##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933217.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2561830 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.13096653564054 33.0 31.0 34.0 30.0 34.0 2 32.40614482615943 34.0 31.0 34.0 30.0 34.0 3 32.31113696068826 33.0 31.0 34.0 30.0 34.0 4 35.956743812040614 37.0 35.0 37.0 35.0 37.0 5 35.203767619240935 37.0 35.0 37.0 35.0 37.0 6 34.9990362358158 37.0 35.0 37.0 33.0 37.0 7 35.773692243435356 37.0 35.0 37.0 35.0 37.0 8 36.02595878727316 37.0 35.0 37.0 35.0 37.0 9 37.91039569370333 39.0 38.0 39.0 35.0 39.0 10 37.370814612991495 39.0 37.0 39.0 34.0 39.0 11 37.320630955215606 39.0 37.0 39.0 34.0 39.0 12 37.326556406943475 39.0 37.0 39.0 34.0 39.0 13 37.40023147515643 39.0 37.0 39.0 34.0 39.0 14 38.6946951983543 40.0 38.0 41.0 35.0 41.0 15 38.736030493826675 40.0 38.0 41.0 35.0 41.0 16 38.68742890824137 40.0 38.0 41.0 34.0 41.0 17 38.616631860818245 40.0 38.0 41.0 34.0 41.0 18 38.303979967445144 39.0 38.0 41.0 34.0 41.0 19 38.00858370774017 39.0 37.0 41.0 34.0 41.0 20 37.63453117498039 39.0 35.0 41.0 34.0 41.0 21 37.50795056658717 39.0 35.0 41.0 33.0 41.0 22 37.548019970099496 39.0 35.0 41.0 33.0 41.0 23 37.467292521361685 39.0 35.0 41.0 33.0 41.0 24 37.387991787120924 39.0 35.0 41.0 33.0 41.0 25 37.29218761588396 39.0 35.0 41.0 33.0 41.0 26 37.266708563800094 39.0 35.0 41.0 33.0 41.0 27 37.22765327910127 39.0 35.0 41.0 33.0 41.0 28 37.11626376457454 39.0 35.0 41.0 33.0 41.0 29 36.97207894356768 39.0 35.0 41.0 33.0 41.0 30 36.71121854299466 39.0 35.0 41.0 32.0 41.0 31 36.33952018674151 39.0 35.0 41.0 31.0 41.0 32 35.750450264069045 39.0 35.0 41.0 27.0 41.0 33 34.91560212816619 39.0 35.0 41.0 21.0 41.0 34 34.16637130488752 38.0 34.0 41.0 15.0 41.0 35 33.697863246195105 38.0 33.0 40.0 10.0 41.0 36 33.41175878180832 38.0 33.0 40.0 10.0 41.0 37 33.32524211208394 38.0 33.0 40.0 10.0 41.0 38 33.21569034635397 38.0 33.0 40.0 10.0 41.0 39 33.13325044987372 38.0 33.0 40.0 10.0 41.0 40 33.06547350917118 38.0 33.0 40.0 10.0 41.0 41 32.96964708821429 38.0 32.0 40.0 9.0 41.0 42 32.87437730060152 38.0 32.0 40.0 9.0 41.0 43 32.76010000663588 38.0 32.0 40.0 8.0 41.0 44 32.696746466393165 38.0 31.0 40.0 8.0 41.0 45 32.733006483646456 38.0 31.0 40.0 8.0 41.0 46 32.563540906305256 38.0 31.0 40.0 8.0 41.0 47 32.51827521732511 38.0 31.0 40.0 8.0 41.0 48 32.405976196703136 38.0 31.0 40.0 8.0 41.0 49 32.43447028101006 38.0 31.0 40.0 8.0 41.0 50 32.26257597108317 38.0 31.0 40.0 8.0 41.0 51 31.367302670356736 36.0 28.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 9.0 9 5.0 10 15.0 11 13.0 12 9.0 13 19.0 14 18.0 15 58.0 16 153.0 17 408.0 18 1068.0 19 2247.0 20 4174.0 21 6970.0 22 11814.0 23 19987.0 24 37770.0 25 73629.0 26 104219.0 27 94029.0 28 68254.0 29 52115.0 30 48143.0 31 51569.0 32 60692.0 33 78215.0 34 115038.0 35 151065.0 36 183609.0 37 275326.0 38 482500.0 39 638484.0 40 206.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 18.837276478142577 3.761490809304286 48.1496039940199 29.251628718533233 2 34.12240468727433 3.3077526611836072 43.83596881916443 18.733873832377636 3 15.045377718271705 3.249005593657659 61.89009419048103 19.815522497589612 4 13.269615860537193 3.499802875288368 62.32123130730767 20.90934995686677 5 12.926111412544937 6.613124211989085 62.00754929093656 18.45321508452942 6 15.881615876151034 5.985096591108699 64.19348668725091 13.939800845489358 7 69.1577505142808 0.9786363654106635 25.96764812653455 3.8959649937739824 8 72.1755151590855 1.1475780984686728 23.386563511240013 3.2903432312058176 9 66.93117810315282 3.64442605481238 25.29750217617875 4.126893665856048 10 28.946768520940108 17.174793019052785 37.22881690041884 16.64962155958826 11 21.47066745256321 23.01987251300828 37.48999738468204 18.01946264974647 12 15.38903830464941 20.30099577255321 45.09518586323058 19.214780059566795 13 16.751033440938702 20.280385505673678 46.97962003723901 15.988961016148611 14 17.15258233372238 21.930729205294654 45.42299840348501 15.493690057497961 15 15.694679194169792 22.835160803019715 45.558877833423765 15.911282169386729 16 15.90464628800506 21.661585663373447 44.708274944082945 17.725493104538554 17 16.5487561625869 22.821498694292753 42.80643134009673 17.82331380302362 18 17.543708989277196 21.57961301101166 43.07104686883985 17.80563113087129 19 17.692821147382926 24.70897756681747 40.75524137042661 16.842959915372997 20 18.522423423880586 23.244399511286854 40.99561641482846 17.2375606500041 21 18.33466701537573 24.053547659290427 41.30761994355597 16.304165381777867 22 17.85333140762658 22.141906371617164 41.0488205696709 18.955941651085357 23 16.413579355382677 23.251894153788502 40.47091337052029 19.86361312030853 24 16.486691154370117 22.81478474371836 41.739420648520785 18.959103453390743 25 16.670934449202328 24.394202581748203 40.26262476432863 18.672238204720845 26 16.44949118403641 24.941116311386782 40.49975993723237 18.109632567344438 27 17.005695147609327 23.955102407263556 40.18478977918129 18.854412665945826 28 17.53172536819383 23.243735923148687 40.34127947599958 18.883259232657903 29 17.42324822490173 22.693387149030187 39.831019232345625 20.052345393722458 30 17.516189598841454 23.523692048262376 39.23777143682446 19.722346916071714 31 16.79377632395592 24.377105428541316 38.2537873317121 20.575330915790666 32 16.88226775391029 25.361440845020944 37.37020020844474 20.386091192624022 33 18.620127018576564 24.501274479571244 35.67383471971208 21.20476378214011 34 17.9592713021551 25.555091477576575 34.234746255606346 22.25089096466198 35 18.506302135582768 26.06597627477233 32.3741231853792 23.053598404265703 36 18.96530995421242 27.20840180652112 31.219245617390694 22.60704262187577 37 19.100955176573 28.327640788030433 31.508452941842357 21.062951093554215 38 19.7334717760351 27.8884235097567 32.118993063552224 20.259111650655974 39 20.680724325970107 25.881967187518296 32.20666476698298 21.23064371952862 40 20.400455924085517 25.823220119992353 32.00181120527123 21.774512750650903 41 19.36592201668339 26.353114765616763 31.644137198799292 22.636826018900553 42 20.140524546905922 27.74270736153453 30.941787706444224 21.174980385115326 43 20.147394635865766 26.66781168149331 32.31963088885679 20.86516279378413 44 20.10875038546664 26.43274534219679 31.303833587708784 22.154670684627785 45 20.320669209120044 25.573476772463433 31.032191831620366 23.073662186796156 46 20.288738909295308 26.019525105100648 30.47204537381481 23.21969061178923 47 19.703376102239414 26.29097168820726 31.242744444401072 22.762907765152253 48 19.51694687001089 25.829973105163106 31.795083982934074 22.85799604189193 49 20.39100955176573 24.70897756681747 31.92218062869121 22.97783225272559 50 19.607350995187034 24.034498776265405 32.229539040451556 24.12861118809601 51 18.785282395787387 23.954829165089016 31.949700019126954 25.310188419996642 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 174.0 1 654.5 2 1135.0 3 35578.5 4 70022.0 5 51306.5 6 32591.0 7 33788.0 8 34985.0 9 36193.0 10 37401.0 11 38165.5 12 38930.0 13 39211.0 14 39492.0 15 39133.0 16 38774.0 17 37704.5 18 36635.0 19 35459.5 20 34284.0 21 32973.5 22 31663.0 23 30749.0 24 29835.0 25 29656.0 26 30858.0 27 32239.0 28 33790.0 29 35341.0 30 39885.0 31 44429.0 32 50226.5 33 56024.0 34 64161.5 35 72299.0 36 81137.0 37 89975.0 38 98452.5 39 106930.0 40 117722.0 41 128514.0 42 139516.5 43 150519.0 44 170274.5 45 190030.0 46 215279.0 47 240528.0 48 250786.5 49 261045.0 50 243383.0 51 225721.0 52 190935.0 53 156149.0 54 132137.0 55 108125.0 56 91520.0 57 74915.0 58 63165.0 59 51415.0 60 43126.0 61 34837.0 62 27955.5 63 21074.0 64 16902.5 65 12731.0 66 9737.0 67 6743.0 68 5068.0 69 3393.0 70 2471.5 71 1550.0 72 1214.0 73 878.0 74 724.5 75 387.5 76 204.0 77 165.0 78 126.0 79 98.0 80 70.0 81 49.0 82 28.0 83 21.5 84 15.0 85 12.0 86 9.0 87 5.0 88 1.0 89 2.0 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2561830.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.80673983520964 #Duplication Level Percentage of deduplicated Percentage of total 1 77.65970884016974 32.46699243159106 2 8.186882552839348 6.845337378959432 3 3.1843412677388336 3.993807807806371 4 1.9135095683539605 3.199903867854333 5 1.348647325708559 2.819127393767448 6 1.0886668094092533 2.7308166040920243 7 0.8537276507711062 2.498409885013864 8 0.7381238712566112 2.4686842121426333 9 0.6346670482598549 2.388002415172217 >10 4.2488716141271174 29.522208044501586 >50 0.09433882435290795 2.7196821227503576 >100 0.043308376476671635 3.3095494277778794 >500 0.0033130685229554265 0.9596271116985735 >1k 0.0014198865098378186 1.6150497775382844 >5k 3.786364026234183E-4 0.8898187804255796 >10k+ 9.465910065585457E-5 1.572982738908425 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 39748 1.5515471362268378 No Hit CTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTCTGCT 6095 0.2379158648309997 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCT 5677 0.2215994035513676 No Hit CGTTTCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTT 5470 0.21351924210427703 No Hit CGCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTCTG 5243 0.20465838872993133 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCC 4717 0.1841261910431215 No Hit CCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTCTGC 4459 0.1740552651815304 No Hit CGTTCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTC 3825 0.14930733108754288 No Hit TCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTCTGC 3645 0.14228110374224676 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGT 3399 0.13267859303700869 No Hit GCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTCTGC 3185 0.12432518941537885 No Hit CGTCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTCT 3164 0.12350546289176095 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTC 2896 0.11304419106654226 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCG 2635 0.10285616141586287 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.806919272551262E-5 0.0 0.0 0.25505205263424974 0.0 2 7.806919272551262E-5 0.0 0.0 0.7416963654887326 0.0 3 7.806919272551262E-5 0.0 0.0 1.2532057162262913 0.0 4 7.806919272551262E-5 0.0 0.0 1.8131960356463934 0.0 5 7.806919272551262E-5 0.0 0.0 2.835395010597893 0.0 6 7.806919272551262E-5 0.0 0.0 4.438702021601745 0.0 7 7.806919272551262E-5 0.0 0.0 5.719466162860143 0.0 8 7.806919272551262E-5 0.0 0.0 7.232017737320588 0.0 9 7.806919272551262E-5 0.0 0.0 8.217407087902007 0.0 10 7.806919272551262E-5 0.0 0.0 9.381028405475773 0.0 11 7.806919272551262E-5 0.0 0.0 10.934175960153484 0.0 12 7.806919272551262E-5 0.0 0.0 12.275287587388702 0.0 13 7.806919272551262E-5 0.0 0.0 12.954216321926124 0.0 14 7.806919272551262E-5 0.0 0.0 13.25568050963569 0.0 15 1.1710378908826894E-4 0.0 0.0 13.514636021906215 0.0 16 1.1710378908826894E-4 0.0 0.0 13.958186140376215 0.0 17 1.1710378908826894E-4 0.0 0.0 14.604520986950735 0.0 18 1.1710378908826894E-4 0.0 0.0 15.344304657217693 0.0 19 1.1710378908826894E-4 0.0 0.0 15.830051174355832 0.0 20 1.1710378908826894E-4 0.0 0.0 16.31946694355207 0.0 21 1.1710378908826894E-4 0.0 0.0 16.93449604384366 0.0 22 1.1710378908826894E-4 0.0 0.0 17.580830890418177 0.0 23 1.1710378908826894E-4 0.0 0.0 18.24988387207582 0.0 24 1.1710378908826894E-4 0.0 0.0 18.791645034994517 0.0 25 1.1710378908826894E-4 0.0 0.0 19.275556926103604 0.0 26 1.1710378908826894E-4 0.0 0.0 19.70981681063927 0.0 27 1.1710378908826894E-4 0.0 0.0 20.157270388745545 0.0 28 1.1710378908826894E-4 0.0 0.0 20.620376839993288 0.0 29 1.1710378908826894E-4 0.0 0.0 21.132901090236277 0.0 30 1.1710378908826894E-4 0.0 0.0 21.688090154303758 0.0 31 1.5613838545102524E-4 0.0 0.0 22.190894790052422 0.0 32 1.5613838545102524E-4 0.0 0.0 22.68437015727039 0.0 33 1.5613838545102524E-4 0.0 0.0 23.157469465186995 0.0 34 1.5613838545102524E-4 0.0 0.0 23.61963908612203 0.0 35 1.5613838545102524E-4 0.0 0.0 24.08446305960973 0.0 36 1.9517298181378156E-4 0.0 0.0 24.546203299984775 0.0 37 2.3420757817653787E-4 0.0 0.0 25.02523586654852 0.0 38 2.3420757817653787E-4 0.0 0.0 25.49267515799253 0.0 39 2.3420757817653787E-4 0.0 0.0 25.96058286459289 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCGAC 20 7.034912E-4 45.0 9 CGTTTTT 46840 0.0 44.20741 1 CGTTATT 1320 0.0 42.954544 1 TACGGGA 210 0.0 42.857143 4 CTGCGCG 95 0.0 40.26316 1 GTCCGCG 45 1.9299478E-8 40.0 1 GTTTTTT 51975 0.0 39.896103 2 TTGTACG 85 0.0 39.705883 1 TAGTCCG 40 3.4604454E-7 39.375 1 ACGGGTA 155 0.0 39.193546 5 GCGATCG 150 0.0 39.000004 9 TACGGGT 280 0.0 38.571426 4 TTACGGG 650 0.0 37.730766 3 AGGGCGA 600 0.0 37.500004 6 CGACGGG 120 0.0 37.499996 3 TAGGGCG 395 0.0 37.025314 5 CGTTTCT 705 0.0 37.021275 1 CGTTTAT 630 0.0 36.785713 1 TTGCGCG 270 0.0 36.666664 1 TGGGCGA 3940 0.0 36.54822 6 >>END_MODULE