##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933206.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1851350 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.356952494125906 33.0 31.0 34.0 31.0 34.0 2 32.54424068922678 34.0 31.0 34.0 31.0 34.0 3 32.61101898614525 34.0 31.0 34.0 31.0 34.0 4 36.052262943257624 37.0 35.0 37.0 35.0 37.0 5 35.24996570070489 37.0 35.0 37.0 35.0 37.0 6 34.93362357198801 37.0 35.0 37.0 32.0 37.0 7 35.72628946444487 37.0 35.0 37.0 35.0 37.0 8 36.01632970535015 37.0 35.0 37.0 35.0 37.0 9 37.89947119669431 39.0 38.0 39.0 35.0 39.0 10 37.42927269289977 39.0 37.0 39.0 35.0 39.0 11 37.35760120992789 39.0 37.0 39.0 34.0 39.0 12 37.231720096146056 39.0 37.0 39.0 34.0 39.0 13 37.22273206038837 39.0 37.0 39.0 34.0 39.0 14 38.45275069543846 40.0 38.0 41.0 34.0 41.0 15 38.52564344937478 40.0 38.0 41.0 34.0 41.0 16 38.50595511383585 40.0 38.0 41.0 34.0 41.0 17 38.455794960434275 40.0 38.0 41.0 34.0 41.0 18 38.39446025873011 40.0 38.0 41.0 34.0 41.0 19 38.38924676587355 40.0 37.0 41.0 34.0 41.0 20 38.31929294838901 40.0 37.0 41.0 34.0 41.0 21 38.22076322683447 40.0 37.0 41.0 34.0 41.0 22 38.23597861020337 40.0 37.0 41.0 34.0 41.0 23 38.162550031058416 40.0 37.0 41.0 34.0 41.0 24 38.11287600939855 40.0 37.0 41.0 34.0 41.0 25 38.009425014178845 40.0 37.0 41.0 34.0 41.0 26 37.970208226429364 40.0 37.0 41.0 34.0 41.0 27 37.93098711750884 40.0 37.0 41.0 33.0 41.0 28 37.841053825586734 40.0 36.0 41.0 33.0 41.0 29 37.770381073270855 40.0 36.0 41.0 33.0 41.0 30 37.68389337510465 40.0 36.0 41.0 33.0 41.0 31 37.625281551300404 40.0 36.0 41.0 33.0 41.0 32 37.57369217057823 40.0 36.0 41.0 33.0 41.0 33 37.47650039160612 40.0 36.0 41.0 33.0 41.0 34 37.35204688470576 40.0 36.0 41.0 33.0 41.0 35 37.218112188403055 40.0 35.0 41.0 32.0 41.0 36 37.09503119345342 39.0 35.0 41.0 32.0 41.0 37 37.07487617144246 39.0 35.0 41.0 32.0 41.0 38 36.96766683771302 39.0 35.0 41.0 31.0 41.0 39 36.92177870202825 39.0 35.0 41.0 31.0 41.0 40 36.820184189915466 39.0 35.0 41.0 31.0 41.0 41 36.71176168741729 39.0 35.0 41.0 31.0 41.0 42 36.642099548977775 39.0 35.0 41.0 31.0 41.0 43 36.52902152483323 39.0 35.0 41.0 31.0 41.0 44 36.439579766116616 39.0 35.0 41.0 31.0 41.0 45 36.43202905987523 39.0 35.0 41.0 31.0 41.0 46 36.23926270019175 38.0 35.0 40.0 30.0 41.0 47 36.164672266184134 38.0 35.0 40.0 30.0 41.0 48 36.07874578010641 38.0 35.0 40.0 30.0 41.0 49 36.09997785399843 38.0 35.0 40.0 30.0 41.0 50 35.92693277878305 38.0 35.0 40.0 30.0 41.0 51 34.874086477435384 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 13.0 9 24.0 10 38.0 11 38.0 12 35.0 13 38.0 14 40.0 15 60.0 16 89.0 17 179.0 18 356.0 19 582.0 20 1116.0 21 1738.0 22 2624.0 23 3922.0 24 6077.0 25 9037.0 26 12494.0 27 15524.0 28 18245.0 29 21242.0 30 26514.0 31 34072.0 32 44620.0 33 63284.0 34 107963.0 35 139677.0 36 156639.0 37 235480.0 38 391009.0 39 558354.0 40 227.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.848921057606614 4.298646933318929 54.99997299268101 16.852459016393443 2 20.6073405892997 4.269262970264942 53.69454722229724 21.428849218138115 3 21.172549760985227 4.201204526426661 52.33159586247873 22.29464985010938 4 18.733032651848653 4.791314446214924 51.63615739865504 24.839495503281388 5 17.36403165257785 7.674345747697626 50.31339292948389 24.648229670240635 6 21.51089745320982 7.596240581197504 53.40054554784347 17.49231641774921 7 85.00467226618413 2.063845302076863 8.848569962459827 4.082912469279175 8 87.47659815810084 2.425095200799417 6.57055662084425 3.5277500202554894 9 81.84524806222487 5.069813919572204 8.515083587652255 4.569854430550679 10 37.64053258433036 29.791557512085774 16.23977097793502 16.32813892564885 11 29.45310179058525 25.497555837631996 25.098819780160426 19.95052259162233 12 25.989899262700188 22.796607880735678 30.762092527074834 20.451400329489292 13 23.832392578388745 22.94801091095687 32.06119858481649 21.158397925837903 14 21.488751451643395 24.464525886515247 31.387311961541574 22.65941070029978 15 20.15205120587679 23.965970778080862 33.6670537715721 22.214924244470254 16 22.353417776217356 22.44842952440111 32.43870688956707 22.75944580981446 17 22.516325924325493 22.591028168633702 30.2030950387555 24.689550868285306 18 23.26226807464823 22.496934669295378 30.360871796256784 23.879925459799605 19 24.50266022091987 24.43546601128906 28.66886326194399 22.393010505847087 20 27.131282577578524 23.811542928133527 28.030950387555027 21.026224106732926 21 26.85926486077727 23.885434952872227 27.609906284603124 21.645393901747372 22 24.594052988359845 23.87101304453507 27.208091392767443 24.326842574337647 23 23.744240689226782 25.149539525211335 27.111135117616875 23.99508466794501 24 23.044373025089797 23.695897588246414 29.034596375617795 24.225133011045994 25 23.503119345342586 25.187295757150185 27.20166365084938 24.107921246657842 26 22.913495557296027 25.300186350500987 27.67861290409701 24.107705188105978 27 22.646123099359926 24.492019337240393 28.898209414751395 23.963648148648282 28 21.61195884084587 24.850892591892404 30.12817673589543 23.4089718313663 29 23.373754287411888 23.792691819483082 28.81065168660707 24.02290220649796 30 24.019121181840276 24.45555945661274 28.82350717044319 22.70181219110379 31 24.28093013206579 25.88073567936911 26.881086774515893 22.957247414049206 32 23.91265833040754 26.044562076322684 27.491722256731578 22.551057336538204 33 24.295135981851082 25.05339346963027 27.163151213978985 23.48831933453966 34 23.20722715855997 24.953412374753558 28.342290760796175 23.497069705890297 35 23.292516271909687 25.09908985335026 27.81175898668539 23.796634888054662 36 23.904070002970805 26.90199043940908 26.715315850595513 22.478623707024603 37 24.010154751937776 26.892753936316744 27.344154265806033 21.75293704593945 38 23.202960002160587 26.51081643125287 27.525481405460877 22.760742161125666 39 23.280362978367137 25.891970724066223 27.17557458071137 23.652091716855267 40 23.996813136359954 25.40313825046588 28.535879223269507 22.064169389904663 41 21.418100305182705 25.701623139870904 28.724606368325816 24.155670186620572 42 21.861182380425095 25.9753693250871 27.350906095551895 24.812542198935912 43 22.367461582088747 24.42849812299133 28.723201987738676 24.480838307181248 44 23.030761336322144 24.466632457395953 28.692413644097552 23.81019256218435 45 23.480271153482594 24.21562643476382 27.440678423852866 24.86342398790072 46 22.702946498501095 25.33324330893672 28.020093445323685 23.943716747238504 47 22.047532881410863 25.713290301671755 29.329516298917007 22.909660518000376 48 22.07313581980717 24.481378453560914 29.186269479028816 24.2592162476031 49 22.765819537094554 24.61781942906528 29.084127798633432 23.53223323520674 50 22.300483431009805 24.27023523374835 28.90112620520161 24.52815513004024 51 21.364679828233452 24.139033678126772 28.12261322818484 26.37367326545494 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 276.0 1 1288.0 2 2300.0 3 6800.0 4 11300.0 5 7722.0 6 4144.0 7 4008.5 8 3873.0 9 3938.0 10 4003.0 11 4095.5 12 4188.0 13 4232.0 14 4276.0 15 4218.0 16 4160.0 17 3938.0 18 3716.0 19 4046.0 20 4376.0 21 4747.0 22 5118.0 23 6315.5 24 7513.0 25 9011.5 26 13127.5 27 15745.0 28 19649.0 29 23553.0 30 25615.0 31 27677.0 32 32684.5 33 37692.0 34 44839.0 35 51986.0 36 54760.5 37 57535.0 38 63328.5 39 69122.0 40 76939.0 41 84756.0 42 92077.5 43 99399.0 44 109182.0 45 118965.0 46 129449.0 47 139933.0 48 153729.5 49 167526.0 50 165158.5 51 162791.0 52 147658.5 53 132526.0 54 121292.5 55 110059.0 56 104302.0 57 98545.0 58 94653.0 59 90761.0 60 86135.5 61 81510.0 62 73410.0 63 65310.0 64 56554.0 65 47798.0 66 41243.0 67 34688.0 68 28733.0 69 22778.0 70 19210.5 71 15643.0 72 12808.0 73 9973.0 74 8524.5 75 5569.0 76 4062.0 77 3187.5 78 2313.0 79 1641.0 80 969.0 81 746.5 82 524.0 83 375.5 84 227.0 85 157.0 86 87.0 87 66.5 88 46.0 89 28.5 90 11.0 91 9.5 92 8.0 93 5.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1851350.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.67499025864129 #Duplication Level Percentage of deduplicated Percentage of total 1 75.43476628060422 21.630911882592084 2 9.888666675491962 5.671148411813655 3 3.219425455948763 2.7695098076325775 4 1.5194844892010957 1.7428481170399184 5 0.9263392415149875 1.3281384363319713 6 0.6485522882702278 1.115833832902098 7 0.4941056574058434 0.9917932438996475 8 0.39986147711112174 0.9172819168773867 9 0.342351679728076 0.8835237973108857 >10 6.48281267945917 48.032779166633915 >50 0.575235858072016 9.907292586521645 >100 0.06367459624227426 3.074932594099039 >500 0.0032120622461702946 0.6758402459084923 >1k 0.0013226138660701213 0.9276143057719495 >5k 1.889448380100173E-4 0.33055165466471953 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6101 0.32954330623598993 No Hit CCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCTGC 4497 0.24290382693709997 TruSeq Adapter, Index 15 (95% over 22bp) CTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCTGCT 3536 0.1909957598509196 TruSeq Adapter, Index 14 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCTGC 2485 0.13422637534771922 TruSeq Adapter, Index 15 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCTGC 2360 0.1274745456018581 TruSeq Adapter, Index 15 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.160585518675561E-4 0.0 0.0 0.20266292165176764 0.0 2 2.160585518675561E-4 0.0 0.0 0.7554487266049099 0.0 3 2.160585518675561E-4 0.0 0.0 1.0904475112755556 0.0 4 2.160585518675561E-4 0.0 0.0 1.4498068976692684 0.0 5 2.160585518675561E-4 0.0 0.0 2.028195641018716 0.0 6 2.160585518675561E-4 0.0 0.0 2.6124719799065548 0.0 7 2.160585518675561E-4 0.0 0.0 3.1045993464228805 0.0 8 2.160585518675561E-4 0.0 0.0 3.876414508331758 0.0 9 2.160585518675561E-4 0.0 0.0 4.320360817781618 0.0 10 2.160585518675561E-4 0.0 0.0 4.973505820077241 0.0 11 2.160585518675561E-4 0.0 0.0 6.071461366030194 0.0 12 2.7007318983444516E-4 0.0 0.0 6.992356928727685 0.0 13 2.7007318983444516E-4 0.0 0.0 7.294838901342263 0.0 14 2.7007318983444516E-4 0.0 0.0 7.410214168039539 0.0 15 2.7007318983444516E-4 0.0 0.0 7.576957355443325 0.0 16 2.7007318983444516E-4 0.0 0.0 7.966294865908662 0.0 17 2.7007318983444516E-4 0.0 0.0 8.520377022173008 0.0 18 2.7007318983444516E-4 0.0 0.0 9.10686796121749 0.0 19 2.7007318983444516E-4 0.0 0.0 9.492910578766846 0.0 20 3.240878278013342E-4 0.0 0.0 9.923191184811083 0.0 21 3.240878278013342E-4 0.0 0.0 10.534906959786102 0.0 22 3.240878278013342E-4 0.0 0.0 11.20236584114295 0.0 23 3.240878278013342E-4 0.0 0.0 11.838064115375266 0.0 24 3.240878278013342E-4 0.0 0.0 12.365733113673805 0.0 25 3.240878278013342E-4 0.0 0.0 12.8181057066465 0.0 26 3.240878278013342E-4 0.0 0.0 13.213924973667863 0.0 27 3.240878278013342E-4 0.0 0.0 13.62443622221622 0.0 28 3.240878278013342E-4 0.0 0.0 14.055635077105896 0.0 29 3.781024657682232E-4 0.0 0.0 14.519026656223836 0.0 30 3.781024657682232E-4 0.0 0.0 15.0442109811759 0.0 31 4.321171037351122E-4 0.0 0.0 15.509925189726415 0.0 32 4.321171037351122E-4 0.0 0.0 15.980608744969887 0.0 33 4.321171037351122E-4 0.0 0.0 16.434655791719557 0.0 34 4.321171037351122E-4 0.0 0.0 16.903448834634187 0.0 35 4.321171037351122E-4 0.0 0.0 17.408917816728334 0.0 36 4.321171037351122E-4 0.0 0.0 17.872633483674075 0.0 37 4.321171037351122E-4 0.0 0.0 18.354822156804495 0.0 38 5.401463796688903E-4 0.0 0.0 18.81902395549194 0.0 39 5.401463796688903E-4 0.0 0.0 19.29802576498231 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACGAG 25 3.8917322E-5 45.0 38 TAACGGG 55 6.184564E-11 40.909092 3 TACGAAT 275 0.0 40.909092 12 TTGGGAC 3930 0.0 37.958015 5 CGTTTTT 3565 0.0 37.86816 1 TACGGGA 370 0.0 37.702705 4 CTAACGG 30 1.14019116E-4 37.500004 2 CGCTAAT 30 1.14019116E-4 37.500004 44 TTTGGGA 10420 0.0 37.226486 4 TATGGGA 1070 0.0 37.219627 4 CGTTTGG 1290 0.0 36.97674 2 TTTGGGC 5640 0.0 36.781918 4 TTGGGAT 5480 0.0 36.541973 5 TGGGCGA 3880 0.0 36.243557 6 ATAACGC 50 4.8818038E-8 36.0 11 CCTATCG 25 0.0021074403 36.0 32 TATCGTG 25 0.0021074403 36.0 1 GCTACGA 330 0.0 35.454544 10 TCGTTCA 420 0.0 35.357143 16 TCGTTTG 655 0.0 35.038166 1 >>END_MODULE