##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933183.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1773399 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.17966289594163 33.0 31.0 34.0 30.0 34.0 2 32.368717925294874 34.0 31.0 34.0 30.0 34.0 3 32.44298378424709 34.0 31.0 34.0 30.0 34.0 4 35.9308339522014 37.0 35.0 37.0 35.0 37.0 5 35.10860556479393 37.0 35.0 37.0 35.0 37.0 6 34.8216616790694 37.0 35.0 37.0 32.0 37.0 7 35.62317673574869 37.0 35.0 37.0 33.0 37.0 8 35.916257424302145 37.0 35.0 37.0 35.0 37.0 9 37.785505687101434 39.0 38.0 39.0 35.0 39.0 10 37.285282105155126 39.0 37.0 39.0 34.0 39.0 11 37.18741524045068 39.0 37.0 39.0 34.0 39.0 12 36.94118074950984 39.0 37.0 39.0 33.0 39.0 13 36.83201637082236 39.0 35.0 39.0 33.0 39.0 14 37.721381933789296 40.0 37.0 41.0 33.0 41.0 15 37.87888230454624 40.0 37.0 41.0 33.0 41.0 16 37.95566254407497 40.0 37.0 41.0 33.0 41.0 17 37.9195505354407 40.0 36.0 41.0 33.0 41.0 18 37.91950260488474 40.0 36.0 41.0 33.0 41.0 19 37.89280528521782 40.0 36.0 41.0 33.0 41.0 20 37.76384333136536 40.0 36.0 41.0 33.0 41.0 21 37.637960774760785 40.0 36.0 41.0 33.0 41.0 22 37.74105940061994 39.0 36.0 41.0 33.0 41.0 23 37.663680311086225 39.0 35.0 41.0 33.0 41.0 24 37.59606664941167 39.0 35.0 41.0 33.0 41.0 25 37.481238570676986 39.0 35.0 41.0 33.0 41.0 26 37.43911043143703 39.0 35.0 41.0 33.0 41.0 27 37.399970339444195 39.0 35.0 41.0 33.0 41.0 28 37.300197530279426 39.0 35.0 41.0 32.0 41.0 29 37.22158239629096 39.0 35.0 41.0 32.0 41.0 30 37.11433467595279 39.0 35.0 41.0 32.0 41.0 31 36.97298915810824 39.0 35.0 41.0 31.0 41.0 32 36.92080067711778 39.0 35.0 41.0 31.0 41.0 33 36.79119419825995 39.0 35.0 41.0 31.0 41.0 34 36.58421539653513 39.0 35.0 41.0 31.0 41.0 35 36.443904614810315 39.0 35.0 41.0 30.0 41.0 36 36.30927614146619 39.0 35.0 40.0 30.0 41.0 37 36.2495270381905 39.0 35.0 40.0 30.0 41.0 38 36.11474236762285 38.0 35.0 40.0 30.0 41.0 39 36.06661219499954 38.0 35.0 40.0 30.0 41.0 40 35.9216701937917 38.0 35.0 40.0 29.0 41.0 41 35.74613552844002 38.0 35.0 40.0 29.0 41.0 42 35.684931591818874 38.0 35.0 40.0 29.0 41.0 43 35.57363571311363 38.0 34.0 40.0 28.0 41.0 44 35.499637137496975 38.0 34.0 40.0 28.0 41.0 45 35.4861714707181 38.0 34.0 40.0 28.0 41.0 46 35.2790313967697 37.0 34.0 40.0 28.0 41.0 47 35.16348999858464 37.0 34.0 40.0 27.0 41.0 48 35.0705819728104 37.0 34.0 40.0 27.0 41.0 49 35.13396759556084 37.0 34.0 40.0 27.0 41.0 50 34.92663692716642 37.0 34.0 40.0 27.0 41.0 51 33.79701917053072 35.0 32.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 25.0 10 29.0 11 29.0 12 30.0 13 35.0 14 40.0 15 70.0 16 109.0 17 245.0 18 495.0 19 878.0 20 1481.0 21 2479.0 22 3661.0 23 5379.0 24 8350.0 25 12479.0 26 16833.0 27 20638.0 28 23694.0 29 27627.0 30 33715.0 31 43447.0 32 56884.0 33 80817.0 34 130363.0 35 143428.0 36 160878.0 37 235793.0 38 362944.0 39 400364.0 40 151.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.105969384216408 4.267003646669474 52.89903738526975 16.72798958384436 2 21.334792677789938 4.259955035499625 51.49123237353804 22.914019913172385 3 22.275302963405302 4.645316705377639 50.632542366382296 22.446837964834764 4 18.908773490906448 4.85750809603479 50.484747087372895 25.748971325685872 5 17.777612370368992 7.850179232084827 50.22693708522448 24.145271312321707 6 22.035086294736832 7.547145340670655 52.32234821379734 18.095420150795167 7 83.61000541897226 2.075956961744086 9.997637305535868 4.31640031374778 8 86.13301349555289 2.215463074017748 7.792380620492061 3.8591428099373015 9 80.66148678329017 4.599021427214067 9.829034526353066 4.9104572631427 10 40.45372755933661 26.83214550137899 16.717444861534265 15.99668207775013 11 32.47560193729668 23.20543769337865 24.53446742667612 19.78449294264855 12 27.133656892780472 21.5784490687093 30.740403033947807 20.547491004562424 13 25.408326045069384 22.1967532405285 33.0555616643519 19.339359050050213 14 21.887347404616783 22.560179632445944 35.12655640383242 20.42591655910486 15 20.720548506004572 20.752464617381648 36.13676335669525 22.39022351991853 16 24.94982798569301 21.348100455678615 31.718863042101635 21.983208516526737 17 24.345282702877356 21.22511628798708 30.443233587026945 23.986367422108618 18 26.696191889134933 19.824529054093297 30.46595830943854 23.01332074733323 19 25.66139938051166 23.233068249164457 28.28573829127004 22.81979407905384 20 26.414529386787745 25.608732157850543 27.38870383935031 20.5880346160114 21 26.142283828963475 24.966067985828346 28.590012738250103 20.301635446958073 22 24.754214928507345 21.307218510893488 29.772938859218932 24.16562770138023 23 23.290415749642353 24.331298258316377 29.173412187556213 23.20487380448506 24 22.89185907965438 24.545519648990442 29.368123022512137 23.19449824884304 25 24.5465346489989 24.988961874908018 26.574673832566724 23.889829643526358 26 22.843477412584534 24.43217798137926 26.892650779660976 25.831693826375222 27 22.46978824280379 22.219421574050735 30.119617750996813 25.19117243214866 28 19.997699333314163 25.5452946573219 28.35464551406649 26.10236049529745 29 22.197091573864654 25.16985743197103 27.096947725807897 25.536103268356413 30 25.253876877115637 22.871728246153292 28.31957162488532 23.55482325184575 31 24.955297707960813 25.915938827077266 26.199913273888164 22.928850191073753 32 25.41881437849012 24.84635437371962 25.49792799026051 24.23690325752975 33 24.807784373398203 24.19010047936195 24.55995520466629 26.442159942573557 34 22.009316572299863 26.343592163974378 27.749085231242375 23.898006032483384 35 21.78956907046863 28.431503570262528 25.62869382468356 24.15023353458528 36 24.86986854058224 28.46826912612446 23.46285297330155 23.199009359991745 37 23.099257414716035 28.22715023522625 24.14453825676004 24.529054093297674 38 24.040613533671777 27.426991895224933 25.190890487701868 23.341504083401425 39 24.27293575783002 24.937929930038305 24.610648816199852 26.178485495931824 40 26.522288554352404 24.925411596600654 26.200082440556244 22.352217408490702 41 22.4403532425585 25.907029382558576 25.47695132341904 26.175666051463885 42 23.039654358663785 25.658072436039493 26.693598000224426 24.608675205072295 43 22.275697685630814 23.60585519671546 28.073998011727763 26.044449105925967 44 23.72912130885379 24.411314092316506 26.76797494528868 25.091589653541025 45 23.539541862829516 23.101174636954234 25.381992433738827 27.977291066477427 46 23.406069361717243 23.61284741899595 26.964321058036013 26.016762161250796 47 20.674873505623946 26.22173577407002 29.132530242771086 23.97086047753495 48 21.72534212548896 26.826111890217597 27.366994116947176 24.081551867346267 49 24.023978811310933 24.849906873749227 27.105236892543637 24.0208774223962 50 22.0223987946311 24.968718263628208 26.80541716782292 26.203465773917774 51 22.01083907231255 24.44204603701705 25.359662433552742 28.18745245711766 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 196.0 1 1022.0 2 1848.0 3 8046.0 4 14244.0 5 9273.0 6 4302.0 7 4253.0 8 4204.0 9 4338.0 10 4472.0 11 4419.0 12 4366.0 13 4265.0 14 4164.0 15 4187.0 16 4210.0 17 4470.5 18 4731.0 19 4660.5 20 4590.0 21 4913.0 22 5236.0 23 5589.0 24 5942.0 25 7058.0 26 9635.0 27 11096.0 28 12907.5 29 14719.0 30 17288.5 31 19858.0 32 24340.5 33 28823.0 34 33178.5 35 37534.0 36 40464.0 37 43394.0 38 46887.0 39 50380.0 40 55833.5 41 61287.0 42 69696.5 43 78106.0 44 88361.5 45 98617.0 46 115696.5 47 132776.0 48 151715.0 49 170654.0 50 173112.0 51 175570.0 52 163169.5 53 150769.0 54 139299.0 55 127829.0 56 120357.0 57 112885.0 58 103991.5 59 95098.0 60 83865.5 61 72633.0 62 68198.0 63 63763.0 64 56695.0 65 49627.0 66 42416.5 67 35206.0 68 29624.0 69 24042.0 70 20672.5 71 17303.0 72 14619.5 73 11936.0 74 10088.5 75 7024.0 76 5807.0 77 4177.0 78 2547.0 79 1927.5 80 1308.0 81 971.0 82 634.0 83 401.5 84 169.0 85 111.5 86 54.0 87 44.0 88 34.0 89 22.5 90 11.0 91 9.5 92 8.0 93 4.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1773399.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.178847476237838 #Duplication Level Percentage of deduplicated Percentage of total 1 76.30469974288681 23.79092595003592 2 9.56620608256287 5.965265607489727 3 3.3621624804603414 3.1448505350580738 4 1.6234110660925145 2.0246434408374063 5 0.9863968289989311 1.5377358141201163 6 0.7118994648516205 1.3317722899814406 7 0.5103783336199371 1.1139105753378713 8 0.41306157883563793 1.0303027171848274 9 0.3595545940352888 1.0089448062126196 >10 5.656825345645669 43.63794250276242 >50 0.4214639600609525 8.08648844064147 >100 0.07688519061918596 4.537964103827608 >500 0.004703554220155557 0.9991472665318637 >1k 0.0021708711785333344 1.3116839608896065 >5k 1.8090593154444456E-4 0.47842198908904077 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8482 0.4782905595413102 No Hit GCTGTCTCTTATACACATCTGACGCACACGAGATCGTATGCCGTCTTCTGC 3507 0.19775583498129862 Illumina Single End Adapter 1 (95% over 22bp) CTGTCTCTTATACACATCTGACGCACACGAGATCGTATGCCGTCTTCTGCT 3170 0.17875277926738428 Illumina Single End Adapter 1 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCACACGAGATCGTATGCCGTCTTCTGC 2848 0.16059555689385185 Illumina Single End Adapter 1 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCACACGAGATCGTATGCCGTCTTCTGC 2199 0.12399916769999307 Illumina Single End Adapter 1 (95% over 22bp) GCGCGCGGGAGAAACAAGCGAGATAGGAATGTCTTACACGCGGGGCAAGAC 2186 0.1232661121383287 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.691666680763889E-4 0.0 0.0 0.19228611271349538 0.0 2 1.691666680763889E-4 0.0 0.0 0.7305180616432061 0.0 3 1.691666680763889E-4 0.0 0.0 1.1030794536367732 0.0 4 1.691666680763889E-4 0.0 0.0 1.5704305686424769 0.0 5 1.691666680763889E-4 0.0 0.0 2.402166686684722 0.0 6 1.691666680763889E-4 0.0 0.0 3.2293916935782643 0.0 7 1.691666680763889E-4 0.0 0.0 3.9458125328817713 0.0 8 1.691666680763889E-4 0.0 0.0 5.082161431240234 0.0 9 1.691666680763889E-4 0.0 0.0 5.8415506042351435 0.0 10 1.691666680763889E-4 0.0 0.0 6.936622835582968 0.0 11 1.691666680763889E-4 0.0 0.0 8.476716181750412 0.0 12 1.691666680763889E-4 0.0 0.0 9.754826747956889 0.0 13 1.691666680763889E-4 0.0 0.0 10.221106474064776 0.0 14 1.691666680763889E-4 0.0 0.0 10.414238420118654 0.0 15 1.691666680763889E-4 0.0 0.0 10.640414255336786 0.0 16 1.691666680763889E-4 0.0 0.0 11.122764814911928 0.0 17 1.691666680763889E-4 0.0 0.0 11.795315098294292 0.0 18 1.691666680763889E-4 0.0 0.0 12.523803159920583 0.0 19 1.691666680763889E-4 0.0 0.0 12.999725386108823 0.0 20 1.691666680763889E-4 0.0 0.0 13.552674835161179 0.0 21 1.691666680763889E-4 0.0 0.0 14.290579841310388 0.0 22 1.691666680763889E-4 0.0 0.0 15.07179151448715 0.0 23 1.691666680763889E-4 0.0 0.0 15.805862076159961 0.0 24 1.691666680763889E-4 0.0 0.0 16.374487636454063 0.0 25 1.691666680763889E-4 0.0 0.0 16.88300264069169 0.0 26 1.691666680763889E-4 0.0 0.0 17.338060977817175 0.0 27 1.691666680763889E-4 0.0 0.0 17.82452792631551 0.0 28 2.255555574351852E-4 0.0 0.0 18.29311959688711 0.0 29 2.255555574351852E-4 0.0 0.0 18.86636904610863 0.0 30 2.255555574351852E-4 0.0 0.0 19.609123496742697 0.0 31 2.255555574351852E-4 0.0 0.0 20.11622877874635 0.0 32 2.255555574351852E-4 0.0 0.0 20.636077949745093 0.0 33 3.383333361527778E-4 0.0 0.0 21.167712398619827 0.0 34 3.947222255115741E-4 0.0 0.0 21.727090181059086 0.0 35 3.947222255115741E-4 0.0 0.0 22.424169631312523 0.0 36 3.947222255115741E-4 0.0 0.0 22.982927135968836 0.0 37 3.947222255115741E-4 0.0 0.0 23.504298806980266 0.0 38 3.947222255115741E-4 0.0 0.0 24.14606075677273 0.0 39 3.947222255115741E-4 0.0 0.0 25.322332988797218 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 4890 0.0 41.18098 1 GTCGATA 35 6.2502077E-6 38.57143 41 TATTGCG 105 0.0 38.57143 1 TACGCGG 105 0.0 38.57143 2 TTTGGGA 8205 0.0 38.418648 4 CTTTACG 65 9.094947E-12 38.07692 1 ACACGAC 2055 0.0 37.773724 26 AGACACG 2055 0.0 37.773724 24 TACGGGA 215 0.0 37.67442 4 TTGGGAC 2945 0.0 37.512737 5 TTGTTCG 390 0.0 37.500004 1 ACGGGTA 30 1.1401719E-4 37.499996 5 ATATCGG 30 1.1401719E-4 37.499996 29 CGTTTGG 1250 0.0 37.26 2 CACGACC 2085 0.0 37.230217 27 CGAGACA 2135 0.0 37.096016 22 TTACACG 2985 0.0 37.01005 34 GACACGA 2100 0.0 36.964287 25 ATTCCCG 55 2.750312E-9 36.81818 1 AAACACG 1975 0.0 36.79747 40 >>END_MODULE