##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933197.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 447706 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.12962747874721 33.0 31.0 34.0 30.0 34.0 2 32.320518375898466 34.0 31.0 34.0 30.0 34.0 3 32.39758234198335 34.0 31.0 34.0 30.0 34.0 4 35.898232322104235 37.0 35.0 37.0 35.0 37.0 5 35.09254064050962 37.0 35.0 37.0 35.0 37.0 6 34.781771966424394 37.0 35.0 37.0 32.0 37.0 7 35.514111939531745 37.0 35.0 37.0 33.0 37.0 8 35.79611620125708 37.0 35.0 37.0 35.0 37.0 9 37.63264955126802 39.0 37.0 39.0 35.0 39.0 10 37.219742420249005 39.0 37.0 39.0 34.0 39.0 11 37.18538281818872 39.0 37.0 39.0 34.0 39.0 12 37.08093480989756 39.0 37.0 39.0 33.0 39.0 13 37.0617704475705 39.0 37.0 39.0 33.0 39.0 14 38.18222226193082 40.0 37.0 41.0 33.0 41.0 15 38.245332874699024 40.0 37.0 41.0 33.0 41.0 16 38.23107351699553 40.0 37.0 41.0 33.0 41.0 17 38.17953299710078 40.0 37.0 41.0 33.0 41.0 18 38.146917843406165 40.0 37.0 41.0 33.0 41.0 19 38.16453878214721 40.0 37.0 41.0 34.0 41.0 20 38.06993205362448 40.0 37.0 41.0 34.0 41.0 21 37.95854422321791 40.0 37.0 41.0 33.0 41.0 22 37.98693338932246 40.0 37.0 41.0 33.0 41.0 23 37.90110921006196 40.0 37.0 41.0 33.0 41.0 24 37.84855239822562 40.0 36.0 41.0 33.0 41.0 25 37.73076974621738 40.0 36.0 41.0 33.0 41.0 26 37.678570311767096 40.0 36.0 41.0 33.0 41.0 27 37.65420834208163 40.0 36.0 41.0 33.0 41.0 28 37.56642528802384 40.0 36.0 41.0 33.0 41.0 29 37.487339906099095 39.0 36.0 41.0 33.0 41.0 30 37.39198715228297 39.0 36.0 41.0 32.0 41.0 31 37.291954988318224 39.0 36.0 41.0 32.0 41.0 32 37.25041880162428 39.0 35.0 41.0 32.0 41.0 33 37.14645101919563 39.0 35.0 41.0 32.0 41.0 34 36.98541453543174 39.0 35.0 41.0 31.0 41.0 35 36.86456960594676 39.0 35.0 41.0 31.0 41.0 36 36.75490165421058 39.0 35.0 41.0 31.0 41.0 37 36.70019164362327 39.0 35.0 41.0 31.0 41.0 38 36.58325106208092 39.0 35.0 40.0 30.0 41.0 39 36.52958861395648 39.0 35.0 40.0 30.0 41.0 40 36.42288242730721 39.0 35.0 40.0 30.0 41.0 41 36.32181833614023 39.0 35.0 40.0 30.0 41.0 42 36.25376698100986 38.0 35.0 40.0 30.0 41.0 43 36.0965075294948 38.0 35.0 40.0 30.0 41.0 44 36.02656207421835 38.0 35.0 40.0 30.0 41.0 45 36.02656877504434 38.0 35.0 40.0 30.0 41.0 46 35.83978325061536 38.0 35.0 40.0 29.0 41.0 47 35.74495316122634 38.0 35.0 40.0 29.0 41.0 48 35.65793400133123 38.0 35.0 40.0 29.0 41.0 49 35.696157746378205 38.0 35.0 40.0 29.0 41.0 50 35.49524911437417 38.0 34.0 40.0 28.0 41.0 51 34.44441441481687 36.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 6.0 10 18.0 11 13.0 12 5.0 13 8.0 14 13.0 15 19.0 16 32.0 17 58.0 18 108.0 19 220.0 20 380.0 21 635.0 22 951.0 23 1337.0 24 1704.0 25 2349.0 26 3272.0 27 3981.0 28 4712.0 29 5849.0 30 7484.0 31 9502.0 32 12617.0 33 17340.0 34 28241.0 35 35870.0 36 42067.0 37 61836.0 38 97276.0 39 109756.0 40 45.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.377368183584764 4.391721352852095 53.772341670649936 16.458568792913205 2 21.047517790693 4.683654005083693 51.86260626393213 22.406221940291175 3 21.582913787172835 4.526184594354331 50.65288381214458 23.23801780632826 4 19.120806958137706 4.888699280331289 50.08889762478055 25.901596136750456 5 17.309573693450613 8.07248506832609 49.20349515083559 25.414446087387706 6 21.710452841820302 7.745931481820659 52.43530352508119 18.108312151277847 7 80.65560881471323 2.368965347795205 11.235274934890308 5.74015090260126 8 82.0844482763242 2.892969940094616 9.042988032324786 5.979593751256405 9 75.21610163812859 6.164089826805984 11.799931204853186 6.819877330212237 10 36.19116116379946 27.070443550008267 19.045981067932974 17.6924142182593 11 26.78543508463143 24.90607675572809 26.669957516763233 21.638530642877246 12 22.712002966232305 22.005959267912427 34.271821239831496 21.010216526023775 13 23.499796741611682 22.434365409442805 34.06565916025249 20.000178688693026 14 20.475937333875354 25.56945852858796 32.61828074674005 21.33632339079664 15 18.367634117032157 23.94160453511903 35.08217446270543 22.608586885143374 16 20.620228453494033 23.558317288577772 30.87048196807726 24.950972289850927 17 20.79891714652026 23.219702215293072 29.221408692311474 26.759971945875193 18 22.00863959830782 22.38745962752342 31.152140020459857 24.451760753708907 19 23.001478648934793 23.753311324842645 29.665003372749084 23.580206653473486 20 25.225036072779904 24.114039123889338 28.63307617052262 22.027848632808137 21 25.230396733570693 24.63581010752592 28.563610941108674 21.570182217794713 22 22.982716336167037 23.929989770072325 27.891294733597494 25.19599916016314 23 22.668224236440878 24.39257012414397 27.116232527596235 25.822973111818914 24 23.646321469893188 23.806247850151664 27.66771050644843 24.87972017350672 25 22.026285106744158 24.753074562324382 27.08339848025267 26.137241850678794 26 21.56325803093995 24.953429259380037 28.193278624811818 25.290034084868196 27 22.150697109263668 23.98717015184072 28.49124202043305 25.37089071846256 28 20.17373008179475 24.000795164683968 29.258486596114412 26.56698815740687 29 21.41807346785614 24.3662135419226 28.12269659106646 26.0930163991548 30 23.256780119096014 24.79841681817979 26.9882467512162 24.956556311508 31 22.801347312745417 28.02106739690779 24.122080115075516 25.05550517527127 32 22.622211897986624 28.521842459113795 24.29138765171787 24.56455799118171 33 23.690100199684615 25.826100163946876 24.826336926465135 25.657462709903374 34 21.561247783143404 25.70816562654957 26.706812059699892 26.02377453060714 35 22.16923606116514 26.09189959482339 26.475410202230925 25.263454141780546 36 24.75910530571402 25.650315162182324 26.35032811711257 23.240251414991086 37 22.92665275873006 27.49862633067236 25.82721696827829 23.74750394231929 38 21.24251182695787 29.567841395916073 24.64541462477608 24.54423215234998 39 22.950999093154884 27.307206068268012 25.25585987232693 24.485934966250174 40 22.69011360133659 26.580166448517556 26.57837956158729 24.151340388558562 41 20.98274313947099 27.00298856839086 25.822526390086352 26.191741902051792 42 23.638280478707006 25.296734910856678 25.766909534381938 25.298075076054378 43 24.440369349528485 23.707522347254674 26.779851062974362 25.07225724024248 44 22.340553845604035 23.45869834221565 26.970377881913578 27.23036993026674 45 22.75019767436666 23.910780735572004 26.152653750452302 27.186367839609026 46 22.842892433874017 24.5699186519725 28.126940447525833 24.460248466627654 47 20.16568909060857 26.440119185358245 28.8850272276896 24.509164496343583 48 20.39776103067638 25.325548462607156 29.179193488584026 25.097497018132437 49 22.553640112037808 23.162968555257244 29.688009541976207 24.595381790728737 50 21.93716412109733 23.143089438158075 27.98733990609909 26.9324065346455 51 21.113632607112702 22.672914814632815 27.402357797304482 28.811094780949997 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 119.0 1 236.5 2 354.0 3 1246.5 4 2139.0 5 1485.5 6 832.0 7 887.5 8 943.0 9 988.5 10 1034.0 11 1105.5 12 1177.0 13 1164.5 14 1152.0 15 1185.5 16 1219.0 17 1227.5 18 1236.0 19 1420.5 20 1605.0 21 1647.5 22 1690.0 23 1814.5 24 1939.0 25 2264.0 26 2877.0 27 3165.0 28 3630.0 29 4095.0 30 4751.5 31 5408.0 32 6173.5 33 6939.0 34 8049.5 35 9160.0 36 10420.0 37 11680.0 38 12498.0 39 13316.0 40 14870.0 41 16424.0 42 19277.5 43 22131.0 44 25615.5 45 29100.0 46 34317.0 47 39534.0 48 45644.5 49 51755.0 50 49408.5 51 47062.0 52 40349.0 53 33636.0 54 30218.5 55 26801.0 56 25570.5 57 24340.0 58 22550.0 59 20760.0 60 18935.5 61 17111.0 62 15796.5 63 14482.0 64 13238.5 65 11995.0 66 9755.5 67 7516.0 68 6121.5 69 4727.0 70 4041.5 71 3356.0 72 2759.0 73 2162.0 74 1834.0 75 1113.5 76 721.0 77 592.0 78 463.0 79 320.5 80 178.0 81 134.5 82 91.0 83 68.0 84 45.0 85 26.0 86 7.0 87 8.0 88 9.0 89 6.0 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 447706.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.16201611910587 #Duplication Level Percentage of deduplicated Percentage of total 1 73.91256900831684 32.641280639498135 2 7.978504921372842 7.046937258880659 3 3.7135335003783276 4.9199137890764195 4 2.7930923192829895 4.933943521053047 5 2.289351597953526 5.0551191085562195 6 2.0242247548127583 5.36363077504405 7 1.6965075835095373 5.244483667439348 8 1.3797843463234267 4.87472468345801 9 1.1050669299016291 4.392178521390592 >10 3.0192861136222606 18.035254155653703 >50 0.051840738435259125 1.625023441702547 >100 0.030701796548999842 2.6359120496694515 >500 0.0030198488408852303 0.8875281907690463 >1k 0.002516540700737692 2.344070197808756 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTGCT 3172 0.7085006678489902 No Hit TCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTGC 2584 0.5771644784747133 No Hit GCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTGC 1916 0.42795941979781377 No Hit CCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTGC 1712 0.38239380307612586 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1162 0.25954532662059476 No Hit TCCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTG 828 0.18494279728214497 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCC 738 0.16484031931669443 No Hit TTTCTGGGGTCTGATGAGCGTCGGCATCGGGCGCCTTAACCCGGCGTTCGG 660 0.1474181717466373 No Hit TTCCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCT 636 0.1420575109558505 No Hit GCCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTG 569 0.127092332914904 No Hit TTTTCTGGGGTCTGATGAGCGTCGGCATCGGGCGCCTTAACCCGGCGTTCG 562 0.1255288068509245 No Hit TGCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTG 499 0.1114570722751091 No Hit TTCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTG 469 0.10475624628662558 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.233608662827838E-4 0.0 0.0 0.763447440954555 0.0 2 2.233608662827838E-4 0.0 0.0 2.3220595658758203 0.0 3 2.233608662827838E-4 0.0 0.0 3.2550379043390083 0.0 4 2.233608662827838E-4 0.0 0.0 4.421651708933988 0.0 5 2.233608662827838E-4 0.0 0.0 6.085690162740727 0.0 6 2.233608662827838E-4 0.0 0.0 7.119404251897451 0.0 7 2.233608662827838E-4 0.0 0.0 8.01954854301707 0.0 8 2.233608662827838E-4 0.0 0.0 9.297396059020876 0.0 9 2.233608662827838E-4 0.0 0.0 10.108866086226229 0.0 10 2.233608662827838E-4 0.0 0.0 11.364600876468039 0.0 11 2.233608662827838E-4 0.0 0.0 13.362340464501257 0.0 12 2.233608662827838E-4 0.0 0.0 15.040003931151247 0.0 13 2.233608662827838E-4 0.0 0.0 15.65893689162084 0.0 14 2.233608662827838E-4 0.0 0.0 15.904857205398185 0.0 15 2.233608662827838E-4 0.0 0.0 16.237664896159533 0.0 16 2.233608662827838E-4 0.0 0.0 17.061196410144156 2.233608662827838E-4 17 2.233608662827838E-4 0.0 0.0 18.336586956618852 2.233608662827838E-4 18 2.233608662827838E-4 0.0 0.0 19.664020584937436 2.233608662827838E-4 19 2.233608662827838E-4 0.0 0.0 20.45159099945053 2.233608662827838E-4 20 2.233608662827838E-4 0.0 0.0 21.23134378364373 2.233608662827838E-4 21 2.233608662827838E-4 0.0 0.0 22.0633630105471 2.233608662827838E-4 22 2.233608662827838E-4 0.0 0.0 22.830830947094746 2.233608662827838E-4 23 2.233608662827838E-4 0.0 0.0 23.550499658257873 2.233608662827838E-4 24 2.233608662827838E-4 0.0 0.0 24.133024797523376 2.233608662827838E-4 25 2.233608662827838E-4 0.0 0.0 24.619058042554713 2.233608662827838E-4 26 2.233608662827838E-4 0.0 0.0 25.054835092672423 2.233608662827838E-4 27 2.233608662827838E-4 0.0 0.0 25.505130599098514 2.233608662827838E-4 28 2.233608662827838E-4 0.0 0.0 26.003225330909125 2.233608662827838E-4 29 2.233608662827838E-4 0.0 0.0 26.504670475713972 2.233608662827838E-4 30 2.233608662827838E-4 0.0 0.0 27.030908676676212 2.233608662827838E-4 31 2.233608662827838E-4 0.0 0.0 27.480534100503455 2.233608662827838E-4 32 2.233608662827838E-4 0.0 0.0 27.928819359133 2.233608662827838E-4 33 2.233608662827838E-4 0.0 0.0 28.371297235239197 2.233608662827838E-4 34 2.233608662827838E-4 0.0 0.0 28.824943154659532 2.233608662827838E-4 35 2.233608662827838E-4 0.0 0.0 29.29266080865568 2.233608662827838E-4 36 2.233608662827838E-4 0.0 0.0 29.73960590208753 2.233608662827838E-4 37 2.233608662827838E-4 0.0 0.0 30.164214908891104 2.233608662827838E-4 38 2.233608662827838E-4 0.0 0.0 30.594407937351743 2.233608662827838E-4 39 2.233608662827838E-4 0.0 0.0 31.023930883213538 2.233608662827838E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGAC 30 2.162522E-6 45.000004 26 CGTATGG 35 1.2097007E-7 45.000004 2 ACGTTAC 25 3.8869766E-5 45.000004 36 AAGCGTT 25 3.8869766E-5 45.000004 30 TAGTTCG 25 3.8869766E-5 45.000004 1 ACGCCTA 20 7.028669E-4 45.0 38 CGTTGGC 20 7.028669E-4 45.0 30 TTGCGAG 20 7.028669E-4 45.0 1 TCGTAAC 20 7.028669E-4 45.0 34 CACGTTA 20 7.028669E-4 45.0 35 CTACGGG 75 0.0 42.0 3 CGTTTGG 255 0.0 41.47059 2 TTACACG 125 0.0 41.399998 34 CGTTTTT 775 0.0 40.35484 1 TCTACGG 45 1.9237632E-8 40.0 2 TGCGGGT 120 0.0 39.375004 4 ATACTAT 210 0.0 38.57143 45 TCGTCGG 35 6.239745E-6 38.57143 2 CGAGATA 130 0.0 38.07692 19 GCCGATT 95 0.0 37.894737 9 >>END_MODULE