##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933189.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 833532 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.17901412303307 33.0 31.0 34.0 30.0 34.0 2 32.3718729454898 34.0 31.0 34.0 30.0 34.0 3 32.43391135553284 34.0 31.0 34.0 30.0 34.0 4 35.9233550721508 37.0 35.0 37.0 35.0 37.0 5 35.23326398986482 37.0 35.0 37.0 35.0 37.0 6 34.91521861188293 37.0 35.0 37.0 32.0 37.0 7 35.680550956651935 37.0 35.0 37.0 35.0 37.0 8 35.954812772635 37.0 35.0 37.0 35.0 37.0 9 37.82360245317516 39.0 38.0 39.0 35.0 39.0 10 37.25069223497118 39.0 37.0 39.0 34.0 39.0 11 37.14400286971586 39.0 37.0 39.0 34.0 39.0 12 37.00097176833043 39.0 37.0 39.0 33.0 39.0 13 36.95332152814769 39.0 37.0 39.0 33.0 39.0 14 38.094880580469614 40.0 37.0 41.0 33.0 41.0 15 38.174879908629784 40.0 37.0 41.0 33.0 41.0 16 38.16902530436744 40.0 37.0 41.0 33.0 41.0 17 38.12319623001876 40.0 37.0 41.0 33.0 41.0 18 38.08979859201566 40.0 37.0 41.0 33.0 41.0 19 38.10440391010783 40.0 37.0 41.0 34.0 41.0 20 38.02190677742426 40.0 37.0 41.0 34.0 41.0 21 37.89712452551312 40.0 36.0 41.0 33.0 41.0 22 37.940777318687225 40.0 36.0 41.0 33.0 41.0 23 37.86834338693655 40.0 36.0 41.0 33.0 41.0 24 37.806830451620336 40.0 36.0 41.0 33.0 41.0 25 37.71478599501879 40.0 36.0 41.0 33.0 41.0 26 37.67895413733366 40.0 36.0 41.0 33.0 41.0 27 37.61138504580508 39.0 36.0 41.0 33.0 41.0 28 37.55057754231391 39.0 36.0 41.0 33.0 41.0 29 37.494225776574865 39.0 36.0 41.0 33.0 41.0 30 37.40887692374138 39.0 36.0 41.0 32.0 41.0 31 37.344604646252336 39.0 35.0 41.0 32.0 41.0 32 37.31384397959526 39.0 35.0 41.0 32.0 41.0 33 37.198994159792306 39.0 35.0 41.0 32.0 41.0 34 37.09608389359977 39.0 35.0 41.0 31.0 41.0 35 36.99241660788068 39.0 35.0 41.0 31.0 41.0 36 36.87110512853736 39.0 35.0 41.0 31.0 41.0 37 36.82057917392493 39.0 35.0 41.0 31.0 41.0 38 36.72246896339912 39.0 35.0 41.0 31.0 41.0 39 36.70221179270862 39.0 35.0 41.0 31.0 41.0 40 36.62169178867758 39.0 35.0 41.0 31.0 41.0 41 36.52638770917013 39.0 35.0 41.0 30.0 41.0 42 36.424833119784246 39.0 35.0 40.0 30.0 41.0 43 36.258791504105425 39.0 35.0 40.0 30.0 41.0 44 36.175947654079266 39.0 35.0 40.0 30.0 41.0 45 36.17131195922892 38.0 35.0 40.0 30.0 41.0 46 35.91956157652016 38.0 35.0 40.0 29.0 41.0 47 35.84857330012525 38.0 35.0 40.0 29.0 41.0 48 35.777310289227046 38.0 35.0 40.0 29.0 41.0 49 35.819185106270666 38.0 35.0 40.0 29.0 41.0 50 35.60565041294156 38.0 34.0 40.0 28.0 41.0 51 34.45089090760763 37.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 13.0 10 12.0 11 16.0 12 8.0 13 13.0 14 10.0 15 19.0 16 32.0 17 76.0 18 143.0 19 307.0 20 539.0 21 879.0 22 1326.0 23 2035.0 24 3175.0 25 4657.0 26 6629.0 27 7916.0 28 9159.0 29 11135.0 30 13913.0 31 17954.0 32 23140.0 33 31941.0 34 52247.0 35 68644.0 36 71776.0 37 106931.0 38 178252.0 39 220548.0 40 85.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.518751529635335 4.107340809950908 56.516246526828006 16.85766113358575 2 19.962520935009092 4.3168108722880465 54.1286957189406 21.591972473762254 3 19.60488619513108 4.523761535249996 54.397191709496454 21.474160560122467 4 18.034700527394268 4.803654808693607 52.89215051131811 24.26949415259402 5 17.02166203577067 7.763229246147718 51.385669656353926 23.829439061727683 6 21.01467010264753 6.968178786177376 54.68464318106563 17.33250793010946 7 83.80290138830902 1.8559575397225303 9.949947932412913 4.39119313955553 8 87.0892779161448 2.1681231194483233 6.743352384791465 3.9992465796154195 9 81.24079219514067 4.9518194862344815 8.872004914028496 4.935383404596344 10 37.554646972161834 31.183445866505426 16.140352140049814 15.121555021282926 11 28.425303407667613 25.6704001765979 26.158443826991647 19.745852588742842 12 24.099014794872904 23.589136349894186 32.27962453751026 20.032224317722655 13 22.51455253067669 25.51047830197281 32.46246094930969 19.512508218040818 14 20.629441941041254 27.284855290498744 31.74383227038674 20.34187049807326 15 18.83071075855516 24.988242802915785 35.40224010595874 20.778806332570316 16 21.029546556101025 24.583219360504454 31.551998003675923 22.835236079718594 17 20.744614483907036 23.753737109073196 29.673245898177875 25.82840250884189 18 22.074617411209168 22.73482001890749 31.989533695167072 23.20102887471627 19 22.866308672012593 25.438375491282876 29.618298997518995 22.077016839185536 20 25.594338309746956 25.072222782088748 29.14609157176929 20.187347336395003 21 24.72106649774694 25.91682142977114 28.42722295004871 20.934889122433212 22 22.95568736413239 24.699951531554877 27.93534021489277 24.409020889419963 23 21.615726810728322 25.938416281558474 27.427621255092788 25.01823565262041 24 21.13056247390622 24.753818689624392 30.31449302486287 23.801125811606514 25 21.027027156725836 26.47408857728318 28.573468085208486 23.925416180782502 26 21.011430874879427 27.54567311153021 27.680281021004593 23.762614992585767 27 20.7443745411094 27.448856192683664 28.517561413359054 23.28920785284788 28 19.330991491628396 25.87711089676221 31.494291760844217 23.297605850765176 29 20.91485389883052 24.81932307337931 30.105022962525734 24.16080006526444 30 21.25473287168339 26.560467984432513 29.83460742958879 22.350191714295313 31 22.440650149004476 28.00816285397561 27.150007438226726 22.40117955879318 32 23.104691841464994 27.757662573242538 26.422380904392394 22.715264680900074 33 21.63792151950975 26.553749586098675 27.13165181420749 24.676677080184085 34 20.31187764836863 25.87951032473858 28.462974426896626 25.345637599996163 35 21.40337743481954 26.332642298076138 27.203634653498604 25.060345613605715 36 22.96204584826977 27.068906772625407 27.33968221975881 22.629365159346012 37 20.396697427333326 28.140371335473624 28.66740569048339 22.795525546709662 38 19.70650196993037 28.837165219811595 28.624935815301633 22.831396994956403 39 20.512469827193197 26.74318442483312 28.66716574768575 24.07718000028793 40 22.663916922205747 24.43673428254704 28.61329858961624 24.28605020563098 41 21.598450929298455 24.57794061895644 26.559988098837238 27.263620352907868 42 23.141163146705825 24.771334513851897 26.079862560765516 26.00763977867676 43 21.420653316249407 25.08505972176233 28.26166241967915 25.23262454230911 44 20.91053492847305 25.385828018600364 28.992288238483944 24.711348814442637 45 21.507512608994016 25.37970947726062 26.95073494478916 26.1620429689562 46 22.114447915616918 25.697633684129706 28.25806327771459 23.929855122538786 47 19.967319790961835 26.15472471362827 29.323529270621883 24.554426224788013 48 20.50431177207354 25.05950581381399 29.32712841258644 25.109054001526037 49 20.685948469884778 23.906460699769173 31.080030520723863 24.327560309622186 50 21.300082060436793 24.242380616461034 29.09750315524779 25.360034167854383 51 20.430169447603692 23.204388073883187 27.799532591430204 28.565909887082917 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 99.0 1 424.0 2 749.0 3 2315.0 4 3881.0 5 2625.5 6 1370.0 7 1415.0 8 1460.0 9 1571.5 10 1683.0 11 1822.5 12 1962.0 13 2022.0 14 2082.0 15 2046.0 16 2010.0 17 1961.5 18 1913.0 19 2087.5 20 2262.0 21 2560.5 22 2859.0 23 3416.5 24 3974.0 25 4374.5 26 5700.0 27 6625.0 28 7846.0 29 9067.0 30 10844.0 31 12621.0 32 14610.0 33 16599.0 34 19583.0 35 22567.0 36 24469.0 37 26371.0 38 29580.5 39 32790.0 40 37655.0 41 42520.0 42 47957.5 43 53395.0 44 58726.0 45 64057.0 46 72365.0 47 80673.0 48 87432.5 49 94192.0 50 90028.0 51 85864.0 52 73562.5 53 61261.0 54 54396.5 55 47532.0 56 41857.5 57 36183.0 58 32910.5 59 29638.0 60 27069.5 61 24501.0 62 21524.5 63 18548.0 64 16215.0 65 13882.0 66 11158.5 67 8435.0 68 6636.0 69 4837.0 70 4321.5 71 3806.0 72 3311.0 73 2816.0 74 2226.0 75 1220.0 76 804.0 77 681.5 78 559.0 79 444.0 80 329.0 81 255.5 82 182.0 83 143.0 84 104.0 85 65.5 86 27.0 87 26.0 88 25.0 89 14.5 90 4.0 91 3.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 833532.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.534547044898474 #Duplication Level Percentage of deduplicated Percentage of total 1 76.01276656291591 27.01079229442821 2 10.499716937251383 7.462053709297532 3 3.662240920943294 3.9040821688503535 4 1.6407117157562927 2.332077906026323 5 0.9775244821248207 1.736794484880223 6 0.6590897915837043 1.4052274323506082 7 0.47739313673322675 1.1874764213310947 8 0.396425558655511 1.1269442131075533 9 0.3257889277016525 1.0419085780309258 >10 5.057950843310809 42.63251569723956 >50 0.2333737014990357 5.176538984664266 >100 0.05337095851985829 3.0003775437764837 >500 0.001988979820615522 0.4877925251767553 >1k 0.0016574831838462678 1.4954180408401132 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGATATCGCTCGTATGCCGTCTTCTGC 3355 0.4025040430361402 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCGATATCGCTCGTATGCCGTCTTCTGC 2532 0.30376758180849683 Illumina Single End Adapter 1 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGATATCGCTCGTATGCCGTCTTCTGCT 2523 0.3026878392191302 Illumina Single End Adapter 1 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2219 0.2662165339782996 No Hit GCTGTCTCTTATACACATCTGACGCGATATCGCTCGTATGCCGTCTTCTGC 2066 0.24786090995906573 Illumina Single End Adapter 1 (95% over 21bp) TCCTGTCTCTTATACACATCTGACGCGATATCGCTCGTATGCCGTCTTCTG 968 0.11613231405632897 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.59914196455565E-4 0.0 0.0 0.3263222047863789 0.0 2 3.59914196455565E-4 0.0 0.0 1.3848298565621955 0.0 3 3.59914196455565E-4 0.0 0.0 1.9898456208040003 0.0 4 3.59914196455565E-4 0.0 0.0 2.6409304021921174 0.0 5 3.59914196455565E-4 0.0 0.0 3.69895816837266 0.0 6 3.59914196455565E-4 0.0 0.0 4.444940326226227 0.0 7 3.59914196455565E-4 0.0 0.0 5.142334067558294 0.0 8 3.59914196455565E-4 0.0 0.0 6.182006209719603 0.0 9 3.59914196455565E-4 0.0 0.0 6.740832985416277 0.0 10 3.59914196455565E-4 0.0 0.0 7.731316854061991 0.0 11 3.59914196455565E-4 0.0 0.0 9.50797329916548 0.0 12 3.59914196455565E-4 0.0 0.0 11.093035420355788 0.0 13 4.7988559527408663E-4 0.0 0.0 11.607832692686063 0.0 14 4.7988559527408663E-4 0.0 0.0 11.781071392580008 0.0 15 4.7988559527408663E-4 0.0 0.0 12.046208183968941 0.0 16 5.998569940926083E-4 0.0 0.0 12.728125614853418 0.0 17 5.998569940926083E-4 0.0 0.0 13.794191464754803 0.0 18 5.998569940926083E-4 0.0 0.0 14.923122327637092 0.0 19 5.998569940926083E-4 0.0 0.0 15.653268260846614 0.0 20 5.998569940926083E-4 0.0 0.0 16.382574394264406 0.0 21 5.998569940926083E-4 0.0 0.0 17.36585997898101 0.0 22 5.998569940926083E-4 0.0 0.0 18.434445228257584 0.0 23 5.998569940926083E-4 0.0 0.0 19.468118800477967 0.0 24 5.998569940926083E-4 0.0 0.0 20.298560823099773 0.0 25 5.998569940926083E-4 0.0 0.0 20.984077395948805 0.0 26 5.998569940926083E-4 0.0 0.0 21.590292874178797 0.0 27 5.998569940926083E-4 0.0 0.0 22.211864691457556 0.0 28 5.998569940926083E-4 0.0 0.0 22.844593848826438 0.0 29 5.998569940926083E-4 0.0 0.0 23.548705988492344 0.0 30 5.998569940926083E-4 0.0 0.0 24.34495616245087 0.0 31 5.998569940926083E-4 0.0 0.0 25.048348473723863 0.0 32 5.998569940926083E-4 0.0 0.0 25.689355657611227 0.0 33 5.998569940926083E-4 0.0 0.0 26.339480667808793 0.0 34 5.998569940926083E-4 0.0 0.0 26.974729224552867 0.0 35 5.998569940926083E-4 0.0 0.0 27.687119390737248 0.0 36 5.998569940926083E-4 0.0 0.0 28.331125859595073 0.0 37 5.998569940926083E-4 0.0 0.0 28.957976418421847 0.0 38 5.998569940926083E-4 0.0 0.0 29.610140942399333 0.0 39 5.998569940926083E-4 0.0 0.0 30.27490246325276 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTACGG 30 2.164781E-6 45.000004 2 ACGTTGT 20 7.03217E-4 45.0 30 CGATTAC 20 7.03217E-4 45.0 10 CGTTAGA 20 7.03217E-4 45.0 22 CTACGGG 80 0.0 45.0 3 TGCGACG 35 1.2113924E-7 45.0 28 ACTACGT 20 7.03217E-4 45.0 34 TTGCGAC 40 6.8102963E-9 45.0 27 TATACGA 25 3.8898805E-5 45.0 24 AGGCACG 85 0.0 42.35294 10 TGTACGG 65 0.0 41.538464 2 CGATTCA 55 6.002665E-11 40.909092 20 TACGGGA 220 0.0 40.909092 4 TCGTACA 55 6.002665E-11 40.909092 34 CGTTTTT 1445 0.0 40.32872 1 TTACCGG 45 1.9272193E-8 40.0 2 ACGGGAT 155 0.0 39.19355 5 TTCGGGC 365 0.0 38.835613 4 GGACCGA 495 0.0 38.636364 8 TACGGAC 35 6.246226E-6 38.571426 19 >>END_MODULE