##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933190.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1755883 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.25910325460182 33.0 31.0 34.0 30.0 34.0 2 32.439329955355795 34.0 31.0 34.0 31.0 34.0 3 32.50444534174544 34.0 31.0 34.0 30.0 34.0 4 35.982951597572274 37.0 35.0 37.0 35.0 37.0 5 35.18483008264218 37.0 35.0 37.0 35.0 37.0 6 34.905071123759384 37.0 35.0 37.0 32.0 37.0 7 35.71731203047128 37.0 35.0 37.0 35.0 37.0 8 36.01310565681199 37.0 35.0 37.0 35.0 37.0 9 37.88626804861144 39.0 38.0 39.0 35.0 39.0 10 37.352266637355676 39.0 37.0 39.0 34.0 39.0 11 37.18702726776215 39.0 37.0 39.0 34.0 39.0 12 37.13401405446718 39.0 37.0 39.0 34.0 39.0 13 37.15889498332178 39.0 37.0 39.0 33.0 39.0 14 38.35418077400374 40.0 38.0 41.0 34.0 41.0 15 38.44230965275021 40.0 38.0 41.0 34.0 41.0 16 38.41187368406665 40.0 38.0 41.0 34.0 41.0 17 38.36768224306517 40.0 38.0 41.0 34.0 41.0 18 38.31535358563185 40.0 38.0 41.0 34.0 41.0 19 38.326686914788745 40.0 37.0 41.0 34.0 41.0 20 38.242422188722145 40.0 37.0 41.0 34.0 41.0 21 38.13675056937165 40.0 37.0 41.0 34.0 41.0 22 38.18196314902531 40.0 37.0 41.0 34.0 41.0 23 38.10257574109437 40.0 37.0 41.0 34.0 41.0 24 38.07445313839248 40.0 37.0 41.0 34.0 41.0 25 37.97840801465701 40.0 37.0 41.0 33.0 41.0 26 37.953581189635074 40.0 37.0 41.0 33.0 41.0 27 37.91697510597232 40.0 37.0 41.0 33.0 41.0 28 37.83889188516547 40.0 36.0 41.0 33.0 41.0 29 37.80387132855663 40.0 36.0 41.0 33.0 41.0 30 37.72665604712842 40.0 36.0 41.0 33.0 41.0 31 37.66092330753245 40.0 36.0 41.0 33.0 41.0 32 37.62531956855895 40.0 36.0 41.0 33.0 41.0 33 37.50102484049336 40.0 36.0 41.0 33.0 41.0 34 37.40975053577032 40.0 36.0 41.0 33.0 41.0 35 37.29946243570898 40.0 36.0 41.0 32.0 41.0 36 37.17401444173672 40.0 36.0 41.0 32.0 41.0 37 37.146107115337415 40.0 36.0 41.0 32.0 41.0 38 37.0772232546246 39.0 35.0 41.0 31.0 41.0 39 37.03385191382341 39.0 35.0 41.0 31.0 41.0 40 36.979022520293206 39.0 35.0 41.0 31.0 41.0 41 36.88280938991949 39.0 35.0 41.0 31.0 41.0 42 36.79965692474954 39.0 35.0 41.0 31.0 41.0 43 36.66932477847328 39.0 35.0 41.0 31.0 41.0 44 36.62115300393022 39.0 35.0 41.0 31.0 41.0 45 36.63574850943941 39.0 35.0 41.0 31.0 41.0 46 36.459318758710005 39.0 35.0 41.0 30.0 41.0 47 36.3913774437135 39.0 35.0 40.0 30.0 41.0 48 36.296605183830586 39.0 35.0 40.0 30.0 41.0 49 36.34572007360399 39.0 35.0 40.0 30.0 41.0 50 36.16983022217312 39.0 35.0 40.0 30.0 41.0 51 35.17825390416104 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 22.0 10 27.0 11 28.0 12 25.0 13 22.0 14 18.0 15 41.0 16 55.0 17 127.0 18 247.0 19 473.0 20 891.0 21 1546.0 22 2557.0 23 3886.0 24 5875.0 25 9127.0 26 12816.0 27 15290.0 28 17297.0 29 20157.0 30 24763.0 31 32463.0 32 42838.0 33 59853.0 34 99152.0 35 127201.0 36 141579.0 37 214915.0 38 378484.0 39 543874.0 40 227.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.405612446842984 4.2539850320323165 55.35471326961991 15.985689251504798 2 20.12577147794016 4.144638338659239 54.32246909389748 21.407121089503118 3 20.280793196357617 4.528262987909787 54.0713134075562 21.1196304081764 4 17.72265008545558 4.587948058042592 53.08753487561528 24.601866980886538 5 16.855451075043153 7.624312098243448 52.06856037674492 23.451676449968478 6 20.91887671331176 7.361424422925674 54.64601001319564 17.073688850566924 7 85.0284443781277 1.6257916956881522 9.292247832002474 4.053516094181673 8 88.27068773944505 1.9218820388374396 6.389605685572445 3.417824536145062 9 82.50367478926557 5.1489763270103985 8.156409054589627 4.190939829134401 10 39.09941607726711 32.539981308549606 15.012560631887203 13.348041982296088 11 25.2021347663825 26.296740728169244 29.31624715314175 19.184877352306504 12 22.280527802820576 23.928872254016927 33.589538710722756 20.201061232439745 13 21.804471026828097 24.792369423247447 34.486751110409976 18.91640843951448 14 20.410300686321357 26.55324984637359 33.04206487562099 19.99438459168407 15 19.067272705527646 24.9476189472761 35.69207059923696 20.29303774795929 16 20.943935330543095 25.39554173028613 32.046953014523176 21.6135699246476 17 21.308822968272942 23.72105658520528 31.578812483519688 23.39130796300209 18 22.326658439087343 23.035646452525597 33.05601796930661 21.58167713908045 19 22.872822391924746 25.25037260455281 30.95627669952952 20.92052830399292 20 24.543605695823697 26.372770850905212 29.57566079288882 19.50796266038227 21 24.0159509488958 26.345889788784334 30.0516036660757 19.586555596244168 22 22.940252852838146 24.419679443334207 29.67407281692459 22.965994886903058 23 20.66977127747122 26.10919975875386 29.49291040462263 23.72811855915229 24 20.548009178288076 25.303280457752596 31.523797428416355 22.62491293554297 25 20.298448131225143 27.128345111832626 29.66433412704605 22.90887262989618 26 20.417419611671164 27.314234490566854 29.42980825032192 22.838537647440063 27 20.009932324648055 26.268321978172803 30.998933300225584 22.722812396953557 28 19.437058163898165 25.63957849127761 32.17885246340445 22.744510881419775 29 20.629905295512284 24.375656008970985 31.299693658404347 23.694745037112384 30 21.662718985262686 25.460067669656805 31.321164337259372 21.556049007821137 31 22.83267165295182 27.907326399310207 28.380307799551563 20.879694148186413 32 22.682832512189023 27.385651549676144 28.050559177348376 21.880956760786454 33 21.85082946870606 27.649792155855486 27.836592757034495 22.662785618403962 34 21.32869900784961 26.482744009709076 28.717517055521352 23.47103992691996 35 20.8052586647288 26.793812571794362 29.319037771878875 23.08189099159796 36 21.373861470268803 28.46943674493118 28.52428094582612 21.632420838973896 37 21.640337083962883 29.147044535427476 28.213667994963217 20.998950385646424 38 22.59279234436463 28.102954467922974 27.748887596724835 21.555365590987556 39 21.54551299830342 27.378931284145924 27.805098631286935 23.270457086263722 40 21.834028804880507 26.847631647438924 28.67303800993574 22.645301537744828 41 20.675352514945473 27.666706722486634 27.97293441533405 23.68500634723384 42 21.748487797877196 27.633162346238333 27.941611143794887 22.676738712089588 43 21.515271803417427 26.65747091349481 29.252632436215855 22.574624846871917 44 21.855556435138332 25.715096051388393 28.78830764919986 23.641039864273417 45 22.06041063100446 25.53404754189203 27.781862458945156 24.623679368158356 46 22.373244686576495 25.96129696568621 28.835748167730994 22.8297101800063 47 20.61031401294961 26.932375334803062 29.75158367613332 22.70572697611401 48 21.112283677215395 26.476707161012435 29.31972118871246 23.091287973059707 49 22.243908050821155 24.986061144165074 30.15075605834785 22.619274746665923 50 21.784310230237438 25.576874996796484 28.7942305950909 23.844584177875177 51 20.831627164224496 24.72009809309618 28.138435191866428 26.309839550812896 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 228.0 1 729.0 2 1230.0 3 5728.0 4 10226.0 5 6912.5 6 3599.0 7 3571.0 8 3543.0 9 3728.5 10 3914.0 11 4003.5 12 4093.0 13 4164.5 14 4236.0 15 4189.5 16 4143.0 17 4555.0 18 4967.0 19 5079.5 20 5192.0 21 6017.5 22 6843.0 23 7705.5 24 8568.0 25 10981.5 26 16366.0 27 19337.0 28 22916.0 29 26495.0 30 30839.5 31 35184.0 32 40315.5 33 45447.0 34 52262.5 35 59078.0 36 65743.0 37 72408.0 38 75783.0 39 79158.0 40 86398.5 41 93639.0 42 103019.0 43 112399.0 44 122584.5 45 132770.0 46 147739.5 47 162709.0 48 173664.5 49 184620.0 50 176431.5 51 168243.0 52 147035.5 53 125828.0 54 110877.5 55 95927.0 56 84525.0 57 73123.0 58 65171.0 59 57219.0 60 50982.5 61 44746.0 62 38170.0 63 31594.0 64 26879.5 65 22165.0 66 18084.5 67 14004.0 68 11722.5 69 9441.0 70 7786.5 71 6132.0 72 5005.5 73 3879.0 74 3264.5 75 2331.0 76 2012.0 77 1392.5 78 773.0 79 597.0 80 421.0 81 279.5 82 138.0 83 104.0 84 70.0 85 57.0 86 44.0 87 28.0 88 12.0 89 24.0 90 36.0 91 20.5 92 5.0 93 2.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1755883.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.55114983709088 #Duplication Level Percentage of deduplicated Percentage of total 1 75.66079973879104 23.871852293527223 2 10.49360325764113 6.621704974256406 3 3.571654233406064 3.3806939365342394 4 1.6866673076777656 2.1286517179945537 5 0.97875609888086 1.5440440164878273 6 0.6530760893694937 1.2363180930430948 7 0.4651943379265928 1.0274191381501752 8 0.4015339373068778 1.0135085936517083 9 0.3272660376333516 0.929305781096481 >10 5.0704078721713515 40.952510988930456 >50 0.6210623158733137 11.95034187967746 >100 0.06637162930546715 3.526906877883329 >500 0.002164286410162228 0.457685070588677 >1k 0.0012625004059279665 1.024342777031801 >5k 1.8035720084685235E-4 0.33471386114666146 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5882 0.3349881512606478 No Hit CTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTCTGCT 4118 0.23452587672413255 Illumina Single End Adapter 1 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTCTGC 3495 0.19904515278068072 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTCTGC 3291 0.1874270666097912 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTCTGC 3189 0.18161802352434644 Illumina Single End Adapter 1 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.695140279847803E-5 0.0 0.0 0.24876372742375205 0.0 2 5.695140279847803E-5 0.0 0.0 0.8734636647202576 0.0 3 5.695140279847803E-5 0.0 0.0 1.305041395127124 0.0 4 5.695140279847803E-5 0.0 0.0 1.7987531059871302 0.0 5 5.695140279847803E-5 0.0 0.0 2.61674610438167 0.0 6 5.695140279847803E-5 0.0 0.0 3.3146855456770186 0.0 7 5.695140279847803E-5 0.0 0.0 3.9216166453003987 0.0 8 5.695140279847803E-5 0.0 0.0 4.927663175735513 0.0 9 5.695140279847803E-5 0.0 0.0 5.493646216746788 0.0 10 5.695140279847803E-5 0.0 0.0 6.3800378499023 0.0 11 5.695140279847803E-5 0.0 0.0 7.937146153815488 0.0 12 5.695140279847803E-5 0.0 0.0 9.386559355036754 0.0 13 5.695140279847803E-5 0.0 0.0 9.870987987240607 0.0 14 5.695140279847803E-5 0.0 0.0 10.048106849943874 0.0 15 5.695140279847803E-5 0.0 0.0 10.256435081380706 0.0 16 5.695140279847803E-5 0.0 0.0 10.741319324806948 0.0 17 5.695140279847803E-5 0.0 0.0 11.520585369298525 0.0 18 5.695140279847803E-5 0.0 0.0 12.365744186827937 0.0 19 5.695140279847803E-5 0.0 0.0 12.997221341057463 0.0 20 5.695140279847803E-5 0.0 0.0 13.607113913626364 0.0 21 5.695140279847803E-5 0.0 0.0 14.440711596387686 0.0 22 5.695140279847803E-5 0.0 0.0 15.358369549679564 0.0 23 5.695140279847803E-5 0.0 0.0 16.295220125714525 0.0 24 5.695140279847803E-5 0.0 0.0 16.99196358755111 0.0 25 5.695140279847803E-5 0.0 0.0 17.595591505812177 0.0 26 5.695140279847803E-5 0.0 0.0 18.121252953642127 0.0 27 5.695140279847803E-5 0.0 0.0 18.64315560888738 0.0 28 5.695140279847803E-5 0.0 0.0 19.201165453506867 0.0 29 5.695140279847803E-5 0.0 0.0 19.789929055637533 0.0 30 5.695140279847803E-5 0.0 0.0 20.498233652242206 0.0 31 1.1390280559695605E-4 0.0 0.0 21.120883339037967 0.0 32 1.1390280559695605E-4 0.0 0.0 21.67148950129365 0.0 33 1.1390280559695605E-4 0.0 0.0 22.279274871959007 0.0 34 1.1390280559695605E-4 0.0 0.0 22.868038474089676 0.0 35 1.1390280559695605E-4 0.0 0.0 23.521669724007808 0.0 36 1.1390280559695605E-4 0.0 0.0 24.103314400788662 0.0 37 1.708542083954341E-4 0.0 0.0 24.66508303799285 0.0 38 2.8475701399239016E-4 0.0 0.0 25.24735418020449 0.0 39 2.8475701399239016E-4 0.0 0.0 25.871370700667413 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGCGC 20 7.0343056E-4 45.0 38 CGTAGCG 50 1.0822987E-9 40.5 2 CGTTTTT 3880 0.0 40.12887 1 TACGCGG 65 9.094947E-12 38.07692 2 CGCTATA 30 1.14016744E-4 37.499996 23 TTTGGGA 11670 0.0 37.133675 4 TTGGGAC 4945 0.0 36.94641 5 TGGGCGA 3240 0.0 36.875 6 TTGGGAT 7140 0.0 36.7437 5 TTTGGGC 4495 0.0 36.74082 4 CACGACC 185 0.0 36.486485 27 TACGAAT 185 0.0 36.486485 12 TTGGGCG 2475 0.0 36.363636 5 TTCACGG 180 0.0 36.250004 2 CGTTTGG 1220 0.0 36.14754 2 GCGATCT 630 0.0 36.071426 9 TACCGGG 125 0.0 36.000004 3 CTACGAA 175 0.0 36.0 11 GTATCGC 25 0.002107411 36.0 33 CGACTTA 25 0.002107411 36.0 23 >>END_MODULE