##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933209.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2195268 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.992030130262 33.0 31.0 34.0 30.0 34.0 2 32.19817534806684 34.0 31.0 34.0 30.0 34.0 3 32.18252167844655 33.0 31.0 34.0 30.0 34.0 4 35.84966482452256 37.0 35.0 37.0 35.0 37.0 5 35.0446200646117 37.0 35.0 37.0 33.0 37.0 6 34.680481836386264 37.0 35.0 37.0 32.0 37.0 7 35.55995987733616 37.0 35.0 37.0 33.0 37.0 8 35.72779861046578 37.0 35.0 37.0 35.0 37.0 9 37.66326343753929 39.0 37.0 39.0 35.0 39.0 10 37.1625081766782 39.0 37.0 39.0 34.0 39.0 11 37.107083964235805 39.0 37.0 39.0 33.0 39.0 12 37.091065874417154 39.0 37.0 39.0 33.0 39.0 13 37.074990843942516 39.0 37.0 39.0 33.0 39.0 14 38.259494968268115 40.0 38.0 41.0 33.0 41.0 15 38.28057029938942 40.0 38.0 41.0 33.0 41.0 16 38.31065546438977 40.0 38.0 41.0 33.0 41.0 17 38.183846345867565 40.0 37.0 41.0 33.0 41.0 18 37.98035501815723 39.0 37.0 41.0 33.0 41.0 19 37.796790642418145 39.0 37.0 41.0 33.0 41.0 20 37.44234781356992 39.0 35.0 41.0 33.0 41.0 21 37.38923356965983 39.0 35.0 41.0 33.0 41.0 22 37.45888474664597 39.0 35.0 41.0 33.0 41.0 23 37.338554563725246 39.0 35.0 41.0 33.0 41.0 24 37.24798748945459 39.0 35.0 41.0 33.0 41.0 25 37.17083062295811 39.0 35.0 41.0 33.0 41.0 26 37.1327427904019 39.0 35.0 41.0 32.0 41.0 27 37.01375230723538 39.0 35.0 41.0 32.0 41.0 28 36.88355544744423 39.0 35.0 41.0 32.0 41.0 29 36.78401498131436 39.0 35.0 40.0 31.0 41.0 30 36.58959498339155 39.0 35.0 40.0 31.0 41.0 31 36.37994859853102 39.0 35.0 40.0 30.0 41.0 32 35.94032254831756 38.0 35.0 40.0 29.0 41.0 33 35.392977987197916 38.0 35.0 40.0 24.0 41.0 34 34.92482239070583 38.0 35.0 40.0 21.0 41.0 35 34.587547852927294 38.0 34.0 40.0 18.0 41.0 36 34.42684446728144 38.0 34.0 40.0 18.0 41.0 37 34.359830781480895 38.0 34.0 40.0 16.0 41.0 38 34.27873453264021 38.0 34.0 40.0 16.0 41.0 39 34.20136539137818 38.0 34.0 40.0 15.0 41.0 40 34.09784454563179 38.0 33.0 40.0 15.0 41.0 41 33.97438262663147 38.0 33.0 40.0 15.0 41.0 42 33.925620470940224 38.0 33.0 40.0 15.0 41.0 43 33.823047573234795 38.0 33.0 40.0 15.0 41.0 44 33.76672870920544 38.0 33.0 40.0 14.0 41.0 45 33.821639544693404 38.0 33.0 40.0 15.0 41.0 46 33.59372841949138 38.0 33.0 40.0 13.0 41.0 47 33.4766215332251 38.0 33.0 40.0 13.0 41.0 48 33.39066300788787 38.0 33.0 40.0 12.0 41.0 49 33.48705533902922 38.0 33.0 40.0 12.0 41.0 50 33.3042070489799 38.0 33.0 40.0 12.0 41.0 51 32.386727269745656 36.0 31.0 40.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 20.0 10 20.0 11 24.0 12 26.0 13 21.0 14 36.0 15 66.0 16 132.0 17 319.0 18 836.0 19 1707.0 20 3414.0 21 5926.0 22 9720.0 23 15501.0 24 26127.0 25 45055.0 26 62278.0 27 59112.0 28 48774.0 29 43380.0 30 44931.0 31 52356.0 32 64417.0 33 83692.0 34 119810.0 35 149977.0 36 178436.0 37 257816.0 38 419415.0 39 501752.0 40 168.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.768061120555668 3.8152517141415077 46.80471814830809 23.611969016994735 2 28.315130544425553 9.8083240861708 42.706084177421616 19.170461191982028 3 15.831779992237848 9.855334291758455 54.58959908311878 19.723286632884914 4 14.006626981307067 3.7282463917845106 60.68680452682771 21.57832210008072 5 17.66645348085063 6.7577626057501865 54.72876204636519 20.847021867034 6 16.699874457241666 10.278198379423378 57.97661151166965 15.045315651665309 7 69.67636753234684 1.4114905332742973 24.567296566979522 4.3448453673993335 8 70.98531933230932 5.315296355615806 19.221070047028427 4.478314265046454 9 65.92666590138425 3.795026393132866 20.449211668005912 9.829096037476972 10 32.3641122632863 18.486262269572553 31.640738169553785 17.508887297587357 11 24.64883558636121 22.10345160590871 33.859510547231594 19.388202260498492 12 18.037979873072445 19.63213603077164 40.661641312131366 21.668242784024546 13 19.262887264789537 20.46816151832031 43.791919710941904 16.477031505948247 14 18.22383417423294 24.298809985842276 39.83759613860357 17.639759701321207 15 15.895280211801019 22.751254061007586 43.46494368796885 17.888522039222547 16 16.36765989391728 22.831289847071066 39.14656433747497 21.654485921536686 17 17.165193498014823 23.905600591818402 38.96430868577322 19.96489722439356 18 18.10562537239189 22.420861598674968 38.501267271239776 20.97224575769337 19 18.407957479451255 25.330802435055766 35.69172419950548 20.569515885987496 20 19.681833835322156 24.480382349672112 37.784634951176805 18.053148863828927 21 19.346066175063818 26.369764420562774 36.6531102352879 17.631059169085507 22 18.30396106534601 21.847901941813028 37.53277504158945 22.31536195125151 23 18.121386545970697 24.670700798262445 36.65634446454829 20.551568191218568 24 18.61604141271134 23.373865969895245 36.49285645306177 21.517236164331642 25 17.82001104193201 27.432368166437993 34.415296902246105 20.332323889383893 26 17.593250573506285 23.68785952330194 36.595850711621544 22.123039191570232 27 20.02789636618399 23.927602461294022 34.85865962606843 21.185841546453553 28 17.438371989205873 23.48082329811212 37.05597676456816 22.024827948113852 29 18.582514754462782 22.536565011652335 34.86225827552718 24.018661958357704 30 17.82529513480814 26.148424702587565 35.29669270448984 20.729587458114455 31 17.843242829577072 24.467217670006576 34.6422851332958 23.04725436712055 32 17.951247865864215 27.352833458147252 32.95214980585514 21.743768870133394 33 17.511893764223778 26.83403575326566 31.12681458482518 24.527255897685386 34 17.276068343364 25.624752877552993 30.787994905405625 26.311183873677386 35 16.734448823560495 26.907284213134798 28.98429713365293 27.373969829651777 36 17.264133581867906 26.427479469477078 29.071712428733075 27.236674519921937 37 16.56740771514002 28.397535061778335 30.76544640563248 24.26961081744917 38 17.485245537219146 27.139738747159804 30.40257499312157 24.972440722499485 39 19.248811534628118 26.59310844962893 29.03955234622834 25.118527669514613 40 18.972717681850234 25.570636478097438 30.128029926186688 25.328615913865644 41 17.62522844591184 25.015396753380454 29.371356936829578 27.988017863878124 42 18.779165003999513 24.64327817833631 31.345147836163967 25.23240898150021 43 19.711989606735944 24.30746496555318 30.48169972868916 25.498845699021714 44 19.890373293830184 24.805035193880656 30.61065892638165 24.693932585907508 45 19.51984905715384 23.94295366214968 29.540174593717033 26.99702268697945 46 21.75629581445181 25.436985370351138 28.72373669182988 24.08298212336717 47 17.887109910953924 24.668605382121907 33.19330487211584 24.250979834808323 48 18.744681742730272 24.98934070919815 30.273889110577844 25.992088437493738 49 18.884619098898174 23.107155937224977 33.126615975817074 24.88160898805977 50 19.242251971057748 22.58343855966561 31.98989827210163 26.184411197175017 51 18.07770167469302 22.530233210705937 30.504430438561485 28.887634676039553 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 259.0 1 818.0 2 1377.0 3 26000.0 4 50623.0 5 35201.0 6 19779.0 7 19905.5 8 20032.0 9 20534.0 10 21036.0 11 21543.0 12 22050.0 13 21980.0 14 21910.0 15 21542.5 16 21175.0 17 20613.0 18 20051.0 19 19446.0 20 18841.0 21 18544.0 22 18247.0 23 18382.5 24 18518.0 25 18669.0 26 20606.5 27 22393.0 28 24557.5 29 26722.0 30 30061.0 31 33400.0 32 37943.0 33 42486.0 34 49138.5 35 55791.0 36 61486.5 37 67182.0 38 74847.5 39 82513.0 40 90439.0 41 98365.0 42 110039.0 43 121713.0 44 139027.5 45 156342.0 46 224887.0 47 293432.0 48 260656.0 49 227880.0 50 210669.0 51 193458.0 52 166200.0 53 138942.0 54 119577.5 55 100213.0 56 88085.0 57 75957.0 58 67176.0 59 58395.0 60 50097.5 61 41800.0 62 35832.0 63 29864.0 64 25205.5 65 20547.0 66 16891.5 67 13236.0 68 10931.5 69 8627.0 70 6824.0 71 5021.0 72 3977.5 73 2934.0 74 2624.0 75 1875.0 76 1436.0 77 1171.0 78 906.0 79 637.5 80 369.0 81 276.5 82 184.0 83 131.0 84 78.0 85 54.0 86 30.0 87 21.0 88 12.0 89 7.5 90 3.0 91 3.0 92 3.0 93 2.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2195268.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.34345456727469 #Duplication Level Percentage of deduplicated Percentage of total 1 77.9199801245597 31.435611780381212 2 8.471201389304097 6.835150567592481 3 3.0848088379456438 3.733555356071625 4 1.8401979317856156 2.969597666231433 5 1.2396296004294356 2.50054702325869 6 0.9646495182834931 2.335037640852811 7 0.7972409942580139 2.251441908171196 8 0.6721738092615439 2.1694250828204047 9 0.5938250156069255 2.156125728424426 >10 4.284616224776094 29.101978739767826 >50 0.0850415248367159 2.34993087906794 >100 0.04023556048165077 3.016473002184495 >500 0.0031997342354706864 0.8715306580073761 >1k 0.0022855244539076325 2.518282857190907 >5k 4.5710489078152646E-4 1.1575074180380445 >10k+ 4.5710489078152646E-4 4.597803691939145 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 30740 1.4002846121749144 No Hit GAATCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCTTC 29486 1.3431617460829384 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGC 19868 0.9050375626119452 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCG 19635 0.8944238243348877 No Hit GAACTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCTTCT 8001 0.3644657508787082 No Hit GCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCTTCTGC 6640 0.3024687646337486 TruSeq Adapter, Index 13 (95% over 23bp) GAATGATCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTC 5344 0.24343269250041455 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCTT 5122 0.2333200319960934 No Hit GAATGACTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCT 4856 0.22120306040082577 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCT 4625 0.21068042717335653 No Hit CGTTCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCTTC 4244 0.19332491522675135 No Hit CTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCTTCTGCT 4159 0.18945295061924103 TruSeq Adapter, Index 16 (95% over 22bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCATAACCCT 3789 0.1725985164453725 No Hit CCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCTTCTGC 3513 0.16002601960216248 TruSeq Adapter, Index 13 (95% over 23bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCATAACCCTCGTA 3105 0.14144058948611288 No Hit TCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCTTCTGC 2959 0.13478992086615393 TruSeq Adapter, Index 13 (95% over 23bp) GAATGCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCTT 2934 0.13365110774629796 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCC 2874 0.13091795625864358 No Hit CGTCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCTTCT 2708 0.12335623714279988 No Hit CGCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCTTCTG 2678 0.12198966139897269 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGT 2278 0.10376865148127701 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.82210099176957E-4 0.0 0.0 0.20507746662366508 0.0 2 1.82210099176957E-4 0.0 0.0 0.8720575346609161 0.0 3 1.82210099176957E-4 0.0 0.0 1.319656643289111 0.0 4 1.82210099176957E-4 0.0 0.0 2.293569623389946 0.0 5 1.82210099176957E-4 0.0 0.0 4.808570069804689 0.0 6 1.82210099176957E-4 0.0 0.0 6.5314576625724055 0.0 7 1.82210099176957E-4 0.0 0.0 8.012598006257095 0.0 8 1.82210099176957E-4 0.0 0.0 9.699180236763803 0.0 9 2.2776262397119622E-4 0.0 0.0 10.675234185529968 0.0 10 2.2776262397119622E-4 0.0 0.0 12.79124006727197 0.0 11 2.2776262397119622E-4 0.0 0.0 14.231428691166636 0.0 12 2.2776262397119622E-4 0.0 0.0 16.468285421187755 0.0 13 2.2776262397119622E-4 0.0 0.0 17.04074400027696 0.0 14 2.7331514876543546E-4 0.0 0.0 17.313649176319245 0.0 15 2.7331514876543546E-4 0.0 0.0 17.69738364518592 0.0 16 2.7331514876543546E-4 0.0 0.0 18.183474637265245 0.0 17 2.7331514876543546E-4 0.0 0.0 18.79888924723542 0.0 18 2.7331514876543546E-4 0.0 0.0 19.483589247417626 0.0 19 2.7331514876543546E-4 0.0 0.0 20.208147706794797 0.0 20 2.7331514876543546E-4 0.0 0.0 20.71236860374223 0.0 21 2.7331514876543546E-4 0.0 0.0 21.33183738841909 0.0 22 2.7331514876543546E-4 0.0 0.0 22.01471528760953 0.0 23 2.7331514876543546E-4 0.0 0.0 22.678096706188036 0.0 24 2.7331514876543546E-4 0.0 0.0 23.2184407552973 0.0 25 2.7331514876543546E-4 0.0 0.0 23.678931228442266 0.0 26 2.7331514876543546E-4 0.0 0.0 24.104983992842786 0.0 27 2.7331514876543546E-4 0.0 0.0 24.54989550250812 0.0 28 2.7331514876543546E-4 0.0 0.0 25.00214096866533 0.0 29 2.7331514876543546E-4 0.0 0.0 25.496568072782 0.0 30 2.7331514876543546E-4 0.0 0.0 26.038916432982216 0.0 31 3.188676735596747E-4 0.0 0.0 26.53070149066082 0.0 32 3.188676735596747E-4 0.0 0.0 27.01661027264097 0.0 33 3.188676735596747E-4 0.0 0.0 27.482111523513304 0.0 34 3.188676735596747E-4 0.0 0.0 27.966790387324007 0.0 35 3.188676735596747E-4 0.0 0.0 28.45433906019675 0.0 36 3.188676735596747E-4 0.0 0.0 28.933004990734617 0.0 37 3.188676735596747E-4 0.0 0.0 29.417638302020528 0.0 38 3.188676735596747E-4 0.0 0.0 29.90518697489327 0.0 39 3.188676735596747E-4 0.0 0.0 30.448400833064575 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGA 30 2.166409E-6 44.999996 22 CGTTTTT 26345 0.0 44.17157 1 CGTTATT 590 0.0 43.474575 1 CGATGAA 1400 0.0 42.589287 19 CGTATGG 150 0.0 42.0 2 CCGATGA 1385 0.0 41.750904 18 TACGGGT 105 0.0 40.714287 4 TAATACG 140 0.0 40.17857 4 GTTTTTT 29640 0.0 39.375 2 GCGAGAC 280 0.0 38.571426 21 CGTTTTC 705 0.0 37.659573 1 TTACGGG 485 0.0 37.577316 3 GATGAAT 1645 0.0 37.477203 20 CTTACGG 115 0.0 37.173912 2 TCTTGCG 455 0.0 36.593407 1 CGAGACA 310 0.0 36.29032 22 ATAGCGT 25 0.0021075252 36.0 12 ACTCGAC 25 0.0021075252 36.0 35 CGTTCTG 655 0.0 35.72519 1 TCGTTTG 700 0.0 35.67857 1 >>END_MODULE