##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933202.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 507413 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.1363445556184 33.0 31.0 34.0 30.0 34.0 2 32.33388777977702 34.0 31.0 34.0 30.0 34.0 3 32.38609377371096 34.0 31.0 34.0 30.0 34.0 4 35.90147276478923 37.0 35.0 37.0 35.0 37.0 5 35.075112383797816 37.0 35.0 37.0 33.0 37.0 6 34.776113343568255 37.0 35.0 37.0 32.0 37.0 7 35.55663138311395 37.0 35.0 37.0 33.0 37.0 8 35.82491185681092 37.0 35.0 37.0 35.0 37.0 9 37.6552689820718 39.0 37.0 39.0 35.0 39.0 10 37.240823550047004 39.0 37.0 39.0 34.0 39.0 11 37.192415251481535 39.0 37.0 39.0 34.0 39.0 12 37.01501144038485 39.0 37.0 39.0 33.0 39.0 13 36.92860253876034 39.0 37.0 39.0 33.0 39.0 14 37.87550181016253 40.0 37.0 41.0 33.0 41.0 15 37.998858917686384 40.0 37.0 41.0 33.0 41.0 16 38.04392280055891 40.0 37.0 41.0 33.0 41.0 17 38.02139677146624 40.0 37.0 41.0 33.0 41.0 18 37.958871767179794 40.0 37.0 41.0 33.0 41.0 19 37.93654872855051 40.0 37.0 41.0 33.0 41.0 20 37.78162561857895 40.0 36.0 41.0 33.0 41.0 21 37.66201299533122 39.0 36.0 41.0 33.0 41.0 22 37.721566061571146 39.0 36.0 41.0 33.0 41.0 23 37.64476471828668 39.0 35.0 41.0 33.0 41.0 24 37.563359630123784 39.0 35.0 41.0 33.0 41.0 25 37.43559979740369 39.0 35.0 41.0 33.0 41.0 26 37.384875830930625 39.0 35.0 41.0 33.0 41.0 27 37.306166771446534 39.0 35.0 41.0 32.0 41.0 28 37.21183532940622 39.0 35.0 41.0 32.0 41.0 29 37.07186453638358 39.0 35.0 41.0 32.0 41.0 30 36.93963694268771 39.0 35.0 41.0 31.0 41.0 31 36.81226338308242 39.0 35.0 41.0 31.0 41.0 32 36.72491638960768 39.0 35.0 41.0 31.0 41.0 33 36.517330064464254 39.0 35.0 41.0 30.0 41.0 34 36.32721274385954 39.0 35.0 41.0 30.0 41.0 35 36.17676724876974 39.0 35.0 40.0 30.0 41.0 36 36.01075652377846 38.0 35.0 40.0 29.0 41.0 37 35.97418670786913 38.0 35.0 40.0 29.0 41.0 38 35.85537225100658 38.0 35.0 40.0 29.0 41.0 39 35.77866944678201 38.0 35.0 40.0 29.0 41.0 40 35.67583605465371 38.0 35.0 40.0 28.0 41.0 41 35.545945807458615 38.0 35.0 40.0 27.0 41.0 42 35.47322201047273 38.0 35.0 40.0 27.0 41.0 43 35.325342472502676 38.0 34.0 40.0 27.0 41.0 44 35.268786964464844 38.0 34.0 40.0 27.0 41.0 45 35.266333341873384 38.0 34.0 40.0 27.0 41.0 46 35.08184654315124 37.0 34.0 40.0 26.0 41.0 47 34.984089883388876 37.0 34.0 40.0 26.0 41.0 48 34.88819955342098 37.0 34.0 40.0 26.0 41.0 49 34.943489819929724 37.0 34.0 40.0 26.0 41.0 50 34.74578499171287 37.0 34.0 40.0 26.0 41.0 51 33.704455739210466 36.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 12.0 10 13.0 11 17.0 12 11.0 13 13.0 14 13.0 15 18.0 16 51.0 17 84.0 18 203.0 19 312.0 20 580.0 21 886.0 22 1360.0 23 1842.0 24 2654.0 25 4270.0 26 5910.0 27 6921.0 28 7502.0 29 8555.0 30 10010.0 31 12354.0 32 16055.0 33 22303.0 34 34864.0 35 39136.0 36 46251.0 37 67381.0 38 104032.0 39 113750.0 40 47.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.99088513695944 4.519986677519102 51.951369003159165 18.537759182362297 2 23.679330249717687 4.211559420038509 49.29022315155505 22.818887178688758 3 21.184912487460906 4.648678689745829 51.53257799859286 22.633830824200405 4 19.021191810221655 4.889705230256221 50.57063969586905 25.51846326365308 5 17.377166134884206 7.877409526362154 50.081885958775196 24.66353837997844 6 21.73101595741536 7.444625975290345 52.97755477293644 17.846803294357848 7 79.36178221685294 2.229938925490675 13.196942135893247 5.21133672176314 8 80.55449899785776 2.8176258787220667 11.20921221963174 5.418662903788433 9 74.02924245141531 5.843760408188202 13.767483292702396 6.359513847694087 10 36.22670290276363 26.261447775283646 20.911762213423778 16.60008710852895 11 29.82245232187587 22.730202024780603 27.680607315933965 19.766738337409564 12 25.638286760488988 20.73537729620644 33.81939366945664 19.80694227384793 13 24.72266181591721 21.026461679144997 34.838287548801475 19.41258895613632 14 20.467548131403806 22.837018365709984 36.15733140459547 20.538102098290743 15 19.06514023093614 22.14350046214819 36.78206904434849 22.00929026256718 16 22.452321875868375 22.25327297487451 32.68402662131243 22.61037852794469 17 22.555787888761223 21.869758953751678 31.031723664943545 24.54272949254355 18 24.057720239725825 20.584021300203187 32.44792703379692 22.910331426274062 19 23.84645249530461 23.24832040172404 29.974596630358306 22.93063047261304 20 24.79873397015843 25.426230703588597 29.774562338765463 20.000472987487512 21 24.6942825666666 24.659399739462724 30.29110409075053 20.35521360312014 22 22.617473340257344 22.599736309475713 31.007285978088856 23.775504372178087 23 22.055209464479624 24.345454294627846 30.260754060301963 23.338582180590564 24 22.510262843088373 24.301702952033153 29.718197996503836 23.469836208374637 25 23.487967395395863 24.592590256851913 27.178649344813792 24.740793002938435 26 21.924152514815347 23.98342178856277 27.970706308273535 26.121719388348346 27 22.23021483485839 23.191167746983226 30.15847051612789 24.420146902030496 28 20.891069010845207 24.356490669336416 28.998468703009184 25.753971616809185 29 21.688250005419647 25.432734281541858 28.352643704438 24.52637200860049 30 23.962334429744605 24.24474737541214 28.629341384631452 23.1635768102118 31 24.502131399865593 25.06143910384637 27.21629126569481 23.220138230593225 32 24.655261098947012 24.635553286967422 26.75118690297647 23.957998711109095 33 24.055355302288273 24.597714287966607 27.156182439157057 24.19074797058806 34 21.934006420805144 23.766044622427884 29.53925106372915 24.760697893037822 35 22.052844527042073 25.348779002508802 27.9772098862268 24.62116658422232 36 23.75027837284421 27.161109392151957 26.426599239672615 22.662012995331217 37 23.114307280262825 27.037935567279515 27.10651875296849 22.741238399489173 38 23.72958517026564 26.02436279716917 28.196951989799235 22.04910004276595 39 23.046315328933236 24.212623641885404 28.05328204046802 24.687778988713337 40 24.7906537672468 23.6881987651085 28.328994330062496 23.192153137582206 41 21.63622138179353 23.92745160254073 27.402333010782144 27.033994004883592 42 22.69906368185285 23.90577300936318 28.950184563659185 24.44497874512478 43 22.93871067552467 23.062278656636703 30.050668784599527 23.948341883239095 44 23.599710689320137 23.271772697979753 28.27125044096229 24.857266171737816 45 22.656494807976934 22.653735714299792 27.413763541730308 27.27600593599297 46 22.433008220128375 23.58473275221565 28.44329963954412 25.538959388111852 47 20.37255647766218 24.9398419039323 30.645450550143572 24.042151068261948 48 20.696749984726445 25.2287584275531 29.794270150745056 24.280221436975403 49 22.85692325580937 23.20634276220751 30.1630033128832 23.773730669099923 50 21.591287570480063 22.885105426940186 28.987432328300617 26.53617467427914 51 20.741092561680524 22.832682647074474 27.96006408980456 28.466160701440447 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 76.0 1 245.5 2 415.0 3 3452.0 4 6489.0 5 4189.0 6 1889.0 7 1968.0 8 2047.0 9 2090.5 10 2134.0 11 2145.0 12 2156.0 13 2109.0 14 2062.0 15 2037.0 16 2012.0 17 1939.0 18 1866.0 19 1904.5 20 1943.0 21 2000.0 22 2057.0 23 2230.5 24 2404.0 25 2705.5 26 3407.5 27 3808.0 28 4394.0 29 4980.0 30 5722.5 31 6465.0 32 7191.0 33 7917.0 34 9135.5 35 10354.0 36 11199.0 37 12044.0 38 13119.0 39 14194.0 40 15897.5 41 17601.0 42 20192.0 43 22783.0 44 26562.5 45 30342.0 46 35404.5 47 40467.0 48 46126.0 49 51785.0 50 50223.0 51 48661.0 52 43693.0 53 38725.0 54 35962.0 55 33199.0 56 31887.5 57 30576.0 58 28558.0 59 26540.0 60 23762.0 61 20984.0 62 19009.5 63 17035.0 64 14942.5 65 12850.0 66 10916.5 67 8983.0 68 7366.5 69 5750.0 70 4894.5 71 4039.0 72 3400.0 73 2761.0 74 2301.0 75 1520.0 76 1199.0 77 869.0 78 539.0 79 380.0 80 221.0 81 174.5 82 128.0 83 91.0 84 54.0 85 36.0 86 18.0 87 11.5 88 5.0 89 5.5 90 6.0 91 3.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 507413.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.91354805016581 #Duplication Level Percentage of deduplicated Percentage of total 1 73.09685022146834 34.29232595180628 2 8.486968654984912 7.963076235917716 3 4.659362946109934 6.5576174236647145 4 3.5542338902741992 6.669668895716256 5 2.770894691949583 6.499625063636307 6 2.146424044517211 6.041782052909364 7 1.5840255845673457 5.201858226200451 8 1.109455287127975 4.163878713775101 9 0.7665771550187109 3.236656877651673 >10 1.7360894561186841 11.809893514267712 >50 0.05038918793333373 1.6393209523615715 >100 0.034980923807603974 3.168455151746536 >500 0.0012493187074144275 0.38643509003296633 >1k 0.002498637414828855 2.369405850313355 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4081 0.804275806887092 No Hit CTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTCTGCT 2096 0.41307573909221873 Illumina Single End Adapter 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTCTGC 1913 0.377010443169568 No Hit GCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTCTGC 1600 0.3153249916734494 No Hit CCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTCTGC 1421 0.28004800822998227 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCC 1017 0.2004284478324363 No Hit TCCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTCTG 771 0.15194723036264346 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 628 0.12376505923182891 No Hit TTCCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTCT 579 0.11410823136182953 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.970781197959059E-4 0.0 0.0 0.44539655073874734 0.0 2 1.970781197959059E-4 0.0 0.0 1.5255817253401076 0.0 3 1.970781197959059E-4 0.0 0.0 2.2545736904651634 0.0 4 1.970781197959059E-4 0.0 0.0 3.2178915400275514 0.0 5 1.970781197959059E-4 0.0 0.0 4.661291689412766 0.0 6 1.970781197959059E-4 0.0 0.0 5.781089566093104 0.0 7 1.970781197959059E-4 0.0 0.0 6.737509681462635 0.0 8 1.970781197959059E-4 0.0 0.0 8.059312630933777 0.0 9 1.970781197959059E-4 0.0 0.0 8.996222012443512 0.0 10 1.970781197959059E-4 0.0 0.0 10.277821025476289 0.0 11 1.970781197959059E-4 0.0 0.0 12.087983555801685 0.0 12 1.970781197959059E-4 0.0 0.0 13.518179471160574 0.0 13 1.970781197959059E-4 0.0 0.0 14.088326471730129 0.0 14 1.970781197959059E-4 0.0 0.0 14.351622839777459 0.0 15 1.970781197959059E-4 0.0 0.0 14.656699769221522 0.0 16 1.970781197959059E-4 0.0 0.0 15.26862733118781 0.0 17 1.970781197959059E-4 0.0 0.0 16.13163241777408 0.0 18 1.970781197959059E-4 0.0 0.0 17.067359330565044 0.0 19 1.970781197959059E-4 0.0 0.0 17.63790048737419 0.0 20 3.941562395918118E-4 0.0 0.0 18.21750723769395 0.0 21 3.941562395918118E-4 0.0 0.0 18.86293808002554 0.0 22 3.941562395918118E-4 0.0 0.0 19.46855914215836 0.0 23 3.941562395918118E-4 0.0 0.0 20.043633095722814 0.0 24 3.941562395918118E-4 0.0 0.0 20.505584208524418 0.0 25 3.941562395918118E-4 0.0 0.0 20.924572291210513 0.0 26 3.941562395918118E-4 0.0 0.0 21.316363593364773 0.0 27 3.941562395918118E-4 0.0 0.0 21.742249410243726 0.0 28 5.912343593877177E-4 0.0 0.0 22.153354368137986 0.0 29 5.912343593877177E-4 0.0 0.0 22.585743762970203 0.0 30 5.912343593877177E-4 0.0 0.0 23.124358264372415 0.0 31 5.912343593877177E-4 0.0 0.0 23.536842769105245 0.0 32 5.912343593877177E-4 0.0 0.0 23.95977241418726 0.0 33 5.912343593877177E-4 0.0 0.0 24.361811778570907 0.0 34 5.912343593877177E-4 0.0 0.0 24.800310595116798 0.0 35 5.912343593877177E-4 0.0 0.0 25.269750676470647 0.0 36 5.912343593877177E-4 0.0 0.0 25.681249790604497 0.0 37 5.912343593877177E-4 0.0 0.0 26.087624873623657 0.0 38 5.912343593877177E-4 0.0 0.0 26.55568540813893 0.0 39 5.912343593877177E-4 0.0 0.0 27.22200653116889 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATAACG 20 7.0295564E-4 45.000004 17 GGTTCGC 20 7.0295564E-4 45.000004 11 TCGTTAG 25 3.8877148E-5 45.0 1 CGTTTTT 2110 0.0 42.8673 1 TAGGGCG 75 0.0 42.000004 5 CACCGCA 65 0.0 41.538464 34 CGTTCAT 115 0.0 41.086956 17 TGTACGG 50 1.0786607E-9 40.5 2 TCGTTTG 155 0.0 39.193546 1 GTACGGG 65 9.094947E-12 38.076927 3 TTTGGGC 1140 0.0 37.894737 4 TTACACG 535 0.0 37.850468 34 TCGTTCA 125 0.0 37.800003 16 CTTGGGA 1130 0.0 37.234516 4 ACACGCG 540 0.0 37.083332 36 AGGCACG 110 0.0 36.81818 10 TTGGGAA 1030 0.0 36.699028 5 TACGGGA 105 0.0 36.428574 4 TACACGC 550 0.0 36.409092 35 TTTTGCG 340 0.0 36.397057 1 >>END_MODULE