##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933211.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1724444 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.15924843021867 33.0 31.0 34.0 30.0 34.0 2 32.33798024174749 34.0 31.0 34.0 30.0 34.0 3 32.42063064964707 34.0 31.0 34.0 30.0 34.0 4 35.91719475958628 37.0 35.0 37.0 35.0 37.0 5 35.11270995172937 37.0 35.0 37.0 35.0 37.0 6 34.7672287415538 37.0 35.0 37.0 32.0 37.0 7 35.60734590395513 37.0 35.0 37.0 33.0 37.0 8 35.87086968321383 37.0 35.0 37.0 35.0 37.0 9 37.74793788606647 39.0 38.0 39.0 35.0 39.0 10 37.21478575123344 39.0 37.0 39.0 34.0 39.0 11 37.17273915534514 39.0 37.0 39.0 34.0 39.0 12 37.0451223698769 39.0 37.0 39.0 33.0 39.0 13 36.99308762708444 39.0 37.0 39.0 33.0 39.0 14 38.140956157462924 40.0 37.0 41.0 33.0 41.0 15 38.21486983630666 40.0 37.0 41.0 33.0 41.0 16 38.21967950249472 40.0 37.0 41.0 34.0 41.0 17 38.16487633115369 40.0 37.0 41.0 33.0 41.0 18 38.11356414009385 40.0 37.0 41.0 33.0 41.0 19 38.123713498379765 40.0 37.0 41.0 34.0 41.0 20 38.02538035447947 40.0 37.0 41.0 33.0 41.0 21 37.93039495628736 40.0 37.0 41.0 33.0 41.0 22 37.96153078905433 40.0 37.0 41.0 33.0 41.0 23 37.86976381952676 40.0 36.0 41.0 33.0 41.0 24 37.807060710582654 40.0 36.0 41.0 33.0 41.0 25 37.69695507653481 40.0 36.0 41.0 33.0 41.0 26 37.67089856208726 40.0 36.0 41.0 33.0 41.0 27 37.601885013372424 40.0 36.0 41.0 33.0 41.0 28 37.51408685930074 39.0 36.0 41.0 33.0 41.0 29 37.405421689541676 39.0 36.0 41.0 32.0 41.0 30 37.3041838412845 39.0 35.0 41.0 32.0 41.0 31 37.239576350406274 39.0 35.0 41.0 32.0 41.0 32 37.17813219797222 39.0 35.0 41.0 32.0 41.0 33 37.08464641356866 39.0 35.0 41.0 31.0 41.0 34 36.9887181027624 39.0 35.0 41.0 31.0 41.0 35 36.81120349515554 39.0 35.0 41.0 31.0 41.0 36 36.706442192382006 39.0 35.0 41.0 31.0 41.0 37 36.62886762341949 39.0 35.0 41.0 30.0 41.0 38 36.51897307190028 39.0 35.0 41.0 30.0 41.0 39 36.47700708170286 39.0 35.0 41.0 30.0 41.0 40 36.422388897522914 39.0 35.0 40.0 30.0 41.0 41 36.33839544804006 39.0 35.0 40.0 30.0 41.0 42 36.262848779084734 39.0 35.0 40.0 30.0 41.0 43 36.126915689926726 38.0 35.0 40.0 30.0 41.0 44 36.04613892941725 38.0 35.0 40.0 30.0 41.0 45 36.040854327539776 38.0 35.0 40.0 29.0 41.0 46 35.80468487234146 38.0 35.0 40.0 28.0 41.0 47 35.711470479760436 38.0 34.0 40.0 28.0 41.0 48 35.61278301875851 38.0 34.0 40.0 28.0 41.0 49 35.67179450303982 38.0 34.0 40.0 28.0 41.0 50 35.47327602404021 38.0 34.0 40.0 28.0 41.0 51 34.39432999853866 36.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 13.0 9 16.0 10 40.0 11 39.0 12 33.0 13 38.0 14 36.0 15 56.0 16 82.0 17 182.0 18 374.0 19 625.0 20 1214.0 21 2003.0 22 3152.0 23 4648.0 24 6491.0 25 9420.0 26 12992.0 27 16368.0 28 19945.0 29 23987.0 30 29941.0 31 38573.0 32 49770.0 33 69157.0 34 110270.0 35 139008.0 36 156254.0 37 231456.0 38 365368.0 39 432730.0 40 163.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.50091507755543 4.654659704809203 53.35783591696802 16.486589300667344 2 20.195784844274446 5.853480890072394 52.29459466355533 21.656139602097834 3 21.302518376937726 5.9595440617381605 50.71802853557437 22.019909025749747 4 18.594225153150813 4.583912263894914 51.49671430327688 25.32514827967739 5 18.274179967572156 8.184435099081211 49.28510290853168 24.256282024814954 6 21.592408915569308 8.751110502863533 52.65210119899515 17.004379382572004 7 82.7711424667893 2.2042467021254386 10.562476949091998 4.462133881993269 8 84.6034431967637 3.5558707618223613 7.440833103307501 4.399852938106427 9 78.78759762566949 5.143222975057467 9.39926144310862 6.669917956164421 10 36.67988058759809 27.82966567774889 18.061357747772615 17.42909598688041 11 29.95835179338964 24.70071512905029 25.000753866173675 20.340179211386396 12 25.94453632591142 21.650224652119757 31.243229701863324 21.162009320105497 13 23.82153320142608 22.361062464191356 33.20519541371016 20.612208920672405 14 21.030720626474388 24.65890455126406 31.702102242809854 22.608272579451697 15 19.17331035394597 23.99782190665513 35.09078868319296 21.73807905620594 16 20.886384249068104 22.32847224960625 32.868333213487944 23.916810287837702 17 21.223652377229993 22.292634611503768 30.73257235375576 25.75114065751048 18 21.86026336604726 22.309219667324655 31.642778773912056 24.18773819271603 19 23.395366854475995 24.472815585777212 29.570806590414065 22.561010969332724 20 25.93259044654393 24.073266513728484 29.252733054828106 20.74140998489948 21 25.691179301850337 24.652815632168977 28.290219920159775 21.365785145820915 22 23.53506405542888 23.291449301919922 27.961070350791328 25.212416291859867 23 22.803581908139666 25.381340304469152 27.694027756192718 24.12105003119846 24 22.845856403571236 23.41369160146691 29.073370895198686 24.66708109976317 25 22.384084377341335 25.18788664636254 27.641373103446675 24.786655872849455 26 22.147138439984136 25.32265472233369 28.006360310917604 24.52384652676457 27 22.31119131731735 25.230335110911113 28.630271554193698 23.82820201757784 28 21.57008287888734 24.832293771209734 29.753532152972205 23.84409119693072 29 22.68592079534041 24.030992018296914 28.99862216459334 24.284465021769336 30 23.22348536687767 24.947693285487958 29.325278176618085 22.503543171016283 31 23.644142691789355 25.97144354934112 26.25536114828896 24.12905261058057 32 23.478350123286116 26.53411766343239 27.098415489282342 22.889116723999155 33 22.807873146359057 24.99112757503288 27.241186144635606 24.959813133972457 34 22.83222882273939 24.288118373226386 27.93236544648594 24.947287357548287 35 22.47738981376026 24.58114035596401 27.72476230019647 25.21670753007926 36 23.869316718896062 26.050715476988522 26.729542971531693 23.35042483258372 37 22.422415572787518 26.8485378475613 28.006824228562945 22.722222351088234 38 21.825295573529786 25.818582685201726 28.229504698325954 24.126617042942534 39 21.528736218746445 23.365502156057257 29.94623194490514 25.159529680291154 40 21.92526982610047 23.73860792232163 30.131972972157982 24.204149279419916 41 20.367898290695436 25.240715268225582 27.760367979476285 26.631018461602697 42 21.73587544739058 25.51854394807834 27.118421937737615 25.62715866679347 43 22.052035322689516 24.34280266567079 27.950806172888186 25.654355838751503 44 22.51925838125216 23.55275091565745 28.80418268149038 25.12380802160001 45 22.77545690089095 22.992628348615554 27.975857725736525 26.256057024756963 46 22.747041945113903 24.467596512267143 28.537777973654116 24.247583568964835 47 21.007466754501742 24.825972893291983 30.084421413510675 24.082138938695604 48 21.151861121613692 24.120934051787128 29.187668605069227 25.53953622152995 49 21.646629290368374 23.111971162879165 30.457295220952375 24.784104325800083 50 21.25148743595037 22.413659127231732 29.92152833029081 26.41332510652709 51 20.303007810053558 22.90900719304309 28.269459605530827 28.518525391372524 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 330.0 1 1124.0 2 1918.0 3 5362.5 4 8807.0 5 6097.5 6 3388.0 7 3317.5 8 3247.0 9 3363.5 10 3480.0 11 3660.0 12 3840.0 13 3830.0 14 3820.0 15 3815.0 16 3810.0 17 4056.0 18 4302.0 19 4297.0 20 4292.0 21 4838.5 22 5385.0 23 6128.5 24 6872.0 25 7976.0 26 11790.0 27 14500.0 28 16898.5 29 19297.0 30 21477.5 31 23658.0 32 27701.5 33 31745.0 34 37475.0 35 43205.0 36 46344.5 37 49484.0 38 54870.0 39 60256.0 40 67403.0 41 74550.0 42 81720.0 43 88890.0 44 100694.0 45 112498.0 46 137178.5 47 161859.0 48 169227.0 49 176595.0 50 170763.0 51 164931.0 52 146159.0 53 127387.0 54 114591.5 55 101796.0 56 93728.5 57 85661.0 58 83378.5 59 81096.0 60 74636.5 61 68177.0 62 61378.0 63 54579.0 64 47842.5 65 41106.0 66 34833.0 67 28560.0 68 23885.0 69 19210.0 70 16308.5 71 13407.0 72 10775.5 73 8144.0 74 6713.0 75 4085.0 76 2888.0 77 2177.5 78 1467.0 79 1149.0 80 831.0 81 650.5 82 470.0 83 348.0 84 226.0 85 144.5 86 63.0 87 47.5 88 32.0 89 22.0 90 12.0 91 8.5 92 5.0 93 3.5 94 2.0 95 3.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1724444.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.757304464350373 #Duplication Level Percentage of deduplicated Percentage of total 1 76.16583769030683 24.188216973133667 2 9.916734625148056 6.298575215659845 3 3.6035191611726525 3.4331416543344115 4 1.7286212068241928 2.195853998745947 5 1.0223078109619204 1.623287020450062 6 0.6553442708822557 1.2487180523625299 7 0.49760651109694715 1.1061849033444224 8 0.3795716635769722 0.96433383090031 9 0.32207604161410125 0.9205440222790613 >10 5.162016309288943 41.838842854406415 >50 0.4724940367649062 9.144911710235277 >100 0.06771479404483384 3.830079028183875 >500 0.0036211048926629063 0.7988808978951095 >1k 0.0025347734248640347 2.4084298380691274 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGC 4842 0.2807861548417925 No Hit GCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGC 4792 0.27788666955842 TruSeq Adapter, Index 19 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4761 0.276088988682729 No Hit GAATCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTC 4534 0.26292532549621794 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCG 4387 0.25440083876310277 No Hit CTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGCT 4047 0.23468433883616982 TruSeq Adapter, Index 13 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGC 3998 0.23184284325846477 TruSeq Adapter, Index 19 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGC 3559 0.20638536247045425 TruSeq Adapter, Index 19 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.3195882266979965E-4 0.0 0.0 0.253530993178091 0.0 2 2.3195882266979965E-4 0.0 0.0 1.0547167666795791 0.0 3 2.3195882266979965E-4 0.0 0.0 1.5362052928364156 0.0 4 2.3195882266979965E-4 0.0 0.0 2.151708028790729 0.0 5 2.3195882266979965E-4 0.0 0.0 3.3469918420082068 0.0 6 2.3195882266979965E-4 0.0 0.0 4.0879263113212145 0.0 7 2.3195882266979965E-4 0.0 0.0 4.792559224886398 0.0 8 2.3195882266979965E-4 0.0 0.0 5.876734762045042 0.0 9 2.3195882266979965E-4 0.0 0.0 6.446715579050407 0.0 10 2.3195882266979965E-4 0.0 0.0 7.727882146361378 0.0 11 2.3195882266979965E-4 0.0 0.0 9.295053942024213 0.0 12 2.3195882266979965E-4 0.0 0.0 10.996703865129863 0.0 13 2.899485283372496E-4 0.0 0.0 11.462709139873489 0.0 14 2.899485283372496E-4 0.0 0.0 11.637026195109843 0.0 15 2.899485283372496E-4 0.0 0.0 11.939964417516602 0.0 16 2.899485283372496E-4 0.0 0.0 12.54398519174876 0.0 17 2.899485283372496E-4 0.0 0.0 13.395332060652592 0.0 18 2.899485283372496E-4 0.0 0.0 14.304262707284202 0.0 19 2.899485283372496E-4 0.0 0.0 14.971608240105217 0.0 20 2.899485283372496E-4 0.0 0.0 15.607465362748805 0.0 21 2.899485283372496E-4 0.0 0.0 16.47876069040224 0.0 22 2.899485283372496E-4 0.0 0.0 17.42022356191329 0.0 23 2.899485283372496E-4 0.0 0.0 18.33205369382827 0.0 24 2.899485283372496E-4 0.0 0.0 19.038368308857812 0.0 25 3.4793823400469946E-4 0.0 0.0 19.684489609404537 0.0 26 3.4793823400469946E-4 0.0 0.0 20.229882791206904 0.0 27 4.059279396721494E-4 0.0 0.0 20.773072364193908 0.0 28 4.059279396721494E-4 0.0 0.0 21.349200090000025 0.0 29 4.059279396721494E-4 0.0 0.0 21.95490256569654 0.0 30 4.059279396721494E-4 0.0 0.0 22.637615370519427 0.0 31 4.639176453395993E-4 0.0 0.0 23.255089756466433 0.0 32 5.219073510070492E-4 0.0 0.0 23.864677542442667 0.0 33 5.219073510070492E-4 0.0 0.0 24.467306563738806 0.0 34 5.219073510070492E-4 0.0 0.0 25.077242287949044 0.0 35 5.219073510070492E-4 0.0 0.0 25.715129050290994 0.0 36 5.219073510070492E-4 0.0 0.0 26.33080575536231 0.0 37 5.219073510070492E-4 0.0 0.0 26.92131492817395 0.0 38 5.798970566744992E-4 0.0 0.0 27.512925905393274 0.0 39 5.798970566744992E-4 0.0 0.0 28.110567812002014 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCTCG 35 1.2123928E-7 45.0 1 CTCGATT 20 7.034271E-4 45.0 16 CTTTACG 30 2.1661363E-6 44.999996 1 ACACGCG 290 0.0 41.12069 36 ATGCGAA 150 0.0 40.5 26 TAATGCG 150 0.0 40.5 24 TTTGGGC 4845 0.0 39.380806 4 CGAGATA 335 0.0 38.955223 19 GCTACGA 185 0.0 38.91892 10 CGAATAT 175 0.0 38.57143 14 TTACGGG 375 0.0 38.4 3 TTGGGAC 3420 0.0 38.223686 5 TACGAAA 255 0.0 37.941174 20 GGACGTA 30 1.1401591E-4 37.499996 8 TTTGGGA 9240 0.0 37.183437 4 TATGGGA 970 0.0 36.881443 4 TTGGGAT 4250 0.0 36.158825 5 CGTTTTT 3045 0.0 36.133003 1 CGTTTGG 1130 0.0 36.039825 2 GTCGACG 25 0.0021074 36.000004 37 >>END_MODULE