##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933216.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 332478 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.26384903662799 33.0 31.0 34.0 30.0 34.0 2 32.44698295827092 34.0 31.0 34.0 31.0 34.0 3 32.517315431396966 34.0 31.0 34.0 31.0 34.0 4 35.98092204596996 37.0 35.0 37.0 35.0 37.0 5 35.1964250266183 37.0 35.0 37.0 35.0 37.0 6 34.86517604172306 37.0 35.0 37.0 32.0 37.0 7 35.59429496086959 37.0 35.0 37.0 33.0 37.0 8 35.87393150825017 37.0 35.0 37.0 35.0 37.0 9 37.72912794229994 39.0 38.0 39.0 35.0 39.0 10 37.30183049705544 39.0 37.0 39.0 34.0 39.0 11 37.24351084883812 39.0 37.0 39.0 34.0 39.0 12 37.131310943882 39.0 37.0 39.0 34.0 39.0 13 37.099970524365524 39.0 37.0 39.0 33.0 39.0 14 38.305996186213825 40.0 38.0 41.0 33.0 41.0 15 38.39008295285703 40.0 38.0 41.0 34.0 41.0 16 38.3751135413471 40.0 38.0 41.0 34.0 41.0 17 38.32741414469529 40.0 38.0 41.0 34.0 41.0 18 38.26006833534851 40.0 37.0 41.0 34.0 41.0 19 38.26110900570865 40.0 37.0 41.0 34.0 41.0 20 38.185140069418125 40.0 37.0 41.0 34.0 41.0 21 38.0906676531981 40.0 37.0 41.0 34.0 41.0 22 38.097949338001314 40.0 37.0 41.0 34.0 41.0 23 38.008999091669224 40.0 37.0 41.0 33.0 41.0 24 37.94599041139564 40.0 37.0 41.0 33.0 41.0 25 37.828006665102656 40.0 36.0 41.0 33.0 41.0 26 37.7822863467658 40.0 36.0 41.0 33.0 41.0 27 37.73012951232864 40.0 36.0 41.0 33.0 41.0 28 37.62864911362556 40.0 36.0 41.0 33.0 41.0 29 37.54837011772207 40.0 36.0 41.0 33.0 41.0 30 37.461161339998434 40.0 36.0 41.0 33.0 41.0 31 37.39712101251812 40.0 36.0 41.0 32.0 41.0 32 37.34970734905768 40.0 36.0 41.0 32.0 41.0 33 37.22889935574685 39.0 36.0 41.0 32.0 41.0 34 37.10943882001215 39.0 35.0 41.0 32.0 41.0 35 36.96739032357028 39.0 35.0 41.0 31.0 41.0 36 36.84620335781616 39.0 35.0 41.0 31.0 41.0 37 36.793631458322054 39.0 35.0 41.0 31.0 41.0 38 36.69292404309458 39.0 35.0 41.0 31.0 41.0 39 36.62212537370894 39.0 35.0 41.0 31.0 41.0 40 36.52177286918232 39.0 35.0 41.0 30.0 41.0 41 36.40708257388459 39.0 35.0 41.0 30.0 41.0 42 36.316920217277534 39.0 35.0 41.0 30.0 41.0 43 36.17338590824055 39.0 35.0 40.0 30.0 41.0 44 36.0764952869062 38.0 35.0 40.0 30.0 41.0 45 36.06334253694981 38.0 35.0 40.0 30.0 41.0 46 35.882329056358614 38.0 35.0 40.0 29.0 41.0 47 35.808823440949475 38.0 35.0 40.0 29.0 41.0 48 35.700298967149706 38.0 35.0 40.0 29.0 41.0 49 35.728009071276894 38.0 35.0 40.0 29.0 41.0 50 35.534309036988915 38.0 34.0 40.0 28.0 41.0 51 34.482901124284915 37.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 3.0 10 13.0 11 7.0 12 13.0 13 4.0 14 9.0 15 14.0 16 21.0 17 51.0 18 93.0 19 164.0 20 270.0 21 426.0 22 688.0 23 963.0 24 1300.0 25 1902.0 26 2654.0 27 3122.0 28 3694.0 29 4276.0 30 5300.0 31 6889.0 32 8877.0 33 12212.0 34 20134.0 35 24979.0 36 28983.0 37 43335.0 38 70088.0 39 91947.0 40 45.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.518313993707856 4.270658509735982 53.97890988275916 17.232117613797005 2 21.18786806946625 4.234265124308976 52.51114359446339 22.06672321176138 3 21.3250200013234 4.252612202912674 52.03802958391231 22.384338211851613 4 18.917642671094026 4.996120044032989 50.93209174742389 25.154145537449097 5 17.28836193672965 7.786680622477276 50.06376361744236 24.861193823350717 6 22.279068088715643 7.619752284361672 52.940044153297364 17.161135473625322 7 83.54778361275031 2.097582396429237 9.774481319064721 4.580152671755725 8 85.83966457931052 2.6025782157014903 7.457937066512671 4.0998201384753274 9 79.86964551037964 5.459007814050854 9.40513357274767 5.26621310282184 10 36.80814971216141 28.921612858595154 17.34099699829763 16.929240430945807 11 28.624751111351728 25.18873429219377 25.58184300916151 20.604671587292994 12 25.755689098226046 21.41495076365955 32.3398841427102 20.48947599540421 13 23.970909353400828 21.872725413410812 33.35528967330169 20.80107555988667 14 21.23298383652452 24.619072540137992 31.762703096144705 22.385240527192778 15 19.77634610410313 23.56576976521755 34.11533996234337 22.54254416833595 16 22.028825967432432 22.308242951413327 32.04633088505104 23.616600196103203 17 22.32929697604052 21.8730261851912 30.043792371224566 25.75388446754372 18 23.005732710134204 21.938895205096276 30.7475983373336 24.30777374743592 19 24.154981682998574 23.768189173418993 29.16283182646671 22.91399731711572 20 26.678456920457894 23.312820697910837 28.447596532702917 21.56112584892835 21 26.676050746214784 23.443957194160213 27.795824084601083 22.08416797502391 22 24.767653799649903 23.447867227305267 27.08991271602933 24.694566257015502 23 23.81059799445377 24.634111129157418 27.279098165893682 24.27619271049513 24 24.087909575971945 23.24965862402926 28.564295983493643 24.098135816505152 25 23.55103194797851 24.45846040941055 27.116681404483906 24.873826238127034 26 23.23762775281372 24.96736626182785 27.495052304212606 24.29995368114582 27 22.930539765037086 23.993467236929963 28.647308994880866 24.42868400315209 28 22.004463453220964 24.41394618591305 28.961013961826044 24.620576399039937 29 22.681500730875428 24.72223726081124 28.202166759905918 24.394095248407414 30 23.94053140358159 23.803680243504832 28.6385866132496 23.61720173966398 31 23.40335300380777 25.935851394678743 26.71575262122607 23.94504298028742 32 23.301992913816854 25.787570906947227 26.46551049994285 24.444925679293068 33 24.056328539031156 24.703288638646768 27.167812607149948 24.07257021517213 34 22.61142090604491 23.99948267253773 28.25540336503468 25.13369305638268 35 23.259884864562466 24.186562719939364 27.83642827495353 24.717124140544637 36 24.75802910267747 24.89638412165617 27.167812607149948 23.177774168516414 37 23.975721701887043 26.13165382371164 27.111568284217302 22.781056190184014 38 22.70466015796534 25.89975878103213 27.297445244497382 24.098135816505152 39 23.201234367386714 25.4723620811001 28.00245429772797 23.323949253785212 40 23.24965862402926 23.897821810766427 30.122293805905954 22.73022575929836 41 21.46638273810598 24.139341550418372 29.001016608617714 25.393259102857936 42 23.211159836139533 24.321910021114178 27.28932440642689 25.177605736319396 43 23.683070759569055 23.837065911127954 27.880641726670635 24.599221602632355 44 23.00092036164799 23.964593146012668 28.191639747592323 24.84284674474702 45 23.221386076672744 23.55373889400201 27.745595197276213 25.47927983204904 46 22.450808775317466 24.263259523938427 29.42991716745168 23.856014533292427 47 21.614963997617885 25.01518897490962 29.488266892847047 23.881580134625448 48 21.46277347674132 23.862631512460975 29.51653944020356 25.158055570594147 49 22.444793339709694 23.709237904462853 29.840169875901562 24.00579887992589 50 21.873928500532365 23.580206810676195 29.01725828475869 25.52860640403275 51 21.245917023081226 23.32214462310288 28.394059155793766 27.037879198022125 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 66.0 1 197.5 2 329.0 3 1201.5 4 2074.0 5 1404.5 6 735.0 7 737.0 8 739.0 9 769.0 10 799.0 11 833.0 12 867.0 13 864.0 14 861.0 15 902.0 16 943.0 17 865.5 18 788.0 19 846.0 20 904.0 21 971.0 22 1038.0 23 1163.5 24 1289.0 25 1557.5 26 2231.5 27 2637.0 28 3246.5 29 3856.0 30 4292.5 31 4729.0 32 5565.5 33 6402.0 34 7351.5 35 8301.0 36 8929.0 37 9557.0 38 10377.0 39 11197.0 40 12448.0 41 13699.0 42 15166.5 43 16634.0 44 18321.0 45 20008.0 46 22291.0 47 24574.0 48 27827.0 49 31080.0 50 30193.0 51 29306.0 52 26595.0 53 23884.0 54 21980.0 55 20076.0 56 19638.0 57 19200.0 58 18725.5 59 18251.0 60 16787.5 61 15324.0 62 13938.0 63 12552.0 64 11032.0 65 9512.0 66 8123.5 67 6735.0 68 5516.5 69 4298.0 70 3647.5 71 2997.0 72 2401.0 73 1805.0 74 1513.5 75 962.0 76 702.0 77 519.5 78 337.0 79 271.5 80 206.0 81 150.0 82 94.0 83 57.5 84 21.0 85 17.5 86 14.0 87 10.5 88 7.0 89 4.0 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 332478.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.12588393576035 #Duplication Level Percentage of deduplicated Percentage of total 1 69.63320950309426 31.422601301111165 2 8.564086094679183 7.729239102487038 3 5.254067998304066 7.112833880461859 4 4.101623723641899 7.403575844049022 5 3.2967494876756334 7.4384367373064 6 2.579303928631251 6.983602183107871 7 2.0046409205770566 6.332283546038522 8 1.4274186906248612 5.1530824128698 9 0.9949651579360647 4.040881401343349 >10 2.083794197299765 12.423605166393353 >50 0.03942530616242125 1.2242632656728794 >100 0.017373863732592417 1.3472926775927156 >500 0.0013364510563532628 0.41371655184807654 >1k 0.002004676584529894 0.9745859297179178 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1124 0.338067481156648 No Hit CTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCGTCTTCTGCT 1103 0.33175127376848995 No Hit TCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCGTCTTCTGC 1005 0.3022756392904192 No Hit GCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCGTCTTCTGC 757 0.22768423775407698 No Hit CCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCGTCTTCTGC 615 0.18497464493891325 No Hit TCCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCGTCTTCTG 345 0.10376626423402449 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3519029830545179 0.0 2 0.0 0.0 0.0 1.1414289065742695 0.0 3 0.0 0.0 0.0 1.6635687173286653 0.0 4 0.0 0.0 0.0 2.3348913311557458 0.0 5 0.0 0.0 0.0 3.248635999975938 0.0 6 0.0 0.0 0.0 3.9028146223208755 0.0 7 0.0 0.0 0.0 4.465859395208104 0.0 8 0.0 0.0 0.0 5.262303069676791 0.0 9 0.0 0.0 0.0 5.813016199568092 0.0 10 0.0 0.0 0.0 6.601639807746678 0.0 11 0.0 0.0 0.0 7.886536853566251 0.0 12 3.0077178038847685E-4 0.0 0.0 8.884497620895218 0.0 13 3.0077178038847685E-4 0.0 0.0 9.244220670239836 0.0 14 3.0077178038847685E-4 0.0 0.0 9.384981863461643 0.0 15 3.0077178038847685E-4 0.0 0.0 9.589506674125808 0.0 16 3.0077178038847685E-4 0.0 0.0 10.093600178056894 0.0 17 3.0077178038847685E-4 0.0 0.0 10.817557853451957 0.0 18 3.0077178038847685E-4 0.0 0.0 11.604376830948214 0.0 19 3.0077178038847685E-4 0.0 0.0 12.069971546989576 0.0 20 3.0077178038847685E-4 0.0 0.0 12.54458941644259 0.0 21 3.0077178038847685E-4 0.0 0.0 13.058006845565721 0.0 22 6.015435607769537E-4 0.0 0.0 13.59729064780226 0.0 23 6.015435607769537E-4 0.0 0.0 14.110407305145001 0.0 24 6.015435607769537E-4 0.0 0.0 14.519156154692942 0.0 25 9.023153411654305E-4 0.0 0.0 14.868652963504353 0.0 26 9.023153411654305E-4 0.0 0.0 15.19679497590818 0.0 27 9.023153411654305E-4 0.0 0.0 15.526440847213951 0.0 28 9.023153411654305E-4 0.0 0.0 15.853680544276614 0.0 29 9.023153411654305E-4 0.0 0.0 16.18994339475093 0.0 30 9.023153411654305E-4 0.0 0.0 16.584856742401 0.0 31 9.023153411654305E-4 0.0 0.0 16.961122239666985 0.0 32 9.023153411654305E-4 0.0 0.0 17.29197119809431 0.0 33 9.023153411654305E-4 0.0 0.0 17.6315425381529 0.0 34 9.023153411654305E-4 0.0 0.0 18.015628101708984 0.0 35 9.023153411654305E-4 0.0 0.0 18.384675076245646 0.0 36 9.023153411654305E-4 0.0 0.0 18.730863395472785 0.0 37 9.023153411654305E-4 0.0 0.0 19.079758660723417 0.0 38 9.023153411654305E-4 0.0 0.0 19.42624775173094 0.0 39 9.023153411654305E-4 0.0 0.0 19.776646875883518 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTATGCG 20 7.0260465E-4 45.0 1 TACGGGA 95 0.0 45.0 4 GCGATGA 20 7.0260465E-4 45.0 9 TTACGGG 85 0.0 42.35294 3 ACGGGAC 60 3.6379788E-12 41.249996 5 TATGGGA 150 0.0 40.500004 4 TATCGGG 50 1.0768417E-9 40.500004 3 CGAATAT 45 1.9212166E-8 40.0 14 GCCGATT 80 0.0 39.375 9 CTACGGG 40 3.4483492E-7 39.375 3 TTTGGGC 960 0.0 38.67187 4 CGGGATA 35 6.234899E-6 38.57143 6 TGGGCGA 600 0.0 38.250004 6 TTTGGGA 1800 0.0 38.25 4 TTGGGAC 730 0.0 37.910957 5 GCGATCT 155 0.0 37.741936 9 TAACGGG 30 1.1381775E-4 37.499996 3 GGGCGAT 895 0.0 36.955307 7 GTGGCGT 55 2.737579E-9 36.81818 34 GGCGATG 325 0.0 36.692307 8 >>END_MODULE