##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933207.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 174491 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.09291023605802 33.0 31.0 34.0 30.0 34.0 2 32.28196296657134 34.0 31.0 34.0 30.0 34.0 3 32.358883839281106 34.0 31.0 34.0 30.0 34.0 4 35.86988440664562 37.0 35.0 37.0 35.0 37.0 5 35.11592001879753 37.0 35.0 37.0 35.0 37.0 6 34.82141772355021 37.0 35.0 37.0 32.0 37.0 7 35.56485434778871 37.0 35.0 37.0 33.0 37.0 8 35.811680831676135 37.0 35.0 37.0 35.0 37.0 9 37.62339031812529 39.0 37.0 39.0 35.0 39.0 10 37.20371251239319 39.0 37.0 39.0 34.0 39.0 11 37.155881965258956 39.0 37.0 39.0 34.0 39.0 12 37.091368609269246 39.0 37.0 39.0 33.0 39.0 13 37.05071894825521 39.0 37.0 39.0 33.0 39.0 14 38.1689485417586 40.0 37.0 41.0 33.0 41.0 15 38.22561622089391 40.0 37.0 41.0 33.0 41.0 16 38.19804459828874 40.0 37.0 41.0 33.0 41.0 17 38.150907496661716 40.0 37.0 41.0 33.0 41.0 18 38.1254219415328 40.0 37.0 41.0 33.0 41.0 19 38.140987214240276 40.0 37.0 41.0 34.0 41.0 20 38.067464797611336 40.0 37.0 41.0 34.0 41.0 21 37.96194646142208 40.0 37.0 41.0 33.0 41.0 22 37.98951235307265 40.0 37.0 41.0 33.0 41.0 23 37.88149532067556 40.0 37.0 41.0 33.0 41.0 24 37.820208492128536 40.0 36.0 41.0 33.0 41.0 25 37.69996733355875 40.0 36.0 41.0 33.0 41.0 26 37.58082651827315 40.0 36.0 41.0 33.0 41.0 27 37.53530554584477 39.0 36.0 41.0 33.0 41.0 28 37.469302141657735 39.0 36.0 41.0 32.0 41.0 29 37.367795473692055 39.0 36.0 41.0 32.0 41.0 30 37.23751368265412 39.0 36.0 41.0 32.0 41.0 31 37.207397516204274 39.0 36.0 41.0 32.0 41.0 32 37.19523069957763 39.0 35.0 41.0 32.0 41.0 33 37.09582729195202 39.0 35.0 41.0 31.0 41.0 34 37.016069596712725 39.0 35.0 41.0 31.0 41.0 35 36.90945664819389 39.0 35.0 41.0 31.0 41.0 36 36.773186009593616 39.0 35.0 41.0 31.0 41.0 37 36.78997197563198 39.0 35.0 41.0 31.0 41.0 38 36.71527471330899 39.0 35.0 41.0 31.0 41.0 39 36.62016379068261 39.0 35.0 41.0 30.0 41.0 40 36.52062284014648 39.0 35.0 40.0 30.0 41.0 41 36.44519201563404 39.0 35.0 40.0 30.0 41.0 42 36.38048953814237 39.0 35.0 40.0 30.0 41.0 43 36.235376036586416 39.0 35.0 40.0 30.0 41.0 44 36.16473055916924 38.0 35.0 40.0 30.0 41.0 45 36.11825251732181 38.0 35.0 40.0 30.0 41.0 46 35.813480351422136 38.0 35.0 40.0 28.0 41.0 47 35.73556802356568 38.0 35.0 40.0 28.0 41.0 48 35.682860434062505 38.0 34.0 40.0 28.0 41.0 49 35.76254362689193 38.0 35.0 40.0 28.0 41.0 50 35.576940931050885 38.0 34.0 40.0 28.0 41.0 51 34.42265217117215 37.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 5.0 11 7.0 12 6.0 13 5.0 14 4.0 15 0.0 16 12.0 17 15.0 18 59.0 19 78.0 20 159.0 21 275.0 22 391.0 23 548.0 24 655.0 25 883.0 26 1226.0 27 1588.0 28 1786.0 29 2318.0 30 3026.0 31 3799.0 32 5042.0 33 6945.0 34 10738.0 35 13660.0 36 15781.0 37 23758.0 38 38228.0 39 43472.0 40 15.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.436217340722443 4.442636009880166 54.46527328057035 16.655873368827045 2 20.734593761282817 4.500518651391762 51.95110349530921 22.813784092016206 3 21.456694041526497 4.551524147377228 50.98830312165097 23.003478689445302 4 19.25371509132276 4.856984027829515 49.58937710254397 26.299923778303754 5 16.74642245158776 7.676040598082423 50.18310399963322 25.3944329506966 6 21.221724902717046 7.377457863156265 53.051446779490064 18.34937045463663 7 79.8052621625184 2.0178691164587286 12.096898980463177 6.079969740559685 8 80.78238992268942 2.7199110555845287 9.398765552378059 7.09893346934799 9 73.41811325512491 6.448470121668167 12.754812569129639 7.378604054077289 10 33.315758405877666 29.07829057086039 19.984411803474107 17.62153921978784 11 25.56464230246832 26.217971127450703 27.813468889512926 20.40391768056805 12 23.319827383647294 21.367291149686803 34.894636399585075 20.41824506708082 13 23.39604907989524 23.146179459112503 33.56218945389733 19.895582007094923 14 20.12940495498335 25.405321764446303 32.89797181516525 21.56730146540509 15 18.094342974709296 25.326234590895808 34.50665077281923 22.07277166157567 16 19.30013582362414 24.660870761242702 30.92709652646841 25.11189688866475 17 19.470918270856377 24.193797960926354 30.10355834971431 26.23172541850296 18 21.04349221449817 23.13185207259973 31.658366334080267 24.16628937882183 19 22.092256907233036 25.49587084720702 29.34592615091896 23.065946094640985 20 23.97315620862967 25.768091190949676 29.610123158214464 20.648629442206186 21 24.201248201912993 26.35150236974973 28.747041394685112 20.700208033652164 22 21.536927405998014 25.305603154317414 28.241571198514535 24.91589824117003 23 21.461851900671096 25.65920305345261 27.689107174582073 25.189837871294223 24 22.39943607406686 24.754285321305968 27.96132751832473 24.884951086302447 25 20.85035904430601 26.24376042317369 26.62830747717647 26.27757305534383 26 19.777524342229686 28.308050271933794 27.28908654314549 24.62533884269103 27 20.11507756847058 27.5269211592575 27.71661575668659 24.64138551558533 28 19.206721263560873 27.49769329077144 27.66790264254317 25.627682803124518 29 21.459559518829053 27.352127043801687 26.640915577307712 24.54739786006155 30 21.923193746382335 26.802528497171775 27.771632920895634 23.502644835550257 31 22.549013989260192 27.52290949103392 26.011656761666792 23.916419758039094 32 23.723286587846935 26.8724461433541 25.426526296485207 23.977740972313757 33 22.52952874360282 25.558911347863212 27.056409786178083 24.85515012235588 34 21.0927784241021 24.636800751901244 29.316698282432906 24.953722541563746 35 21.675616507441646 26.193328022648732 26.512542194153284 25.618513275756342 36 21.8527030047395 27.62320119662332 27.149824346241353 23.374271452395824 37 21.68650532119135 26.934340453089273 27.769913634514097 23.60924059120528 38 23.299195947068903 25.832850977987405 26.952106412365108 23.915846662578584 39 23.613825354889364 23.400060748118815 29.576883621504834 23.40923027548699 40 23.421265280157716 23.63846845969133 30.513321603979577 22.42694465617138 41 20.753505911479674 25.82941240522434 27.690253365503093 25.726828317792894 42 22.608615917153323 25.850043841802727 25.418502960038055 26.122837281005896 43 22.390266546698683 24.534216664469803 26.264964955212587 26.810551833618927 44 21.677908889283685 23.739906356201754 27.24782366998871 27.33436108452585 45 23.487744353576975 22.934134138723486 27.380208721366717 26.19791278633282 46 22.585119003272375 24.107260546389213 30.45486586700747 22.852754583330945 47 20.29388335214997 24.645397183808907 30.738548119960342 24.322171344080783 48 20.170667828140132 23.41152265732903 30.36718226154931 26.050627252981528 49 21.91860898269825 21.715733189677405 31.723699216578506 24.64195861104584 50 22.011450447301005 21.34264804488484 29.180301562831325 27.465599944982838 51 19.962634175974692 21.369010436068336 28.635287779885495 30.03306760807148 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 25.0 1 69.5 2 114.0 3 442.5 4 771.0 5 500.0 6 229.0 7 280.5 8 332.0 9 376.0 10 420.0 11 439.0 12 458.0 13 471.0 14 484.0 15 507.0 16 530.0 17 548.5 18 567.0 19 577.5 20 588.0 21 631.0 22 674.0 23 759.5 24 845.0 25 956.5 26 1261.5 27 1455.0 28 1646.0 29 1837.0 30 2119.5 31 2402.0 32 2656.5 33 2911.0 34 3445.0 35 3979.0 36 4266.0 37 4553.0 38 5002.5 39 5452.0 40 6179.0 41 6906.0 42 8168.5 43 9431.0 44 11266.0 45 13101.0 46 15325.5 47 17550.0 48 19668.5 49 21787.0 50 20643.5 51 19500.0 52 15932.0 53 12364.0 54 11022.0 55 9680.0 56 9012.0 57 8344.0 58 7674.0 59 7004.0 60 6371.5 61 5739.0 62 5066.5 63 4394.0 64 3802.5 65 3211.0 66 2610.0 67 2009.0 68 1672.5 69 1336.0 70 1132.5 71 929.0 72 761.0 73 593.0 74 521.0 75 338.0 76 227.0 77 168.0 78 109.0 79 84.0 80 59.0 81 53.5 82 48.0 83 33.0 84 18.0 85 12.0 86 6.0 87 3.0 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 174491.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.51324242406767 #Duplication Level Percentage of deduplicated Percentage of total 1 73.81599999999975 42.45397502774965 2 12.35499999999996 14.211522202987073 3 6.280999999999979 10.837220269967036 4 3.3659999999999886 7.743582959976446 5 1.6899999999999942 4.859868984833702 6 0.895000000000331 3.0884611181735764 7 0.4489999999999999 1.8076412093884466 8 0.28999999999999904 1.3343072242383653 9 0.17599999999999943 0.9110097599972288 >10 0.620999999999998 6.2442127299810055 >50 0.03599999999999988 1.41482576363206 >100 0.019999999999999934 2.2648714866597772 >500 0.0019999999999999935 0.8465949284822734 >1k 0.00299999999999999 1.9819063339333653 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTGTCTCTTATACACATCTGACGCAACGTTGCTCGTATGCCGTCTTCTGC 1276 0.7312698076118539 TruSeq Adapter, Index 27 (95% over 22bp) CTGTCTCTTATACACATCTGACGCAACGTTGCTCGTATGCCGTCTTCTGCT 1159 0.6642176387320836 Illumina Single End Adapter 1 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCAACGTTGCTCGTATGCCGTCTTCTGC 1011 0.5793995105764768 TruSeq Adapter, Index 27 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCAACGTTGCTCGTATGCCGTCTTCTGC 786 0.4504530319615338 TruSeq Adapter, Index 27 (95% over 22bp) CGGCTGTCTCTTATACACATCTGACGCAACGTTGCTCGTATGCCGTCTTCT 686 0.3931434859104481 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 431 0.2470041434801795 No Hit TCCTGTCTCTTATACACATCTGACGCAACGTTGCTCGTATGCCGTCTTCTG 426 0.2441386661776252 No Hit TTCCTGTCTCTTATACACATCTGACGCAACGTTGCTCGTATGCCGTCTTCT 324 0.18568292920551777 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAACGTTGCTCGTATGCC 267 0.1530164879563989 No Hit GCCTGTCTCTTATACACATCTGACGCAACGTTGCTCGTATGCCGTCTTCTG 241 0.1381160059831166 TruSeq Adapter, Index 27 (95% over 21bp) TTCTGTCTCTTATACACATCTGACGCAACGTTGCTCGTATGCCGTCTTCTG 239 0.1369698150620949 No Hit CGGTCTGTCTCTTATACACATCTGACGCAACGTTGCTCGTATGCCGTCTTC 211 0.12092314216779088 No Hit TGCTGTCTCTTATACACATCTGACGCAACGTTGCTCGTATGCCGTCTTCTG 190 0.10888813749706289 No Hit TTTCCTGTCTCTTATACACATCTGACGCAACGTTGCTCGTATGCCGTCTTC 188 0.10774194657604116 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.7209540893226585 0.0 2 0.0 0.0 0.0 2.6683324641385515 0.0 3 0.0 0.0 0.0 3.798476712265962 0.0 4 0.0 0.0 0.0 5.565330017020935 0.0 5 0.0 0.0 0.0 7.638789393149217 0.0 6 0.0 0.0 0.0 9.014218498375275 0.0 7 0.0 0.0 0.0 10.190783478804065 0.0 8 0.0 0.0 0.0 11.853906505206572 0.0 9 0.0 0.0 0.0 13.006401476293906 0.0 10 0.0 0.0 0.0 14.645454493354958 0.0 11 0.0 0.0 0.0 17.13841974657719 0.0 12 0.0 0.0 0.0 19.16545839040409 0.0 13 0.0 0.0 0.0 19.929394639265062 0.0 14 0.0 0.0 0.0 20.197603314784143 0.0 15 0.0 0.0 0.0 20.579284891484374 0.0 16 0.0 0.0 0.0 21.488787387315107 0.0 17 0.0 0.0 0.0 22.94215747517064 0.0 18 0.0 0.0 0.0 24.530204996246226 0.0 19 0.0 0.0 0.0 25.431111060169293 0.0 20 0.0 0.0 0.0 26.29304663277762 0.0 21 0.0 0.0 0.0 27.139508627952157 0.0 22 0.0 0.0 0.0 27.960181327403706 0.0 23 0.0 0.0 0.0 28.69145113501556 0.0 24 0.0 0.0 0.0 29.250792304474157 0.0 25 0.0 0.0 0.0 29.732192491303277 0.0 26 0.0 0.0 0.0 30.208434818987797 0.0 27 0.0 0.0 0.0 30.67608071476466 0.0 28 0.0 0.0 0.0 31.123095173963126 0.0 29 0.0 0.0 0.0 31.561513201253934 0.0 30 0.0 0.0 0.0 32.112257938804866 0.0 31 0.0 0.0 0.0 32.585634789186834 0.0 32 0.0 0.0 0.0 33.03608782114837 0.0 33 0.0 0.0 0.0 33.436108452584946 0.0 34 0.0 0.0 0.0 33.84701789777123 0.0 35 0.0 0.0 0.0 34.26480448848365 0.0 36 0.0 0.0 0.0 34.66482511992022 0.0 37 0.0 0.0 0.0 35.065418846817316 0.0 38 0.0 0.0 0.0 35.49008258305586 0.0 39 0.0 0.0 0.0 35.91875798751798 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAC 20 7.0168247E-4 45.000004 6 ACACGAC 45 3.8016879E-10 45.000004 26 CACGGGA 20 7.0168247E-4 45.000004 4 TTAGCGG 20 7.0168247E-4 45.000004 2 GACACGA 45 3.8016879E-10 45.000004 25 TAGCGGG 20 7.0168247E-4 45.000004 3 AGTGACG 20 7.0168247E-4 45.000004 11 GCATAGA 20 7.0168247E-4 45.000004 40 TCTTATG 35 1.2040255E-7 45.0 1 TATTCAC 25 3.8771686E-5 45.0 22 ATGCGAA 25 3.8771686E-5 45.0 26 TAATGCG 25 3.8771686E-5 45.0 24 TACGGGA 30 2.1548913E-6 44.999996 4 AATGCGA 30 2.1548913E-6 44.999996 25 CCCCGAT 30 2.1548913E-6 44.999996 40 GCGATTC 30 2.1548913E-6 44.999996 9 CCCGATC 30 2.1548913E-6 44.999996 41 TTGTAGG 65 0.0 41.538464 2 ATGGGAC 60 3.6379788E-12 41.249996 5 CGACCAA 50 1.0695658E-9 40.5 29 >>END_MODULE