##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933212.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2450367 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.24611374541038 33.0 31.0 34.0 30.0 34.0 2 32.45452905625974 34.0 31.0 34.0 31.0 34.0 3 32.48298765042134 34.0 31.0 34.0 30.0 34.0 4 35.98548421522164 37.0 35.0 37.0 35.0 37.0 5 35.2032226193056 37.0 35.0 37.0 35.0 37.0 6 34.919310454311535 37.0 35.0 37.0 32.0 37.0 7 35.69746899137966 37.0 35.0 37.0 35.0 37.0 8 35.977751904102526 37.0 35.0 37.0 35.0 37.0 9 37.85688225478061 39.0 38.0 39.0 35.0 39.0 10 37.38949879752706 39.0 37.0 39.0 35.0 39.0 11 37.305488116678035 39.0 37.0 39.0 34.0 39.0 12 37.05439552524173 39.0 37.0 39.0 33.0 39.0 13 36.970167734057796 39.0 37.0 39.0 33.0 39.0 14 37.95888819919628 40.0 37.0 41.0 33.0 41.0 15 38.071202803498416 40.0 37.0 41.0 33.0 41.0 16 38.11040754303335 40.0 37.0 41.0 33.0 41.0 17 38.054638346011025 40.0 37.0 41.0 33.0 41.0 18 37.96872509301668 40.0 37.0 41.0 33.0 41.0 19 37.909611499012186 40.0 37.0 41.0 33.0 41.0 20 37.75706332969715 40.0 35.0 41.0 33.0 41.0 21 37.62320134086037 39.0 35.0 41.0 33.0 41.0 22 37.70713162558915 39.0 35.0 41.0 33.0 41.0 23 37.64877016381628 39.0 35.0 41.0 33.0 41.0 24 37.58924969198492 39.0 35.0 41.0 33.0 41.0 25 37.481149150310955 39.0 35.0 41.0 33.0 41.0 26 37.42913204430194 39.0 35.0 41.0 33.0 41.0 27 37.39282891093457 39.0 35.0 41.0 33.0 41.0 28 37.284923442080306 39.0 35.0 41.0 33.0 41.0 29 37.18150546428351 39.0 35.0 41.0 33.0 41.0 30 37.03447932493378 39.0 35.0 41.0 32.0 41.0 31 36.86071719052697 39.0 35.0 41.0 31.0 41.0 32 36.71377634452308 39.0 35.0 41.0 31.0 41.0 33 36.46303145610433 39.0 35.0 41.0 31.0 41.0 34 36.170747483948325 39.0 35.0 41.0 30.0 41.0 35 35.94329992201168 39.0 35.0 41.0 29.0 41.0 36 35.80538098986805 38.0 35.0 40.0 29.0 41.0 37 35.79939658018574 38.0 35.0 40.0 29.0 41.0 38 35.69166414663599 38.0 35.0 40.0 29.0 41.0 39 35.638272960744246 38.0 35.0 40.0 28.0 41.0 40 35.53601358490381 38.0 35.0 40.0 27.0 41.0 41 35.39163806890968 38.0 35.0 40.0 27.0 41.0 42 35.28866737105095 38.0 34.0 40.0 26.0 41.0 43 35.16054207390158 38.0 34.0 40.0 26.0 41.0 44 35.08471996235666 38.0 34.0 40.0 26.0 41.0 45 35.05252927418628 37.0 34.0 40.0 26.0 41.0 46 34.88608685964184 37.0 34.0 40.0 25.0 41.0 47 34.78850270184017 37.0 34.0 40.0 25.0 41.0 48 34.70849754342921 37.0 34.0 40.0 25.0 41.0 49 34.74893475140663 37.0 34.0 40.0 26.0 41.0 50 34.5746718756823 37.0 34.0 40.0 24.0 41.0 51 33.582333585132346 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 21.0 10 63.0 11 53.0 12 37.0 13 31.0 14 58.0 15 108.0 16 161.0 17 347.0 18 677.0 19 1202.0 20 2245.0 21 3616.0 22 5737.0 23 8732.0 24 14124.0 25 23317.0 26 33055.0 27 37616.0 28 38919.0 29 40803.0 30 46931.0 31 57563.0 32 73970.0 33 105991.0 34 177844.0 35 193918.0 36 213332.0 37 307087.0 38 483521.0 39 579058.0 40 224.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.545983111917522 4.248832929924375 53.02891362804021 19.176270330117898 2 24.515715400999117 4.09150955754791 48.97474541568671 22.418029625766263 3 20.349237481569087 4.158846409537836 52.77646164839798 22.715454460495103 4 18.11569450616989 4.629918701974031 52.40161983898738 24.852766952868695 5 17.48660506773067 7.608941844221702 51.19735125391421 23.707101834133418 6 21.849420923477993 7.065431423129678 53.28177370981572 17.803373943576613 7 81.27264201648161 1.8414384457511874 12.779718303421486 4.106201234345712 8 83.64138922863391 2.1080107592046415 10.694316402400132 3.5562836097613135 9 78.15319093017496 4.250710199737427 12.858890117276308 4.737208752811314 10 38.958490707718475 26.167182303712057 19.69288682062728 15.18144016794219 11 32.45595455701126 22.267276697735483 26.68286015931491 18.59390858593835 12 26.706938185177975 21.2221679446385 32.33013666932341 19.740757200860116 13 25.134561475893204 20.632337931420068 34.988391534819065 19.24470905786766 14 21.540079506457605 21.37300249309593 36.97650188726831 20.110416113178147 15 20.578386829401474 20.04667055996102 37.85294202868387 21.522000581953645 16 24.839544443750672 20.904501244099354 33.64883709256613 20.60711721958384 17 23.87858635053443 21.017872016722393 33.0864315427036 22.017110090039573 18 25.806052725979416 19.50030342393609 33.30468456357762 21.38895928650688 19 24.386306214538475 23.321200456911146 30.638675757549787 21.653817571000587 20 26.07189045559298 25.396277373960718 29.372375648219222 19.159456522227078 21 25.593757996251178 24.874518796572108 30.41393391275674 19.11778929441998 22 23.937149006659002 21.54762939592314 31.73034896405314 22.784872633364717 23 22.479122515117123 23.80941303894478 31.610162885804456 22.101301560133646 24 22.276989528507364 23.27994133123732 32.08327568890701 22.35979345134831 25 24.13699662132244 24.2141279245109 28.83433379571305 22.81454165845361 26 22.373872974946202 23.39110835234069 29.871158075504606 24.3638605972085 27 21.901494755683537 21.953731828742388 31.934767322609225 24.21000609296485 28 20.199096706738214 24.739600231312288 30.45294847669757 24.608354585251924 29 22.526095070656762 24.8135075276479 29.32385230457315 23.336545097122187 30 24.96560719271848 22.99006638597402 30.72870308814965 21.31562333315785 31 25.227486331639305 24.64108437634036 28.514912256000834 21.616517036019502 32 25.54180659468561 24.29966613164477 27.809466908426373 22.349060365243247 33 25.289395425256707 24.64447162404652 26.869934177206922 23.196198773489847 34 23.336953199255458 25.171984441514272 29.6397233557259 21.85133900350437 35 22.69472287212487 27.886271729908213 28.050900130470254 21.368105267496666 36 24.637778749060853 29.185383250753866 25.439291338807617 20.737546661377664 37 24.516654035905642 27.21441318790206 25.723452854205103 22.545479921987198 38 24.66777425585637 26.46526010185413 27.46241685429162 21.40454878799788 39 24.627045662955794 23.8217377233696 27.01309640555884 24.538120208115764 40 26.299284964252294 22.911261864039144 28.13015356475173 22.659299606956836 41 22.201449823638665 24.037215649737366 28.01992517855489 25.741409348069084 42 22.826417430531833 24.425769690825906 29.312303014201547 23.435509864440714 43 22.421253632619116 22.985822123787987 30.300114227787102 24.292810015805795 44 23.91184667439612 23.59593481303005 28.414519131215854 24.077699381357974 45 23.693756894375415 23.150940246909954 27.28787157189107 25.867431286823567 46 22.83751780855684 23.642295215369778 28.184063856556996 25.336123119516387 47 20.913479491031346 25.90477263201798 29.99220116823317 23.189546708717508 48 22.05722652974024 25.31282048770653 29.28487855084565 23.345074431707577 49 23.706204009440217 23.71648818319868 29.111639195271565 23.465668612089534 50 22.096404334534377 24.089493533009545 28.832660576966635 24.981441555489443 51 21.32264268985013 22.80311479872199 28.564986387753343 27.309256123674537 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 403.0 1 1620.5 2 2838.0 3 23102.0 4 43366.0 5 28121.0 6 12876.0 7 12383.0 8 11890.0 9 12004.5 10 12119.0 11 11914.5 12 11710.0 13 11497.5 14 11285.0 15 10863.0 16 10441.0 17 10139.0 18 9837.0 19 9620.0 20 9403.0 21 9182.5 22 8962.0 23 10107.0 24 11252.0 25 12095.5 26 15646.5 27 18354.0 28 20800.0 29 23246.0 30 26558.5 31 29871.0 32 33950.5 33 38030.0 34 45397.0 35 52764.0 36 56807.5 37 60851.0 38 66560.5 39 72270.0 40 78377.5 41 84485.0 42 93889.0 43 103293.0 44 116051.5 45 128810.0 46 151254.5 47 173699.0 48 200274.5 49 226850.0 50 228159.0 51 229468.0 52 215785.0 53 202102.0 54 186969.5 55 171837.0 56 159541.5 57 147246.0 58 137794.5 59 128343.0 60 117170.5 61 105998.0 62 93987.0 63 81976.0 64 74070.0 65 66164.0 66 57044.0 67 47924.0 68 40038.0 69 32152.0 70 26408.5 71 20665.0 72 17007.0 73 13349.0 74 11765.5 75 8045.5 76 5909.0 77 4442.0 78 2975.0 79 2180.0 80 1385.0 81 963.5 82 542.0 83 367.5 84 193.0 85 129.5 86 66.0 87 47.0 88 28.0 89 21.0 90 14.0 91 8.5 92 3.0 93 2.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2450367.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.305695060597913 #Duplication Level Percentage of deduplicated Percentage of total 1 74.05155291493412 21.701322284887897 2 9.383112706190284 5.499572793736681 3 3.4246606218306836 3.0108617960822293 4 1.8762442742027572 2.1993857023591543 5 1.1827363345180926 1.7330455178238273 6 0.8878868359272069 1.5612084517201112 7 0.6590754894981249 1.3520265722002445 8 0.5720373582328905 1.3411161906914477 9 0.53904115550149 1.4217278155415105 >10 7.035404423388461 46.58957642869522 >50 0.2957883534569473 5.462421166211455 >100 0.08505257284349754 4.64816576577503 >500 0.004130804322828052 0.8028523497775328 >1k 0.0031337136242143844 1.5876297727389859 >5k 0.0 0.0 >10k+ 1.424415283733811E-4 1.0890873917587394 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 26090 1.0647384657073817 No Hit CTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTCTGCT 3429 0.13993822149906524 Illumina Single End Adapter 2 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTCTGC 2783 0.11357482368967588 No Hit TCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTCTGC 2517 0.1027193069446332 No Hit GCGCGCGGGAGAAACAAGCGAGATAGGAATGTCTTACACGCGGGGCAAGAC 2483 0.10133175969150743 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.26481706617825E-4 0.0 0.0 0.14761054160458412 0.0 2 3.26481706617825E-4 0.0 0.0 0.4930689974195702 0.0 3 3.26481706617825E-4 0.0 0.0 0.8284473305427309 0.0 4 3.26481706617825E-4 0.0 0.0 1.2291220049894567 0.0 5 3.26481706617825E-4 0.0 0.0 1.9990882998342698 0.0 6 3.26481706617825E-4 0.0 0.0 3.027056763333819 0.0 7 3.26481706617825E-4 0.0 0.0 3.885581221098717 0.0 8 3.26481706617825E-4 0.0 0.0 5.103521227636513 0.0 9 3.26481706617825E-4 0.0 0.0 6.037422149416802 0.0 10 3.26481706617825E-4 0.0 0.0 7.214592752840697 0.0 11 3.26481706617825E-4 0.0 0.0 8.709838158937009 0.0 12 3.26481706617825E-4 0.0 0.0 9.84717799415353 0.0 13 3.26481706617825E-4 0.0 0.0 10.283439174621597 0.0 14 3.26481706617825E-4 0.0 0.0 10.541033241143062 0.0 15 3.26481706617825E-4 0.0 0.0 10.766101567642725 0.0 16 3.26481706617825E-4 0.0 0.0 11.143596040919585 0.0 17 3.26481706617825E-4 0.0 0.0 11.660702253988893 0.0 18 3.26481706617825E-4 0.0 0.0 12.23008635033038 0.0 19 3.26481706617825E-4 0.0 0.0 12.620884953151915 0.0 20 3.26481706617825E-4 0.0 0.0 13.080652816496467 0.0 21 3.26481706617825E-4 0.0 0.0 13.660729188729688 0.0 22 3.26481706617825E-4 0.0 0.0 14.294756662981504 0.0 23 3.26481706617825E-4 0.0 0.0 14.894585178465103 0.0 24 3.26481706617825E-4 0.0 0.0 15.382226417512152 0.0 25 3.26481706617825E-4 0.0 0.0 15.828037187898792 0.0 26 3.26481706617825E-4 0.0 0.0 16.210632937841556 0.0 27 3.26481706617825E-4 0.0 0.0 16.62726440569923 0.0 28 3.6729191994505314E-4 0.0 0.0 17.041039158623995 0.0 29 3.6729191994505314E-4 0.0 0.0 17.517865691139328 0.0 30 3.6729191994505314E-4 0.0 0.0 18.148914019818257 0.0 31 3.6729191994505314E-4 0.0 0.0 18.58125741980691 0.0 32 3.6729191994505314E-4 0.0 0.0 19.06183849194835 0.0 33 3.6729191994505314E-4 0.0 0.0 19.526544391105496 0.0 34 3.6729191994505314E-4 0.0 0.0 20.011981878632874 0.0 35 3.6729191994505314E-4 0.0 0.0 20.617074911635687 0.0 36 3.6729191994505314E-4 0.0 0.0 21.11361277718807 0.0 37 3.6729191994505314E-4 0.0 0.0 21.590888222050005 0.0 38 4.0810213327228126E-4 0.0 0.0 22.189165949427167 0.0 39 4.489123465995094E-4 0.0 0.0 23.126780600620233 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 14280 0.0 43.04622 1 CTTACGG 250 0.0 38.699997 2 CGTTATT 320 0.0 38.671875 1 ACATACG 270 0.0 37.5 17 AGGCACG 590 0.0 37.372883 10 TTTGGGA 10840 0.0 37.237083 4 ACGACCA 2205 0.0 37.040817 28 TACGGGA 560 0.0 36.964283 4 CATACGA 275 0.0 36.818184 18 ATACGAA 275 0.0 36.818184 19 CACGACC 2230 0.0 36.72646 27 AACACGT 1975 0.0 36.683544 41 TTTGGGC 6290 0.0 36.55803 4 TTGGGAC 4000 0.0 36.449997 5 CGACCAA 2235 0.0 36.44295 29 GGAACAT 2450 0.0 36.367344 8 TGGGCGA 4430 0.0 36.213318 6 ACACGAC 2275 0.0 36.098904 26 AGACACG 2265 0.0 36.059605 24 TTACGGG 720 0.0 35.9375 3 >>END_MODULE