##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933191.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 351318 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.130508542118534 33.0 31.0 34.0 30.0 34.0 2 32.3366266459447 34.0 31.0 34.0 30.0 34.0 3 32.38097393244866 34.0 31.0 34.0 30.0 34.0 4 35.893301794955 37.0 35.0 37.0 35.0 37.0 5 35.11281517030155 37.0 35.0 37.0 35.0 37.0 6 34.8250530858083 37.0 35.0 37.0 32.0 37.0 7 35.56923072543963 37.0 35.0 37.0 33.0 37.0 8 35.838306036126816 37.0 35.0 37.0 35.0 37.0 9 37.67477328232541 39.0 37.0 39.0 35.0 39.0 10 37.27653009524135 39.0 37.0 39.0 34.0 39.0 11 37.21510426451249 39.0 37.0 39.0 34.0 39.0 12 36.98731918091302 39.0 37.0 39.0 33.0 39.0 13 36.874970824153614 39.0 37.0 39.0 33.0 39.0 14 37.747357095281195 40.0 37.0 41.0 33.0 41.0 15 37.889780768420636 40.0 37.0 41.0 33.0 41.0 16 37.970340261529444 40.0 37.0 41.0 33.0 41.0 17 37.97619535577454 40.0 37.0 41.0 33.0 41.0 18 37.91330361666638 40.0 37.0 41.0 33.0 41.0 19 37.86145884924769 40.0 37.0 41.0 33.0 41.0 20 37.682321998872816 39.0 35.0 41.0 33.0 41.0 21 37.572404488241425 39.0 35.0 41.0 33.0 41.0 22 37.652642335433995 39.0 35.0 41.0 33.0 41.0 23 37.60399694863343 39.0 35.0 41.0 33.0 41.0 24 37.54120483436659 39.0 35.0 41.0 33.0 41.0 25 37.40231926630574 39.0 35.0 41.0 33.0 41.0 26 37.316027075185445 39.0 35.0 41.0 33.0 41.0 27 37.27279843332821 39.0 35.0 41.0 33.0 41.0 28 37.18236469523338 39.0 35.0 41.0 32.0 41.0 29 37.07316448345943 39.0 35.0 41.0 32.0 41.0 30 36.935366249380905 39.0 35.0 41.0 32.0 41.0 31 36.77502149050148 39.0 35.0 41.0 31.0 41.0 32 36.658952857525094 39.0 35.0 41.0 31.0 41.0 33 36.41079591708936 39.0 35.0 41.0 30.0 41.0 34 36.15524681342829 39.0 35.0 41.0 30.0 41.0 35 35.98360175112007 39.0 35.0 41.0 29.0 41.0 36 35.81703470929471 38.0 35.0 40.0 29.0 41.0 37 35.78310248834389 38.0 35.0 40.0 29.0 41.0 38 35.661864749315434 38.0 35.0 40.0 28.0 41.0 39 35.570195663188336 38.0 35.0 40.0 27.0 41.0 40 35.41700112149107 38.0 35.0 40.0 26.0 41.0 41 35.254615476576774 38.0 34.0 40.0 25.0 41.0 42 35.187576497646006 38.0 34.0 40.0 26.0 41.0 43 35.07799771147507 38.0 34.0 40.0 25.0 41.0 44 35.00315099140949 38.0 34.0 40.0 25.0 41.0 45 35.01588304612915 38.0 34.0 40.0 25.0 41.0 46 34.837685515686644 37.0 34.0 40.0 24.0 41.0 47 34.73946396142526 37.0 34.0 40.0 24.0 41.0 48 34.61982591270587 37.0 34.0 40.0 24.0 41.0 49 34.64734514030024 37.0 34.0 40.0 24.0 41.0 50 34.46230765289567 37.0 34.0 40.0 24.0 41.0 51 33.357832505023936 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 9.0 10 14.0 11 8.0 12 7.0 13 10.0 14 11.0 15 22.0 16 31.0 17 58.0 18 140.0 19 271.0 20 422.0 21 712.0 22 1014.0 23 1459.0 24 2256.0 25 3377.0 26 4629.0 27 5414.0 28 5592.0 29 5982.0 30 7002.0 31 8460.0 32 11208.0 33 15721.0 34 25520.0 35 27071.0 36 30902.0 37 44552.0 38 68984.0 39 80438.0 40 20.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.69192583357528 4.2172618539329045 52.51880063076757 19.57201168172425 2 24.952607039775927 4.209007224224207 49.19246950056644 21.645916235433425 3 21.07890856716707 4.125606999925993 51.977980063646044 22.817504369260895 4 18.736586226723368 4.799640212001663 51.83138922571573 24.632384335559237 5 17.393928008243247 7.647202819098367 51.06057759636569 23.898291576292703 6 21.218098702599924 7.200883530021235 53.9926789973756 17.588338770003244 7 77.65300952413483 2.2310271605781655 14.626065274196026 5.489898041090977 8 79.54872793309765 2.736552069634918 12.422933069185182 5.29178692808225 9 73.2464604717094 5.323097592494549 15.143545164210204 6.286896771585856 10 37.5952840446547 24.524220222134932 22.100205511815506 15.78029022139486 11 30.371344479929864 22.576412253286197 28.275237818728332 18.777005448055608 12 27.028219447907592 19.519922121838334 34.159934873818024 19.29192355643605 13 26.108539841397256 19.67761401351482 35.02923277486494 19.184613370222987 14 20.873396751660888 21.711383988295506 36.94715329132012 20.468065968723494 15 19.18176694618551 21.660717640428327 38.265332263077894 20.89218315030827 16 22.98402017545358 21.399415913787507 33.63647749332513 21.980086417433778 17 22.693400281226694 21.089155693702004 31.918375944301175 24.299068080770127 18 23.786142469215925 20.54634262975424 33.342726532657025 22.324788368372815 19 23.83794738669809 23.302250382844033 31.094905470257718 21.764896760200163 20 24.56520872827467 25.753590763923285 30.153308398658762 19.527892109143284 21 24.125720856887494 24.143653328323627 31.920083798723663 19.810542016065217 22 21.513842160094274 22.499558804274187 32.60948770060173 23.377111335029802 23 21.48936291337193 23.6034020460096 31.852054264227853 23.05518077639062 24 22.361507238456326 24.223637843776864 30.259480015256834 23.155374902509976 25 23.32160606629891 24.11518908794881 28.184721534336415 24.37848331141587 26 21.322847107179253 24.769297331762107 28.798979841624966 25.108875719433676 27 22.03388383174218 22.488457750528013 31.27195304538908 24.205705372340727 28 20.275078418982233 24.177241131965914 29.87378955817806 25.673890890873796 29 22.28009951098435 25.38668670549189 28.993105960981218 23.34010782254254 30 25.14957958316966 23.732629697311268 29.170438178516328 21.947352541002736 31 24.771574470992093 24.811424407516835 28.17219726857149 22.244803852919578 32 26.014323205756607 25.028891203980443 26.60495619353406 22.35182939672889 33 25.95511758577699 25.136201390193502 26.653914686978748 22.254766337050764 34 22.824335786950854 25.11769963394987 29.244445203490855 22.813519375608422 35 23.741453611827463 26.881059325169787 26.84547902470127 22.53200803830148 36 25.451869815950225 27.892109143283296 25.023198355905475 21.632822684861008 37 24.293090590291417 27.574732863104085 26.40627579571784 21.725900750886662 38 23.722382570776336 26.43360146647766 27.711645859306955 22.13237010343905 39 23.92647117426377 25.581382109655635 27.19046561804405 23.301681098036536 40 26.570514462680535 24.2486863753067 27.801877501295124 21.37892166071764 41 23.242475478056917 25.114853209912386 26.82242298999767 24.82024832203303 42 22.777654432736153 25.807957463039184 27.777967539380278 23.636420564844386 43 22.274691305313134 24.373075105744654 29.52168690474157 23.830546684200637 44 23.079375380709216 23.68822548232655 28.394502985898818 24.837896151065415 45 22.783347280811117 22.923960628262712 27.263334073403584 27.029358017522586 46 23.02301618476708 23.840793810735573 28.49441246961442 24.641777534882927 47 21.107657449945634 25.467525148156373 30.202266892103452 23.222550509794544 48 21.26079506316215 25.947716883279536 29.00619951155364 23.78528854200468 49 22.96694163122869 24.164432223797245 29.41978492419973 23.44884122077434 50 22.028760268474716 23.068558969366784 28.34753698928037 26.555143772878132 51 20.67557028105591 23.977706806938443 27.782806460243997 27.56391645176165 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 49.0 1 173.0 2 297.0 3 2927.0 4 5557.0 5 3614.0 6 1671.0 7 1722.5 8 1774.0 9 1805.5 10 1837.0 11 1854.0 12 1871.0 13 1806.0 14 1741.0 15 1714.0 16 1687.0 17 1622.0 18 1557.0 19 1532.0 20 1507.0 21 1489.0 22 1471.0 23 1596.0 24 1721.0 25 1882.0 26 2302.0 27 2561.0 28 3001.0 29 3441.0 30 3832.5 31 4224.0 32 4985.5 33 5747.0 34 6540.0 35 7333.0 36 8040.5 37 8748.0 38 9176.5 39 9605.0 40 10554.5 41 11504.0 42 13221.0 43 14938.0 44 17339.0 45 19740.0 46 23720.5 47 27701.0 48 31855.5 49 36010.0 50 35294.0 51 34578.0 52 30399.5 53 26221.0 54 24761.0 55 23301.0 56 22231.0 57 21161.0 58 19729.5 59 18298.0 60 16273.5 61 14249.0 62 12562.5 63 10876.0 64 9702.5 65 8529.0 66 7272.0 67 6015.0 68 5031.5 69 4048.0 70 3483.5 71 2919.0 72 2397.5 73 1876.0 74 1610.0 75 1047.5 76 751.0 77 583.0 78 415.0 79 320.5 80 226.0 81 167.0 82 108.0 83 78.0 84 48.0 85 28.5 86 9.0 87 8.5 88 8.0 89 5.5 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 351318.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.32520632148764 #Duplication Level Percentage of deduplicated Percentage of total 1 72.69375284550127 38.03715615924084 2 10.494532626300666 10.982571698375319 3 5.942537712726606 9.328335356749228 4 3.989271473368254 8.349578116656756 5 2.5719968775134365 6.7290133637056275 6 1.5600753582850542 4.897875899960053 7 0.9514003793254524 3.4847554799782134 8 0.5602205687564019 2.3450925476575906 9 0.3007947606725474 1.4165233121352185 >10 0.8619827254926592 7.450577198911441 >50 0.04460476376835265 1.5714337916903112 >100 0.023934263485457234 2.2442954985470003 >500 0.0027198026688019586 0.9654597756590267 >1k 0.002175842135041567 2.197331800733398 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3493 0.9942559162923619 No Hit CTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTGCT 1570 0.44688857388462877 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTGC 1335 0.3799976090038085 No Hit CCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTGC 1322 0.37629725775508227 No Hit GCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTGC 860 0.24479246722342718 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCC 757 0.21547429963736559 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 710 0.20209610666120154 No Hit CGCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTG 564 0.16053831571396854 No Hit TCCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTG 501 0.14260584427783377 No Hit TTCCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCT 393 0.11186446467303128 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.47819923829692756 0.0 2 0.0 0.0 0.0 1.5837503344548245 0.0 3 0.0 0.0 0.0 2.362531951109821 0.0 4 0.0 0.0 0.0 3.2668408678177605 0.0 5 0.0 0.0 0.0 4.644225459555161 0.0 6 0.0 0.0 0.0 5.798735049157743 0.0 7 0.0 0.0 0.0 6.797829886313824 0.0 8 2.8464240374817117E-4 0.0 0.0 8.134795256718984 0.0 9 2.8464240374817117E-4 0.0 0.0 9.081231249181654 0.0 10 2.8464240374817117E-4 0.0 0.0 10.404249141803152 0.0 11 2.8464240374817117E-4 0.0 0.0 12.28943578182729 0.0 12 2.8464240374817117E-4 0.0 0.0 13.761321651609084 0.0 13 2.8464240374817117E-4 0.0 0.0 14.368179256400184 0.0 14 2.8464240374817117E-4 0.0 0.0 14.668761634758253 0.0 15 2.8464240374817117E-4 0.0 0.0 14.984145418111227 0.0 16 2.8464240374817117E-4 0.0 0.0 15.579901969156149 0.0 17 2.8464240374817117E-4 0.0 0.0 16.413050284927046 0.0 18 2.8464240374817117E-4 0.0 0.0 17.362617343830944 0.0 19 2.8464240374817117E-4 0.0 0.0 17.934179290557275 0.0 20 2.8464240374817117E-4 0.0 0.0 18.51541907901104 0.0 21 2.8464240374817117E-4 0.0 0.0 19.13650880398955 0.0 22 2.8464240374817117E-4 0.0 0.0 19.7507671112781 0.0 23 2.8464240374817117E-4 0.0 0.0 20.34083081424806 0.0 24 2.8464240374817117E-4 0.0 0.0 20.804228647550083 0.0 25 2.8464240374817117E-4 0.0 0.0 21.197319807126306 0.0 26 2.8464240374817117E-4 0.0 0.0 21.576463488918872 0.0 27 2.8464240374817117E-4 0.0 0.0 22.02961419568596 0.0 28 2.8464240374817117E-4 0.0 0.0 22.441491753909563 0.0 29 2.8464240374817117E-4 0.0 0.0 22.895496387887896 0.0 30 2.8464240374817117E-4 0.0 0.0 23.444856227121868 0.0 31 5.692848074963423E-4 0.0 0.0 23.868688766302892 0.0 32 5.692848074963423E-4 0.0 0.0 24.279143112507757 0.0 33 5.692848074963423E-4 0.0 0.0 24.68959745871262 0.0 34 5.692848074963423E-4 0.0 0.0 25.13904781423098 0.0 35 5.692848074963423E-4 0.0 0.0 25.641157014442754 0.0 36 5.692848074963423E-4 0.0 0.0 26.076944534581205 0.0 37 5.692848074963423E-4 0.0 0.0 26.49337637126478 0.0 38 5.692848074963423E-4 0.0 0.0 26.973283463984195 0.0 39 5.692848074963423E-4 0.0 0.0 27.72587797949436 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTATG 20 7.0265913E-4 45.000004 1 TACCGGG 25 3.885258E-5 45.0 3 CGTTTTT 2080 0.0 43.70192 1 CGGGTAT 50 1.0768417E-9 40.5 6 CGTATGG 50 1.0768417E-9 40.5 2 TATGGGA 140 0.0 40.17857 4 GCGGGAT 90 0.0 40.000004 5 TAGGGCG 45 1.9217623E-8 40.000004 5 TTGGGAC 570 0.0 39.86842 5 GCAACGA 40 3.449095E-7 39.375004 9 CGCGCAA 40 3.449095E-7 39.375004 16 AACGACG 40 3.449095E-7 39.375004 11 TTACACG 160 0.0 39.375004 34 ACGCGCA 40 3.449095E-7 39.375004 15 TTTTGCG 315 0.0 39.285713 1 ACACGCG 155 0.0 39.193546 36 CGGGATT 100 0.0 38.25 6 CGGGATA 65 9.094947E-12 38.07692 6 GTTTTTT 2435 0.0 37.607803 2 TTTGGGA 1650 0.0 37.5 4 >>END_MODULE