.0 43 52538.0 44 60951.5 45 69365.0 46 85708.0 47 102051.0 48 110144.0 49 118237.0 50 115210.5 51 112184.0 52 99526.0 53 86868.0 54 76397.0 55 65926.0 56 60035.0 57 54144.0 58 48893.5 59 43643.0 60 39459.5 61 35276.0 62 31651.5 63 28027.0 64 25249.0 65 22471.0 66 19624.0 67 16777.0 68 14170.0 69 11563.0 70 9766.0 71 7969.0 72 6472.0 73 4975.0 74 4557.5 75 3655.5 76 3171.0 77 2395.0 78 1619.0 79 1067.5 80 516.0 81 436.0 82 356.0 83 235.5 84 115.0 85 70.0 86 25.0 87 30.5 88 36.0 89 20.5 90 5.0 91 5.0 92 5.0 93 3.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1053561.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.5261855817957 #Duplication Level Percentage of deduplicated Percentage of total 1 75.26232586681662 25.98521030195294 2 10.692172102938843 7.383198365971305 3 4.003222346872053 4.146479930198887 4 2.0239809724785776 2.795213706792748 5 1.1558893338361667 1.9954224826022844 6 0.7497388753620702 1.5531374129182576 7 0.5392100786678384 1.3031807070562311 8 0.40196991443560853 1.1102790291281888 9 0.3199030691042531 0.9940529458871509 >10 4.430210267297441 37.487958078477554 >50 0.3411285361428862 7.336921276147041 >100 0.07327049378359822 4.510091379478268 >500 0.004025851306216617 0.9817841869191798 >1k 0.002952290957892186 2.417070196470022 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTCTGC 3497 0.3319219295323194 No Hit GAATCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTC 2938 0.2788637772278966 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2936 0.27867394484040314 No Hit CTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTCTGCT 2794 0.2651958453283673 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGC 2786 0.2644365157783935 No Hit CCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTCTGC 2748 0.26082970041601766 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCG 2598 0.24659227135400796 No Hit GCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTCTGC 2386 0.22647003827970094 No Hit TCCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTCTG 1342 0.12737753200811344 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.84748581240194E-4 0.0 0.0 0.2838943354964734 0.0 2 2.84748581240194E-4 0.0 0.0 1.189869404809024 0.0 3 2.84748581240194E-4 0.0 0.0 1.8155569539874767 0.0 4 2.84748581240194E-4 0.0 0.0 2.6623043184020667 0.0 5 2.84748581240194E-4 0.0 0.0 4.067633483016171 0.0 6 2.84748581240194E-4 0.0 0.0 4.94200145981106 0.0 7 2.84748581240194E-4 0.0 0.0 5.797481114050349 0.0 8 2.84748581240194E-4 0.0 0.0 7.0965990578618605 0.0 9 2.84748581240194E-4 0.0 0.0 7.788917775050519 0.0 10 2.84748581240194E-4 0.0 0.0 9.22594894837603 0.0 11 3.796647749869253E-4 0.0 0.0 11.388899171476545 0.0 12 3.796647749869253E-4 0.0 0.0 13.586209056713376 0.0 13 3.796647749869253E-4 0.0 0.0 14.203638897035862 0.0 14 3.796647749869253E-4 0.0 0.0 14.419573237809676 0.0 15 3.796647749869253E-4 0.0 0.0 14.764593602079044 0.0 16 3.796647749869253E-4 0.0 0.0 15.53654700582121 0.0 17 3.796647749869253E-4 0.0 0.0 16.6664293761823 0.0 18 4.745809687336566E-4 0.0 0.0 17.942197936332114 0.0 19 5.69497162480388E-4 0.0 0.0 18.803182729808714 0.0 20 5.69497162480388E-4 0.0 0.0 19.681347354353473 0.0 21 5.69497162480388E-4 0.0 0.0 20.745927383416813 0.0 22 5.69497162480388E-4 0.0 0.0 21.859863833228452 0.0 23 5.69497162480388E-4 0.0 0.0 22.92207095744812 0.0 24 5.69497162480388E-4 0.0 0.0 23.76065552920049 0.0 25 5.69497162480388E-4 0.0 0.0 24.50147642139373 0.0 26 5.69497162480388E-4 0.0 0.0 25.13418776890944 0.0 27 5.69497162480388E-4 0.0 0.0 25.794045147836716 0.0 28 5.69497162480388E-4 0.0 0.0 26.484750289731682 0.0 29 5.69497162480388E-4 0.0 0.0 27.232500064068432 0.0 30 5.69497162480388E-4 0.0 0.0 28.116264744044248 0.0 31 5.69497162480388E-4 0.0 0.0 28.82358021984489 0.0 32 5.69497162480388E-4 0.0 0.0 29.474705308947463 0.0 33 5.69497162480388E-4 0.0 0.0 30.17006134433602 0.0 34 5.69497162480388E-4 0.0 0.0 30.871492016124364 0.0 35 5.69497162480388E-4 0.0 0.0 31.673154188509255 0.0 36 6.644133562271193E-4 0.0 0.0 32.33775737712387 0.0 37 6.644133562271193E-4 0.0 0.0 33.01346576040685 0.0 38 6.644133562271193E-4 0.0 0.0 33.698286098289515 0.0 39 6.644133562271193E-4 0.0 0.0 34.52548072679228 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAT 30 2.1653286E-6 45.000004 45 GATAACG 30 2.1653286E-6 45.000004 17 GTTTACG 35 1.2117926E-7 45.0 1 TAAGTCG 20 7.0330186E-4 45.0 16 TCGGATA 20 7.0330186E-4 45.0 13 CATAGCG 25 3.890584E-5 45.0 10 AGCGAAC 20 7.0330186E-4 45.0 31 ACACGAC 1005 0.0 40.074627 26 CACGACC 1010 0.0 39.87624 27 TGGTCAA 1120 0.0 39.57589 14 AACACGT 900 0.0 39.5 41 GTCAAGC 1125 0.0 39.4 16 TTCGGGT 160 0.0 39.375 4 AGACACG 1030 0.0 39.32039 24 CGACCAA 1040 0.0 39.158657 29 ATGGTCA 1135 0.0 39.052864 13 GACACGA 1035 0.0 38.913044 25 CGAGACA 1090 0.0 38.807343 22 TCAAGCG 1145 0.0 38.711792 17 GCGAGAC 1105 0.0 38.687786 21 >>END_MODULE