##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933192.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1353465 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.14759450743093 33.0 31.0 34.0 30.0 34.0 2 32.32680268791583 34.0 31.0 34.0 30.0 34.0 3 32.401800563738256 34.0 31.0 34.0 30.0 34.0 4 35.89560129002228 37.0 35.0 37.0 35.0 37.0 5 35.09414946082832 37.0 35.0 37.0 35.0 37.0 6 34.795651162017485 37.0 35.0 37.0 32.0 37.0 7 35.61427595098507 37.0 35.0 37.0 33.0 37.0 8 35.88604212151773 37.0 35.0 37.0 35.0 37.0 9 37.72919063293103 39.0 38.0 39.0 35.0 39.0 10 37.19376267579878 39.0 37.0 39.0 34.0 39.0 11 37.14020458600702 39.0 37.0 39.0 34.0 39.0 12 37.00286671616924 39.0 37.0 39.0 33.0 39.0 13 36.96032849020847 39.0 37.0 39.0 33.0 39.0 14 38.101345066181985 40.0 37.0 41.0 33.0 41.0 15 38.20374076906311 40.0 37.0 41.0 33.0 41.0 16 38.19688207674376 40.0 37.0 41.0 33.0 41.0 17 38.14928055029129 40.0 37.0 41.0 33.0 41.0 18 38.08468634209233 40.0 37.0 41.0 33.0 41.0 19 38.083148068106674 40.0 37.0 41.0 34.0 41.0 20 37.994958864839504 40.0 37.0 41.0 33.0 41.0 21 37.87633148991662 40.0 36.0 41.0 33.0 41.0 22 37.92089045523896 40.0 36.0 41.0 33.0 41.0 23 37.82527956023983 40.0 36.0 41.0 33.0 41.0 24 37.76179952935613 40.0 36.0 41.0 33.0 41.0 25 37.64024411418101 39.0 36.0 41.0 33.0 41.0 26 37.61349499248226 39.0 36.0 41.0 33.0 41.0 27 37.58547136423919 39.0 36.0 41.0 33.0 41.0 28 37.52220485937944 39.0 36.0 41.0 33.0 41.0 29 37.46262962100978 39.0 36.0 41.0 33.0 41.0 30 37.38507682134374 39.0 36.0 41.0 32.0 41.0 31 37.32221815857817 39.0 35.0 41.0 32.0 41.0 32 37.28979027902458 39.0 35.0 41.0 32.0 41.0 33 37.18569818946186 39.0 35.0 41.0 32.0 41.0 34 37.061683161367306 39.0 35.0 41.0 31.0 41.0 35 36.921596051615666 39.0 35.0 41.0 31.0 41.0 36 36.78606687280425 39.0 35.0 41.0 31.0 41.0 37 36.76382396293957 39.0 35.0 41.0 31.0 41.0 38 36.67578991699084 39.0 35.0 41.0 31.0 41.0 39 36.6128662359204 39.0 35.0 41.0 31.0 41.0 40 36.49535451600152 39.0 35.0 41.0 30.0 41.0 41 36.38400180278027 39.0 35.0 40.0 30.0 41.0 42 36.285655705910386 39.0 35.0 40.0 30.0 41.0 43 36.1422334526567 38.0 35.0 40.0 30.0 41.0 44 36.07032468515994 38.0 35.0 40.0 30.0 41.0 45 36.08167037935964 38.0 35.0 40.0 30.0 41.0 46 35.88097364911542 38.0 35.0 40.0 29.0 41.0 47 35.813732161526154 38.0 35.0 40.0 29.0 41.0 48 35.71652240730274 38.0 35.0 40.0 29.0 41.0 49 35.757609542913926 38.0 35.0 40.0 29.0 41.0 50 35.55260978303835 38.0 34.0 40.0 28.0 41.0 51 34.45337337869838 36.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 15.0 10 22.0 11 24.0 12 22.0 13 19.0 14 18.0 15 43.0 16 78.0 17 114.0 18 275.0 19 502.0 20 878.0 21 1533.0 22 2195.0 23 3314.0 24 4942.0 25 7469.0 26 10443.0 27 13208.0 28 15391.0 29 18640.0 30 23213.0 31 29860.0 32 38954.0 33 53449.0 34 86692.0 35 110277.0 36 120611.0 37 178108.0 38 285897.0 39 347127.0 40 128.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.896764969910564 4.408314954579542 54.473517970542275 16.22140210496762 2 20.417003764412083 4.483972618427518 53.12667856206108 21.972345055099318 3 21.24044581869498 4.481608316432268 51.99033591559442 22.287609949278334 4 19.282138806692455 5.098765021629669 50.92255802698998 24.696538144687892 5 17.46472941671931 8.16046222104007 49.43179173454799 24.94301662769263 6 22.141983723258452 7.675706427576627 53.32055132567152 16.861758523493403 7 83.93870547077317 2.225325368590987 9.249444943164397 4.586524217471453 8 85.83938262164149 2.816253098528591 7.160214708174943 4.184149571654975 9 79.30681620876786 5.445947992744548 9.740554798240073 5.5066810002475135 10 37.39549969892092 28.30239422519238 17.46857140746159 16.833534668425116 11 29.38169808602365 25.317167418440818 25.051478981724685 20.24965551381085 12 25.42045786185827 22.321670674897394 31.674701599228644 20.583169864015694 13 23.736705419054058 22.884079012017303 32.84717373556021 20.532041833368428 14 20.74519843512762 25.105414620991308 32.079292778165666 22.070094165715403 15 19.18874887788011 23.627873642835244 35.578607500009234 21.604769979275414 16 21.048198512706275 22.31805033746717 33.19487389773655 23.438877252090005 17 21.50170118917002 22.005149745283404 30.27318770710731 26.219961358439264 18 22.208996907936296 22.210696249995383 31.939281769384504 23.641025072683817 19 23.809333820970622 24.00675303757393 29.607932233194063 22.57598090826139 20 26.3993527723288 23.788572294074836 28.564019017854175 21.248055915742185 21 25.53047178907471 24.562290122020148 28.399256722560246 21.5079813663449 22 23.86504268673368 23.57009601282634 27.536877569793088 25.027983730646895 23 22.83634966548821 25.057611390024864 27.690483315046936 24.415555629439993 24 22.87196196429165 23.62196288784712 29.863720155305085 23.642354992556143 25 22.368070101554157 24.960601123782293 28.016978643703382 24.654350130960164 26 21.90038161311892 25.523231114214255 28.138740196458716 24.4376470762081 27 21.514039890207727 24.569456912443247 29.006069606528428 24.910433590820595 28 20.425352705832807 24.147650659603315 30.93467507471564 24.49232155984824 29 21.243622849501094 23.493847273479552 29.494150199672692 25.768379677346665 30 22.487097930127486 24.645631767352683 28.98168774220242 23.88558256031741 31 22.42895087793183 26.01138559179587 27.47451910466839 24.085144425603914 32 23.297462438999162 26.405854602815737 26.54712164703188 23.749561311153226 33 23.09649676940298 25.362532462974663 26.53766443905088 25.003306328571483 34 21.933703494364465 23.95680715792429 28.485258207637433 25.62423114007381 35 22.67653762749683 24.225524856571838 27.924179790389854 25.173757725541478 36 23.31460362846472 26.037466798180965 26.64716117520586 24.000768398148455 37 21.295341955647174 26.595885375683892 27.93903056229751 24.169742106371427 38 20.86104923289483 26.74712681894249 28.483558865578352 23.90826508258433 39 21.691288655414066 26.080689194031613 28.969570694476772 23.25845145607755 40 22.49818059573022 25.213064246212497 29.912040577332995 22.37671458072429 41 21.080707665140952 24.99118928084583 28.688440410354165 25.239662643659056 42 22.491826534117987 24.84814901013325 27.398639787508362 25.261384668240407 43 22.547609284318398 23.541502735571292 28.463092876431972 25.447795103678338 44 21.767020203699396 23.98214951993587 28.541040957837843 25.709789318526894 45 22.149889358055066 23.781183850339684 28.044759192147563 26.024167599457687 46 21.934590107612685 24.967915683080093 28.812935687291507 24.284558522015715 47 20.17192908571703 25.401617330333625 29.79308663319702 24.63336695075233 48 20.427273701203948 24.140853291366973 30.20388410487157 25.227988902557506 49 21.321423162032264 23.47596723964048 30.284048719397987 24.918560878929267 50 21.06364036011275 23.356348335568338 29.469842219784038 26.110169084534878 51 20.01499854078236 23.90730458489876 28.351896798217908 27.72580007610097 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 298.0 1 1013.0 2 1728.0 3 4271.0 4 6814.0 5 4726.5 6 2639.0 7 2622.5 8 2606.0 9 2660.0 10 2714.0 11 2819.0 12 2924.0 13 3036.5 14 3149.0 15 3117.5 16 3086.0 17 3047.0 18 3008.0 19 3165.0 20 3322.0 21 3935.5 22 4549.0 23 4912.5 24 5276.0 25 6084.0 26 9102.5 27 11313.0 28 12903.0 29 14493.0 30 17772.0 31 21051.0 32 24478.0 33 27905.0 34 31622.0 35 35339.0 36 37871.5 37 40404.0 38 44480.5 39 48557.0 40 55479.0 41 62401.0 42 68262.5 43 74124.0 44 83296.5 45 92469.0 46 103258.5 47 114048.0 48 125579.0 49 137110.0 50 132320.0 51 127530.0 52 113862.0 53 100194.0 54 89769.0 55 79344.0 56 73964.0 57 68584.0 58 64512.0 59 60440.0 60 56719.5 61 52999.0 62 47347.5 63 41696.0 64 36194.0 65 30692.0 66 26392.5 67 22093.0 68 18807.5 69 15522.0 70 12913.5 71 10305.0 72 8285.0 73 6265.0 74 5184.0 75 3348.0 76 2593.0 77 1985.0 78 1377.0 79 1123.5 80 870.0 81 629.5 82 389.0 83 261.5 84 134.0 85 102.5 86 71.0 87 51.0 88 31.0 89 21.0 90 11.0 91 6.5 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1353465.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.953549823700794 #Duplication Level Percentage of deduplicated Percentage of total 1 75.71250557727579 24.192833192407065 2 10.092691064873401 6.449946135933041 3 3.623262419240113 3.4732828871259493 4 1.7755574895920427 2.269414588340978 5 1.014594061018401 1.6209940939791203 6 0.6800167964834988 1.3037370352433328 7 0.49420817252374377 1.1054193824812295 8 0.38066231700269404 0.9730809849880777 9 0.3315787786684069 0.953560712219652 >10 5.379043251112535 43.41033983431303 >50 0.4459088466612596 8.66715907604101 >100 0.06559802402977397 3.629765460974229 >500 0.002992190512562237 0.6800156233448079 >1k 0.0013810110057979556 1.2704509926085021 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGCT 3717 0.27462845363566846 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3672 0.27130365395484923 No Hit GCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC 3183 0.2351741640899469 No Hit TCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC 3143 0.2322187865958854 No Hit CCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC 2348 0.17348065890141232 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.2165331205461537E-4 0.0 0.0 0.29398617622177153 0.0 2 2.2165331205461537E-4 0.0 0.0 1.0071926499761723 0.0 3 2.2165331205461537E-4 0.0 0.0 1.4689703834232877 0.0 4 2.2165331205461537E-4 0.0 0.0 1.993328235307156 0.0 5 2.2165331205461537E-4 0.0 0.0 2.8637607917456305 0.0 6 2.2165331205461537E-4 0.0 0.0 3.566032368772004 0.0 7 2.2165331205461537E-4 0.0 0.0 4.185479491527302 0.0 8 2.2165331205461537E-4 0.0 0.0 5.235894537354125 0.0 9 2.2165331205461537E-4 0.0 0.0 5.848174869686324 0.0 10 2.2165331205461537E-4 0.0 0.0 6.850417262359943 0.0 11 2.2165331205461537E-4 0.0 0.0 8.450532522082211 0.0 12 2.2165331205461537E-4 0.0 0.0 9.896820383238577 0.0 13 2.2165331205461537E-4 0.0 0.0 10.360888534243589 0.0 14 2.2165331205461537E-4 0.0 0.0 10.52808901597012 0.0 15 2.2165331205461537E-4 0.0 0.0 10.768213437362622 0.0 16 2.2165331205461537E-4 0.0 0.0 11.409604238011326 0.0 17 2.2165331205461537E-4 0.0 0.0 12.29008507792961 0.0 18 2.2165331205461537E-4 0.0 0.0 13.236175298216061 0.0 19 2.2165331205461537E-4 0.0 0.0 13.839146191441966 1.4776887470307692E-4 20 2.2165331205461537E-4 0.0 0.0 14.504623318667273 1.4776887470307692E-4 21 2.2165331205461537E-4 0.0 0.0 15.39337921556893 1.4776887470307692E-4 22 2.9553774940615385E-4 0.0 0.0 16.31989005995722 1.4776887470307692E-4 23 2.9553774940615385E-4 0.0 0.0 17.22283176883037 1.4776887470307692E-4 24 2.9553774940615385E-4 0.0 0.0 17.92584219023026 1.4776887470307692E-4 25 2.9553774940615385E-4 0.0 0.0 18.535979873879267 1.4776887470307692E-4 26 2.9553774940615385E-4 0.0 0.0 19.072011466864677 1.4776887470307692E-4 27 2.9553774940615385E-4 0.0 0.0 19.603536109171646 1.4776887470307692E-4 28 2.9553774940615385E-4 0.0 0.0 20.147768874703075 1.4776887470307692E-4 29 2.9553774940615385E-4 0.0 0.0 20.768619801768054 1.4776887470307692E-4 30 2.9553774940615385E-4 0.0 0.0 21.44207644822733 1.4776887470307692E-4 31 2.9553774940615385E-4 0.0 0.0 22.0794036048217 1.4776887470307692E-4 32 2.9553774940615385E-4 0.0 0.0 22.684517146730798 1.4776887470307692E-4 33 2.9553774940615385E-4 0.0 0.0 23.298940127746192 1.4776887470307692E-4 34 2.9553774940615385E-4 0.0 0.0 23.904644745154105 1.4776887470307692E-4 35 2.9553774940615385E-4 0.0 0.0 24.54758711898719 1.4776887470307692E-4 36 2.9553774940615385E-4 0.0 0.0 25.145459986035842 1.4776887470307692E-4 37 2.9553774940615385E-4 0.0 0.0 25.739712515654265 1.4776887470307692E-4 38 2.9553774940615385E-4 0.0 0.0 26.325320566102558 1.4776887470307692E-4 39 3.694221867576923E-4 0.0 0.0 26.91321903410875 1.4776887470307692E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCTA 30 2.1657888E-6 45.000004 31 GATCGAC 25 3.8911745E-5 45.0 9 TCGTTCA 235 0.0 42.12766 16 CTTCGAC 70 0.0 41.785717 21 TATCGCG 70 0.0 41.785717 32 CGTCTTA 40 3.4588265E-7 39.375004 42 TTTACGG 200 0.0 39.375 2 CGTTTGG 915 0.0 39.098362 2 GCGATAG 110 0.0 38.863636 9 TTCGGTA 70 0.0 38.57143 25 ACGTACC 35 6.249111E-6 38.57143 35 CGTTCAT 260 0.0 38.076927 17 TGCGACG 65 9.094947E-12 38.076927 1 GCGATCT 650 0.0 38.076923 9 CGTTTTT 2145 0.0 37.76224 1 TCGTTTG 555 0.0 37.7027 1 GTATGCG 30 1.140029E-4 37.500004 1 TTTGGGC 4025 0.0 37.118015 4 GGCGATA 225 0.0 37.0 8 TTGGGAC 2880 0.0 36.953125 5 >>END_MODULE