SRR2933192.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933192.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1353465
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGCT	3717	0.27462845363566846	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3672	0.27130365395484923	No Hit
GCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC	3183	0.2351741640899469	No Hit
TCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC	3143	0.2322187865958854	No Hit
CCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC	2348	0.17348065890141232	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGTCTA	30	2.1657888E-6	45.000004	31
GATCGAC	25	3.8911745E-5	45.0	9
TCGTTCA	235	0.0	42.12766	16
CTTCGAC	70	0.0	41.785717	21
TATCGCG	70	0.0	41.785717	32
CGTCTTA	40	3.4588265E-7	39.375004	42
TTTACGG	200	0.0	39.375	2
CGTTTGG	915	0.0	39.098362	2
GCGATAG	110	0.0	38.863636	9
TTCGGTA	70	0.0	38.57143	25
ACGTACC	35	6.249111E-6	38.57143	35
CGTTCAT	260	0.0	38.076927	17
TGCGACG	65	9.094947E-12	38.076927	1
GCGATCT	650	0.0	38.076923	9
CGTTTTT	2145	0.0	37.76224	1
TCGTTTG	555	0.0	37.7027	1
GTATGCG	30	1.140029E-4	37.500004	1
TTTGGGC	4025	0.0	37.118015	4
GGCGATA	225	0.0	37.0	8
TTGGGAC	2880	0.0	36.953125	5