##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933214.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2952375 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.03379076167492 33.0 31.0 34.0 30.0 34.0 2 32.26492196960074 34.0 31.0 34.0 30.0 34.0 3 32.242306617553666 33.0 31.0 34.0 30.0 34.0 4 35.86300520767179 37.0 35.0 37.0 35.0 37.0 5 35.0751706676828 37.0 35.0 37.0 35.0 37.0 6 34.83309708285702 37.0 35.0 37.0 32.0 37.0 7 35.635649265421904 37.0 35.0 37.0 33.0 37.0 8 35.881749777721325 37.0 35.0 37.0 35.0 37.0 9 37.74017629874254 39.0 38.0 39.0 35.0 39.0 10 37.1953976036242 39.0 37.0 39.0 34.0 39.0 11 37.16536822050045 39.0 37.0 39.0 34.0 39.0 12 37.173581269317076 39.0 37.0 39.0 34.0 39.0 13 37.20764875735637 39.0 37.0 39.0 34.0 39.0 14 38.40370244294847 40.0 38.0 41.0 34.0 41.0 15 38.44902934078496 40.0 38.0 41.0 34.0 41.0 16 38.41819314958296 40.0 38.0 41.0 34.0 41.0 17 38.34314170794699 40.0 38.0 41.0 34.0 41.0 18 38.15672162242262 39.0 38.0 41.0 33.0 41.0 19 38.0053140268428 39.0 37.0 41.0 34.0 41.0 20 37.76615301240527 39.0 35.0 41.0 34.0 41.0 21 37.651376942292224 39.0 35.0 41.0 33.0 41.0 22 37.70795579829798 39.0 35.0 41.0 33.0 41.0 23 37.62717134510352 39.0 35.0 41.0 33.0 41.0 24 37.55742309157881 39.0 35.0 41.0 33.0 41.0 25 37.45612566154367 39.0 35.0 41.0 33.0 41.0 26 37.424283839281934 39.0 35.0 41.0 33.0 41.0 27 37.39777806003641 39.0 35.0 41.0 33.0 41.0 28 37.29389423769 39.0 35.0 41.0 33.0 41.0 29 37.197757059994075 39.0 35.0 41.0 33.0 41.0 30 37.035310555061606 39.0 35.0 41.0 32.0 41.0 31 36.84401744358355 39.0 35.0 41.0 31.0 41.0 32 36.57578288665905 39.0 35.0 41.0 30.0 41.0 33 36.136694017528264 39.0 35.0 41.0 29.0 41.0 34 35.749289639696855 39.0 35.0 41.0 26.0 41.0 35 35.46426250052924 39.0 35.0 41.0 24.0 41.0 36 35.28539667217071 39.0 35.0 41.0 23.0 41.0 37 35.238214996401204 39.0 35.0 41.0 23.0 41.0 38 35.1697850035988 39.0 35.0 41.0 23.0 41.0 39 35.09202658876328 39.0 35.0 40.0 22.0 41.0 40 35.0049820906897 39.0 35.0 40.0 22.0 41.0 41 34.87111359498709 39.0 35.0 40.0 21.0 41.0 42 34.79044972268089 39.0 34.0 40.0 21.0 41.0 43 34.67564316863542 38.0 34.0 40.0 20.0 41.0 44 34.61803293958254 38.0 34.0 40.0 19.0 41.0 45 34.64932063169482 38.0 34.0 40.0 20.0 41.0 46 34.44620585122147 38.0 34.0 40.0 19.0 41.0 47 34.379644184766505 38.0 34.0 40.0 19.0 41.0 48 34.28527372030992 38.0 34.0 40.0 18.0 41.0 49 34.35560794275795 38.0 34.0 40.0 19.0 41.0 50 34.168920276048944 38.0 34.0 40.0 18.0 41.0 51 33.19779736652695 37.0 32.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 16.0 10 18.0 11 24.0 12 22.0 13 34.0 14 26.0 15 69.0 16 131.0 17 326.0 18 825.0 19 1831.0 20 3330.0 21 5483.0 22 8717.0 23 14577.0 24 25606.0 25 46660.0 26 66697.0 27 65500.0 28 56093.0 29 50935.0 30 53825.0 31 63097.0 32 78990.0 33 103468.0 34 153896.0 35 201605.0 36 247237.0 37 361699.0 38 606501.0 39 734927.0 40 205.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.343494644142428 3.955425716584106 51.129311147804735 23.571768491468735 2 28.131961556374108 4.596197976205597 46.359727338159956 20.91211312926034 3 16.67294974385029 4.658893263897709 57.123299038909344 21.544857953342646 4 15.120199839112578 3.875794910876836 57.64206782674965 23.361937423260933 5 15.135712773614463 6.932215589144334 56.376374952368856 21.55569668487235 6 17.597595156441848 7.04504001016131 58.8989881027986 16.45837673059825 7 72.9747406748804 1.4499513103857065 20.43287184046742 5.14243617426648 8 74.9097252212202 2.1959947499894152 17.628248444049284 5.266031584741098 9 68.64839324272832 4.451907362716457 20.312866759812014 6.586832634743216 10 30.62490367924129 20.488454210593165 30.767162030568613 18.119480079596933 11 22.751615225030697 23.91488208645582 33.429391591515305 19.90411109699818 12 17.980676573944706 20.48337355518862 40.60663025530293 20.92931961556374 13 18.59187941911173 21.015182691900588 42.45724205089123 17.935695838096446 14 17.496998179431813 23.551513611922605 40.417562132181715 18.533926076463864 15 16.14225835132732 23.96982090689699 41.53239341208349 18.355527329692197 16 16.405605656463017 23.10776916888945 39.84903679241289 20.637588382234643 17 16.845454930352684 24.4200008467759 37.55322409924213 21.181320123629284 18 17.6452517041365 23.47550700707058 38.01542825691181 20.86381303188111 19 18.446945255938015 26.41690164697913 35.38165036623057 19.75450273085228 20 19.459994072568694 25.38989796350396 35.666167068885215 19.483940895042124 21 19.473982810449215 26.164968880985644 35.52045387188281 18.84059443668233 22 18.33859181167704 23.801244760574114 35.16856767856387 22.691595749184977 23 17.68054532368009 24.949032558533386 34.582361657987214 22.788060459799315 24 18.2836868622719 23.853236800880648 35.769439857741645 22.093636479105804 25 18.2713916761929 25.67620983106821 33.86168762437021 22.190710868368686 26 17.93478132012363 26.06630255302934 34.88140903509886 21.11750709174817 27 18.857326728481308 24.336508742961175 35.03223675854185 21.773927770015668 28 17.988094330835345 23.93398535077692 35.30774376561243 22.770176552775307 29 18.072026758118465 23.47388119734112 34.19528345823278 24.258808586307634 30 18.45399043143232 24.42643634362166 34.37358059189635 22.745992633049664 31 17.184334645835982 25.379906007875014 32.804369363647915 24.631389982641096 32 16.47710741352301 25.202963715652654 32.223379482619926 26.09654938820441 33 17.079707015538336 23.93859181167704 32.005554849908975 26.97614632287565 34 16.226427875862655 25.369676954993857 30.448842033955714 27.955053135187775 35 15.962572505186504 25.823989161268468 30.168288242516617 28.045150091028408 36 16.48554130149456 25.790931030102882 30.83802023794403 26.885507430458528 37 16.12508573605995 26.14373174139464 32.27848765824125 25.45269486430416 38 16.61381091494136 24.850095262288836 30.97157373301156 27.564520089758243 39 17.99175240272662 24.157635801685085 31.213887124772427 26.63672467081587 40 18.70436512976841 24.91529700664719 31.52678775562047 24.85355010796393 41 17.26318641771455 25.72975993903214 31.92826114568779 25.078792497565523 42 18.318878868707397 25.247233159744276 32.74628053685592 23.68760743469241 43 18.92554299504636 23.825699648588 33.71143570853973 23.537321647825905 44 19.193022566577756 24.03319361530971 30.904678436851686 25.869105381260848 45 19.553782971336638 23.42954401117744 29.88709090139295 27.129582116092976 46 19.96324992590711 24.13324865574326 30.198568948727715 25.704932469621916 47 18.140784961260003 24.29935221643592 32.14232609339938 25.417536728904693 48 17.74005673398535 23.171785426986748 32.4674880392904 26.620669799737502 49 18.618027858927135 21.92976840679114 33.03459079554596 26.41761293873576 50 18.143460773106398 21.475456200516533 32.629052881155005 27.75203014522207 51 17.060874719505485 21.426139972056397 31.610720182903595 29.902265125534527 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 315.0 1 1134.0 2 1953.0 3 31787.5 4 61622.0 5 42506.5 6 23391.0 7 23708.5 8 24026.0 9 24682.5 10 25339.0 11 25608.0 12 25877.0 13 25791.5 14 25706.0 15 25173.5 16 24641.0 17 23842.0 18 23043.0 19 22724.0 20 22405.0 21 21628.5 22 20852.0 23 21475.5 24 22099.0 25 22844.0 26 25863.0 27 28137.0 28 31344.0 29 34551.0 30 39397.5 31 44244.0 32 50838.0 33 57432.0 34 66012.0 35 74592.0 36 84088.5 37 93585.0 38 102858.5 39 112132.0 40 126376.5 41 140621.0 42 158661.5 43 176702.0 44 201983.5 45 227265.0 46 281660.5 47 336056.0 48 344549.5 49 353043.0 50 325464.5 51 297886.0 52 246433.5 53 194981.0 54 163217.5 55 131454.0 56 112637.0 57 93820.0 58 82642.5 59 71465.0 60 63033.5 61 54602.0 62 45530.0 63 36458.0 64 30778.0 65 25098.0 66 20685.0 67 16272.0 68 13284.0 69 10296.0 70 8335.0 71 6374.0 72 5349.5 73 4325.0 74 3624.0 75 2307.5 76 1692.0 77 1220.5 78 749.0 79 612.5 80 476.0 81 344.0 82 212.0 83 125.5 84 39.0 85 28.5 86 18.0 87 13.0 88 8.0 89 5.5 90 3.0 91 3.0 92 3.0 93 3.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2952375.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.181862076400805 #Duplication Level Percentage of deduplicated Percentage of total 1 75.77546103802254 28.932482021294593 2 9.468681860473055 7.230638096838006 3 3.4801153042348307 3.986318476687978 4 1.8717772281111753 2.8587175984595476 5 1.2946834503693871 2.4716712467301316 6 0.9994601997220736 2.289675089798412 7 0.8345779698921625 2.230601865689759 8 0.667953244267842 2.0402958916895355 9 0.6079050329532194 2.0889851511392736 >10 4.819824364786863 30.959925266709508 >50 0.1122189447180551 2.977251290168749 >100 0.05837925043072848 4.13215331640724 >500 0.005108403850263551 1.3134283567278904 >1k 0.0027782547255705134 2.17407074006929 >5k 8.962112017969399E-4 2.6617258871830782 >10k+ 1.7924224035938797E-4 1.6520597044071716 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 37914 1.2841864600533468 No Hit CTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCTGCT 10365 0.3510732884542106 No Hit CGTTTCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTT 9766 0.3307845378720522 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCT 9045 0.30636352089419533 No Hit CGTTCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTC 8734 0.2958296286887675 No Hit CCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCTGC 8611 0.29166349125703883 No Hit GAATCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTC 7873 0.26666666666666666 No Hit TCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCTGC 7828 0.2651424700453025 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCC 7604 0.257555357974512 No Hit GCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCTGC 7254 0.24570049536390193 No Hit CGTCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCT 5867 0.1987213683898556 No Hit CGCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCTG 5203 0.17623100046572673 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTC 4834 0.16373258817054065 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCG 4370 0.1480164274524747 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGC 4328 0.1465938439392015 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGT 4054 0.1373131800668953 No Hit TCCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCTG 3549 0.12020830687158644 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCG 3277 0.11099538507134087 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGC 3158 0.10696473178373343 No Hit TTCCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCT 3142 0.1064227952072484 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.7258139633346033E-4 0.0 0.0 0.3929717600237097 0.0 2 3.7258139633346033E-4 0.0 0.0 1.3146026504085693 0.0 3 3.7258139633346033E-4 0.0 0.0 2.034700876413057 0.0 4 3.7258139633346033E-4 0.0 0.0 3.1178966086625173 0.0 5 4.064524323637749E-4 0.0 0.0 5.062060205766544 0.0 6 4.064524323637749E-4 0.0 0.0 7.284474363859604 0.0 7 4.064524323637749E-4 0.0 0.0 9.067208603243152 0.0 8 4.064524323637749E-4 0.0 0.0 11.246030737965198 0.0 9 4.064524323637749E-4 0.0 0.0 12.604597993141116 0.0 10 4.064524323637749E-4 0.0 0.0 14.400643549684576 0.0 11 4.064524323637749E-4 0.0 0.0 16.617875439265 0.0 12 4.064524323637749E-4 0.0 0.0 18.52708412718574 0.0 13 4.064524323637749E-4 0.0 0.0 19.29880181210043 0.0 14 4.064524323637749E-4 0.0 0.0 19.62206697997375 0.0 15 4.064524323637749E-4 0.0 0.0 19.95566281383632 0.0 16 4.064524323637749E-4 0.0 0.0 20.571438248867437 0.0 17 4.064524323637749E-4 0.0 0.0 21.43426902070367 0.0 18 4.064524323637749E-4 0.0 0.0 22.39336127693806 0.0 19 4.064524323637749E-4 0.0 0.0 23.07088361065244 0.0 20 4.064524323637749E-4 0.0 0.0 23.735196240315002 0.0 21 4.064524323637749E-4 0.0 0.0 24.610796392734663 0.0 22 4.064524323637749E-4 0.0 0.0 25.55058215843177 0.0 23 4.064524323637749E-4 0.0 0.0 26.482611456877937 0.0 24 4.064524323637749E-4 0.0 0.0 27.21209195986282 0.0 25 4.064524323637749E-4 0.0 0.0 27.859333587366102 0.0 26 4.064524323637749E-4 0.0 0.0 28.42105084889284 0.0 27 4.064524323637749E-4 0.0 0.0 28.987950378932215 0.0 28 4.064524323637749E-4 0.0 0.0 29.586485456623905 0.0 29 4.064524323637749E-4 0.0 0.0 30.216723824039967 0.0 30 4.064524323637749E-4 0.0 0.0 30.907489732842205 0.0 31 4.064524323637749E-4 0.0 0.0 31.543858757779752 0.0 32 4.064524323637749E-4 0.0 0.0 32.18039713789746 0.0 33 4.064524323637749E-4 0.0 0.0 32.78529997036284 0.0 34 4.064524323637749E-4 0.0 0.0 33.38038020237944 0.0 35 4.064524323637749E-4 0.0 0.0 33.996799187095135 0.0 36 4.064524323637749E-4 0.0 0.0 34.590118125238156 0.0 37 4.064524323637749E-4 0.0 0.0 35.19403869765866 0.0 38 4.403234683940895E-4 0.0 0.0 35.80517380075363 0.0 39 4.403234683940895E-4 0.0 0.0 36.39232821033914 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 31455 0.0 43.91273 1 CGTTATT 845 0.0 43.668636 1 GTTTTTT 35260 0.0 39.110184 2 CGTTTCT 1265 0.0 38.774704 1 TTGGGAC 4875 0.0 37.892307 5 TTACGGG 740 0.0 37.702705 3 TGGGACG 400 0.0 37.687504 6 CGTTTTC 1215 0.0 37.59259 1 CGTTTAT 485 0.0 37.1134 1 GCGATCG 195 0.0 36.92308 9 TGGGCGA 4490 0.0 36.88196 6 TTTGGGC 9615 0.0 36.856476 4 AGGGCGA 505 0.0 36.53465 6 TCGTTTG 1030 0.0 36.480583 1 TCTAGCG 105 0.0 36.42857 1 TTGGGCG 3995 0.0 36.214016 5 ACACGAC 305 0.0 36.147537 26 TCAAGCG 330 0.0 36.136364 17 CGTTTGG 1860 0.0 36.048386 2 TTCCGCA 25 0.0021076426 36.000004 1 >>END_MODULE