##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933177.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 748564 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.097813947772 33.0 31.0 34.0 30.0 34.0 2 32.28696277138628 34.0 31.0 34.0 30.0 34.0 3 32.35962856883312 34.0 31.0 34.0 30.0 34.0 4 35.85861863514676 37.0 35.0 37.0 35.0 37.0 5 35.06305406084183 37.0 35.0 37.0 33.0 37.0 6 34.76209248641399 37.0 35.0 37.0 32.0 37.0 7 35.58722701064973 37.0 35.0 37.0 33.0 37.0 8 35.86922694652695 37.0 35.0 37.0 35.0 37.0 9 37.71535366381499 39.0 38.0 39.0 35.0 39.0 10 37.148006048914986 39.0 37.0 39.0 34.0 39.0 11 37.08247658182867 39.0 37.0 39.0 33.0 39.0 12 36.95011648970562 39.0 37.0 39.0 33.0 39.0 13 36.854806001891625 39.0 37.0 39.0 33.0 39.0 14 37.93695128272265 40.0 37.0 41.0 33.0 41.0 15 38.05437477623824 40.0 37.0 41.0 33.0 41.0 16 38.04640752160136 40.0 37.0 41.0 33.0 41.0 17 38.02275556933008 40.0 37.0 41.0 33.0 41.0 18 37.968176401750554 40.0 37.0 41.0 33.0 41.0 19 37.99363982237992 40.0 37.0 41.0 34.0 41.0 20 37.87346572904922 40.0 36.0 41.0 33.0 41.0 21 37.75613841969424 39.0 36.0 41.0 33.0 41.0 22 37.791550221490745 39.0 36.0 41.0 33.0 41.0 23 37.72213063946436 39.0 36.0 41.0 33.0 41.0 24 37.6728776697784 39.0 36.0 41.0 33.0 41.0 25 37.57330168161974 39.0 36.0 41.0 33.0 41.0 26 37.555997883948464 39.0 36.0 41.0 33.0 41.0 27 37.50818233310712 39.0 36.0 41.0 33.0 41.0 28 37.431479472697056 39.0 36.0 41.0 33.0 41.0 29 37.39142812104242 39.0 36.0 41.0 33.0 41.0 30 37.290480172704 39.0 36.0 41.0 32.0 41.0 31 37.21464029795715 39.0 35.0 41.0 32.0 41.0 32 37.21118167584869 39.0 35.0 41.0 32.0 41.0 33 37.11041407281141 39.0 35.0 41.0 32.0 41.0 34 37.025918959501126 39.0 35.0 41.0 31.0 41.0 35 36.91781731421762 39.0 35.0 41.0 31.0 41.0 36 36.77909704447449 39.0 35.0 41.0 31.0 41.0 37 36.72125295899883 39.0 35.0 41.0 31.0 41.0 38 36.60414473578746 39.0 35.0 40.0 31.0 41.0 39 36.57111082018371 39.0 35.0 40.0 31.0 41.0 40 36.481468518389875 39.0 35.0 40.0 30.0 41.0 41 36.39945415488856 39.0 35.0 40.0 30.0 41.0 42 36.30583356934076 39.0 35.0 40.0 30.0 41.0 43 36.128276272970645 38.0 35.0 40.0 30.0 41.0 44 36.05831966271421 38.0 35.0 40.0 30.0 41.0 45 36.05691163347422 38.0 35.0 40.0 30.0 41.0 46 35.803245948242235 38.0 35.0 40.0 29.0 41.0 47 35.713762617491625 38.0 35.0 40.0 29.0 41.0 48 35.643266307222895 38.0 34.0 40.0 28.0 41.0 49 35.724483143725855 38.0 35.0 40.0 29.0 41.0 50 35.53217226583165 38.0 34.0 40.0 28.0 41.0 51 34.361127438669236 36.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 10.0 10 21.0 11 18.0 12 16.0 13 13.0 14 23.0 15 25.0 16 34.0 17 84.0 18 119.0 19 268.0 20 455.0 21 792.0 22 1251.0 23 1778.0 24 2717.0 25 4112.0 26 5736.0 27 7156.0 28 8539.0 29 10328.0 30 12951.0 31 16913.0 32 21982.0 33 30544.0 34 50056.0 35 65075.0 36 68470.0 37 100034.0 38 159980.0 39 179001.0 40 57.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.66429056166206 4.427944704794781 54.68964577511074 16.218118958432413 2 20.30167093261231 4.128437915796111 53.72406367391432 21.84582747767726 3 20.80610341934691 4.552316168023041 51.83431209622691 22.80726831640314 4 19.208644818612704 4.56727814856178 50.88342479734532 25.3406522354802 5 17.181563633837587 7.994106048380632 50.08322601674673 24.74110430103505 6 20.6574187377432 7.725992700690923 53.37232354214202 18.244265019423857 7 82.44705863493303 2.0408408633062773 10.367984567785788 5.144115933974917 8 85.0503096595615 2.5609032761393817 7.48780331407869 4.900983750220423 9 78.73956001090086 5.3221902202082925 10.17387958811805 5.7643701807727865 10 37.10357431027941 27.671381471724526 17.932334443013556 17.2927097749825 11 28.53904275385939 24.376005258067444 26.168637551365016 20.91631443670815 12 25.65004461876339 21.281814247011614 32.40123756953313 20.666903564691864 13 22.74862269625576 23.897355469939775 33.930832901395206 19.423188932409253 14 20.244361203584464 25.819836380055676 33.12275236319139 20.813050053168467 15 18.23598249448277 23.581684398394792 37.11933782548987 21.062995281632567 16 20.24730016404743 22.271976744807393 34.20054931842835 23.28017377271683 17 21.144083872588048 22.106326245985645 30.135566230809925 26.61402365061638 18 22.03873015533742 22.08735659208832 32.19283855488642 23.68107469768784 19 24.113101885743905 24.144228148828958 29.23677868559001 22.50589127983713 20 25.564280408889555 24.336596470041304 28.591944042192786 21.507179078876355 21 24.476197092032212 25.26009800097253 28.68358617299256 21.580118734002703 22 22.642686530477018 23.41416365200571 28.982157838207556 24.960991979309718 23 21.309467193185885 24.911296829663197 27.69262214052506 26.08661383662586 24 22.580033236971055 23.405213181504855 29.872796447598336 24.141957133925757 25 20.916047258484245 24.761276256939954 28.558012407756717 25.764664076819084 26 19.631320768832058 26.791429991289988 27.96835006759609 25.608899172281863 27 19.928690132039478 24.92438856263459 30.42304999973282 24.72387130559311 28 18.74482342191182 24.426368353273734 32.11575763728953 24.713050587524915 29 19.30055412763638 23.40681625084829 31.440731854590926 25.851897766924402 30 21.4936865785691 25.005209975366167 29.828044095094075 23.673059350970657 31 22.271308799247628 26.18613772503086 27.26553774961126 24.27701572611026 32 22.856963466049663 26.4424952308687 25.541837438081444 25.158703865000188 33 21.700616112984328 25.60008229089296 26.566599515873058 26.132702080249654 34 20.115581299661752 24.91503732479788 27.461913744182194 27.507467631358175 35 19.721894186736204 24.19432406581134 28.39984289920434 27.68393884824811 36 21.639833067045704 24.82406313955787 28.292036485858258 25.244067307538167 37 20.163673379964838 27.127139429627928 29.217541853468777 23.491645336938458 38 20.498581283631058 27.888998135096 27.930143581577525 23.682276999695418 39 20.482417001084745 26.365681491495717 28.09873304086224 25.053168466557302 40 21.987565525459413 24.989312871043758 27.120059206694417 25.90306239680241 41 20.699499308008402 23.38904889895854 26.550969589774553 29.360482203258503 42 21.95737438615803 23.115591986790708 26.899102815524124 28.027930811527135 43 21.58038591222661 23.138435724934673 28.55854676420453 26.722631598634184 44 20.401061231905356 24.039761463281696 29.0283796709433 26.530797633869653 45 20.458370960933202 24.223847259552958 27.339412528521272 27.978369250992568 46 21.69553972673011 24.22358008132905 28.91696635157448 25.16391384036635 47 19.625977204353937 24.72974922651904 29.918884691222125 25.725388877904898 48 20.384095414687323 23.501664520334934 29.884552289450202 26.229687775527545 49 20.424172148273225 22.422264495754536 31.557221560213954 25.596341795758278 50 20.79635141417434 22.780416904900584 28.74784253584196 27.675389145083116 51 20.172089494017882 23.03637364340257 27.140631929935182 29.650904932644366 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 180.0 1 424.0 2 668.0 3 1956.5 4 3245.0 5 2248.5 6 1252.0 7 1295.0 8 1338.0 9 1417.5 10 1497.0 11 1548.0 12 1599.0 13 1649.0 14 1699.0 15 1709.5 16 1720.0 17 1769.0 18 1818.0 19 1850.5 20 1883.0 21 2136.0 22 2389.0 23 2717.0 24 3045.0 25 3535.5 26 4629.5 27 5233.0 28 6470.5 29 7708.0 30 8287.5 31 8867.0 32 10655.0 33 12443.0 34 14879.0 35 17315.0 36 18844.0 37 20373.0 38 22861.0 39 25349.0 40 29473.0 41 33597.0 42 39333.0 43 45069.0 44 50495.0 45 55921.0 46 63058.0 47 70195.0 48 77943.5 49 85692.0 50 82741.0 51 79790.0 52 68490.0 53 57190.0 54 49777.5 55 42365.0 56 38813.0 57 35261.0 58 32196.5 59 29132.0 60 26746.0 61 24360.0 62 22527.5 63 20695.0 64 17941.5 65 15188.0 66 12726.5 67 10265.0 68 8827.5 69 7390.0 70 6101.5 71 4813.0 72 4014.5 73 3216.0 74 2556.0 75 1639.0 76 1382.0 77 1112.0 78 842.0 79 607.0 80 372.0 81 262.5 82 153.0 83 109.0 84 65.0 85 56.5 86 48.0 87 28.5 88 9.0 89 7.0 90 5.0 91 3.5 92 2.0 93 2.5 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 748564.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.20623198843907 #Duplication Level Percentage of deduplicated Percentage of total 1 74.69747854140337 25.551192799386936 2 10.992866120803708 7.520490574921279 3 3.8834945672949823 3.9851914828420485 4 1.898615917055488 2.5977798606297204 5 1.065119227725255 1.8216857699458573 6 0.7053108370461507 1.447561566957647 7 0.5179934224060224 1.240302222271414 8 0.3929764173693218 1.0753793998816545 9 0.3236051612133498 0.9962381895408063 >10 5.2344851273118245 43.22356258511621 >50 0.2243428392282914 4.8378736422028 >100 0.059464366399466506 3.4990976139937673 >500 0.0019306612467359257 0.45198218462504425 >1k 0.002316793496083111 1.7516621076847858 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGC 2794 0.37324797879673616 TruSeq Adapter, Index 13 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGC 2747 0.36696929053494426 TruSeq Adapter, Index 13 (95% over 22bp) CTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGCT 2679 0.3578852309221389 Illumina Single End Adapter 2 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGC 2247 0.3001747345584345 TruSeq Adapter, Index 13 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1789 0.2389909212839517 No Hit TCCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTG 1006 0.1343906466247375 No Hit TTTTCTGGGGTCTGATGAGCGTCGGCATCGGGCGCCTTAACCCGGCGTTCG 903 0.1206309680935765 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.0076733585905813E-4 0.0 0.0 0.38981302867891054 0.0 2 4.0076733585905813E-4 0.0 0.0 1.5553780304690046 0.0 3 4.0076733585905813E-4 0.0 0.0 2.232006882511048 0.0 4 4.0076733585905813E-4 0.0 0.0 3.0167093261230837 0.0 5 4.0076733585905813E-4 0.0 0.0 4.227561036865251 0.0 6 4.0076733585905813E-4 0.0 0.0 5.060088382556468 0.0 7 4.0076733585905813E-4 0.0 0.0 5.854275653117169 0.0 8 4.0076733585905813E-4 0.0 0.0 7.100929245862745 0.0 9 4.0076733585905813E-4 0.0 0.0 7.821508915737332 0.0 10 5.343564478120775E-4 0.0 0.0 9.031024735359969 0.0 11 5.343564478120775E-4 0.0 0.0 11.051159286313528 0.0 12 5.343564478120775E-4 0.0 0.0 12.816272222548774 0.0 13 5.343564478120775E-4 0.0 0.0 13.405667384485495 0.0 14 5.343564478120775E-4 0.0 0.0 13.597234171026125 0.0 15 5.343564478120775E-4 0.0 0.0 13.890595860874955 0.0 16 5.343564478120775E-4 0.0 0.0 14.630946719318588 0.0 17 5.343564478120775E-4 0.0 0.0 15.800920161803132 0.0 18 5.343564478120775E-4 0.0 0.0 17.04396684852598 0.0 19 5.343564478120775E-4 0.0 0.0 17.822524192988176 0.0 20 5.343564478120775E-4 0.0 0.0 18.646368246402446 0.0 21 5.343564478120775E-4 0.0 0.0 19.743669211984546 0.0 22 5.343564478120775E-4 0.0 0.0 20.81812643942268 0.0 23 5.343564478120775E-4 0.0 0.0 21.87508349319497 0.0 24 5.343564478120775E-4 0.0 0.0 22.69104578900401 0.0 25 5.343564478120775E-4 0.0 0.0 23.343361422670608 0.0 26 5.343564478120775E-4 0.0 0.0 23.951058292944893 0.0 27 5.343564478120775E-4 0.0 0.0 24.52308687032772 0.0 28 5.343564478120775E-4 0.0 0.0 25.208666192870616 0.0 29 5.343564478120775E-4 0.0 0.0 25.913215169310842 0.0 30 5.343564478120775E-4 0.0 0.0 26.711543702342084 0.0 31 5.343564478120775E-4 0.0 0.0 27.406340673609737 0.0 32 5.343564478120775E-4 0.0 0.0 28.038350762259473 0.0 33 5.343564478120775E-4 0.0 0.0 28.694006123724893 0.0 34 5.343564478120775E-4 0.0 0.0 29.32534826681486 0.0 35 5.343564478120775E-4 0.0 0.0 30.002377886192765 0.0 36 5.343564478120775E-4 0.0 0.0 30.64694535136608 0.0 37 5.343564478120775E-4 0.0 0.0 31.307677099085716 0.0 38 5.343564478120775E-4 0.0 0.0 31.93781694016811 0.0 39 5.343564478120775E-4 0.0 0.0 32.60162123746266 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAATACG 20 7.031707E-4 45.000004 30 CGAATCT 20 7.031707E-4 45.000004 29 TACGTAA 20 7.031707E-4 45.000004 27 GTCGAAT 25 3.889497E-5 45.0 30 TTCGTAC 50 2.1827873E-11 45.0 33 CGAATAT 25 3.889497E-5 45.0 14 GCCGATT 160 0.0 43.593754 9 TTCACGG 115 0.0 43.04348 2 CTACGGG 60 3.6379788E-12 41.249996 3 TCGTACA 55 6.002665E-11 40.909092 34 GTTCACG 55 6.002665E-11 40.909092 1 CGTTAGG 50 1.0804797E-9 40.5 2 TAATGCG 95 0.0 40.263157 24 AGTCACG 45 1.9266736E-8 40.0 11 CGTTGAT 45 1.9266736E-8 40.0 25 TTCGTCG 90 0.0 40.0 1 CGTTTTT 1215 0.0 39.629627 1 TACGCGC 80 0.0 39.375004 34 GCGATAG 40 3.4560617E-7 39.375004 9 TTACACG 110 0.0 38.863636 34 >>END_MODULE