##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933176.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2077698 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.1427074579655 33.0 31.0 34.0 30.0 34.0 2 32.387650178226096 34.0 31.0 34.0 30.0 34.0 3 32.3621984523256 34.0 31.0 34.0 30.0 34.0 4 35.92029592366167 37.0 35.0 37.0 35.0 37.0 5 35.196628672694494 37.0 35.0 37.0 35.0 37.0 6 34.91302826493552 37.0 35.0 37.0 32.0 37.0 7 35.64740640843857 37.0 35.0 37.0 33.0 37.0 8 35.90798855271555 37.0 35.0 37.0 35.0 37.0 9 37.76211460953421 39.0 38.0 39.0 35.0 39.0 10 37.361453878282596 39.0 37.0 39.0 34.0 39.0 11 37.29756249464552 39.0 37.0 39.0 34.0 39.0 12 37.095320397863404 39.0 37.0 39.0 33.0 39.0 13 37.03482411784581 39.0 37.0 39.0 33.0 39.0 14 38.08853019062443 40.0 37.0 41.0 33.0 41.0 15 38.174706814946155 40.0 37.0 41.0 33.0 41.0 16 38.16092136585779 40.0 37.0 41.0 33.0 41.0 17 38.07762100170477 40.0 37.0 41.0 33.0 41.0 18 37.919017104507006 39.0 37.0 41.0 33.0 41.0 19 37.775326346754916 39.0 37.0 41.0 33.0 41.0 20 37.53660349097896 39.0 35.0 41.0 33.0 41.0 21 37.40883901317709 39.0 35.0 41.0 33.0 41.0 22 37.480575617823185 39.0 35.0 41.0 33.0 41.0 23 37.42251809454502 39.0 35.0 41.0 33.0 41.0 24 37.35226775017351 39.0 35.0 41.0 33.0 41.0 25 37.24955792420265 39.0 35.0 41.0 33.0 41.0 26 37.223319750993646 39.0 35.0 41.0 33.0 41.0 27 37.1990630977168 39.0 35.0 41.0 33.0 41.0 28 37.0889258207882 39.0 35.0 41.0 33.0 41.0 29 36.971908333164876 39.0 35.0 41.0 32.0 41.0 30 36.791403755502486 39.0 35.0 41.0 32.0 41.0 31 36.566597744234244 39.0 35.0 41.0 31.0 41.0 32 36.3343320347808 39.0 35.0 41.0 30.0 41.0 33 35.9459579784935 39.0 35.0 41.0 29.0 41.0 34 35.55224772801437 38.0 35.0 41.0 26.0 41.0 35 35.27900012417589 38.0 35.0 40.0 24.0 41.0 36 35.08339951234491 38.0 34.0 40.0 24.0 41.0 37 35.04202872602274 38.0 34.0 40.0 23.0 41.0 38 34.89163632058172 38.0 34.0 40.0 23.0 41.0 39 34.821170352957935 38.0 34.0 40.0 23.0 41.0 40 34.69941733591696 38.0 34.0 40.0 22.0 41.0 41 34.535263546482696 38.0 34.0 40.0 22.0 41.0 42 34.399174470977016 38.0 34.0 40.0 21.0 41.0 43 34.24662246389995 38.0 34.0 40.0 21.0 41.0 44 34.16415330813236 37.0 33.0 40.0 20.0 41.0 45 34.158622667971954 37.0 33.0 40.0 20.0 41.0 46 33.98201326660564 37.0 33.0 40.0 20.0 41.0 47 33.91129942850212 37.0 33.0 40.0 20.0 41.0 48 33.80361919778524 37.0 33.0 40.0 20.0 41.0 49 33.84370827714134 37.0 33.0 40.0 20.0 41.0 50 33.66154080140617 36.0 33.0 40.0 20.0 41.0 51 32.663487186299456 35.0 31.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 10.0 9 30.0 10 40.0 11 47.0 12 33.0 13 38.0 14 50.0 15 93.0 16 172.0 17 373.0 18 705.0 19 1445.0 20 2527.0 21 4117.0 22 6180.0 23 9631.0 24 15974.0 25 27568.0 26 40800.0 27 45971.0 28 44801.0 29 43847.0 30 45936.0 31 53147.0 32 64320.0 33 86373.0 34 141945.0 35 160213.0 36 174035.0 37 242660.0 38 392280.0 39 472172.0 40 165.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 19.762593023625186 4.17505335231588 50.93988635499481 25.12246726906413 2 28.06187424736415 3.7693639787880624 46.96818305644035 21.20057871740744 3 18.112545711648178 4.034465066626622 55.82534131524408 22.027647906481114 4 16.570454416378126 4.365023213190752 55.11595044130571 23.948571929125407 5 16.2221843598059 6.927907713248027 54.13881131906562 22.711096607880453 6 19.26290538855984 6.557160857834006 56.54825677263972 17.631676980966436 7 73.92421805286428 1.8206688363756427 18.939085468629223 5.316027642130859 8 77.2558379514251 2.0750368917908184 16.225986644834812 4.443138511949282 9 71.53002986959606 4.2978815978068035 18.549182797499924 5.622905735097208 10 35.49558212983793 22.88547228711776 25.12713589751735 16.491809685526963 11 29.18638801211726 21.39353265007715 31.24611950341195 18.173959834393642 12 24.5315247933049 19.180458372679766 35.65277533115977 20.635241502855564 13 22.643810601925786 18.63807925887208 38.24530802840451 20.472802110797623 14 19.859334706006358 19.82362210484873 39.8702795112668 20.446763677878113 15 19.786946899886317 19.446570194513352 40.04123794699711 20.725244958603223 16 22.087425602758437 20.010752284499482 37.77892648498483 20.12289562775726 17 21.516409025758314 20.563623779779352 36.78542309806333 21.134544096398997 18 22.70397333972502 20.217712102528857 36.19082272784591 20.887491829900206 19 21.8850381528018 23.828872146000045 34.23620757203405 20.049882129164104 20 23.007386058994136 25.02105695822973 32.60074370769958 19.37081327507655 21 22.602514898700388 25.240578755911592 33.113185843178364 19.043720502209656 22 20.919979708311796 22.015711619301747 35.02405065606262 22.040258016323836 23 20.32783397779658 23.194419978264406 34.11482323225031 22.362922811688705 24 20.6985808332106 23.13493106312852 34.503955820335776 21.662532283325103 25 22.4548033448557 23.01917795560279 32.47035902234107 22.05565967720044 26 20.552409445453574 22.58648754535067 33.295262352853975 23.565840656341777 27 20.326630723040594 20.89042777150481 34.89178889328478 23.891152612169815 28 19.90578033958737 22.438872251886462 34.152075999495594 23.50327140903057 29 22.14575939332858 21.716149315251783 32.91994312936721 23.218148162052426 30 24.63712243069012 19.81977168962958 34.72891632951469 20.814189550165615 31 23.942266874204048 21.373895532459482 33.81603101124418 20.867806582092296 32 24.706863076347 20.725341218983704 33.089505789580585 21.47828991508872 33 24.90626645450879 20.54013624694253 32.20073369662001 22.352863601928675 34 22.35950556818171 21.361911115089875 34.49534051628292 21.783242800445493 35 22.295925586875477 23.831615566843688 33.0490764297795 20.82338241650134 36 23.305841368668595 25.26671344921158 30.896983103415415 20.53046207870441 37 23.51684412267808 24.633753317373362 31.27389062318008 20.575511936768482 38 23.17983653062187 24.707585029200587 31.464197395386623 20.648381044790916 39 23.866558084957486 23.02524235957295 29.611762633452987 23.496436922016578 40 24.216945869900243 22.7088344889392 31.27976250638928 21.79445713477127 41 22.130405862642213 24.18667198023967 30.633759092996193 23.049163064121927 42 22.84302145932662 24.367400844588577 30.540579044692734 22.248998651392068 43 22.400416229885188 22.154278437000947 32.313647122921616 23.131658210192242 44 23.502741976937937 22.33967592980308 30.991655187616296 23.165926905642685 45 23.14282441432778 21.63350977861075 30.272878926581242 24.950786880480223 46 22.56121919547499 22.216125731458565 30.859730336170127 24.362924736896314 47 21.29611714503263 23.26680778438445 32.31422468520449 23.12285038537843 48 21.447245942384313 22.94549063434628 32.27966720861261 23.327596214656797 49 22.953817157257696 21.71740070019801 31.795429364614108 23.53335277793019 50 21.20125254007079 21.333658693419352 32.45880777668362 25.00628098982624 51 20.4760749637339 20.9780247177405 32.52773020910642 26.018170109419174 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 426.0 1 1356.0 2 2286.0 3 33361.0 4 64436.0 5 41902.0 6 19368.0 7 18931.5 8 18495.0 9 18487.5 10 18480.0 11 18314.0 12 18148.0 13 17424.5 14 16701.0 15 15749.0 16 14797.0 17 13842.0 18 12887.0 19 12135.5 20 11384.0 21 11018.0 22 10652.0 23 10423.0 24 10194.0 25 10920.5 26 12471.0 27 13295.0 28 15364.5 29 17434.0 30 19387.5 31 21341.0 32 25598.0 33 29855.0 34 34733.0 35 39611.0 36 42550.5 37 45490.0 38 49977.0 39 54464.0 40 60084.5 41 65705.0 42 74732.5 43 83760.0 44 97808.0 45 111856.0 46 139551.5 47 167247.0 48 187515.5 49 207784.0 50 208719.0 51 209654.0 52 189155.5 53 168657.0 54 151806.5 55 134956.0 56 122258.0 57 109560.0 58 101917.0 59 94274.0 60 86412.0 61 78550.0 62 69871.0 63 61192.0 64 53603.0 65 46014.0 66 37756.0 67 29498.0 68 24504.0 69 19510.0 70 16611.0 71 13712.0 72 11517.5 73 9323.0 74 8207.5 75 5451.5 76 3811.0 77 3054.0 78 2297.0 79 1667.0 80 1037.0 81 750.0 82 463.0 83 339.0 84 215.0 85 146.0 86 77.0 87 58.0 88 39.0 89 25.5 90 12.0 91 8.5 92 5.0 93 4.0 94 3.0 95 1.5 96 0.0 97 2.0 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2077698.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.41629412634605 #Duplication Level Percentage of deduplicated Percentage of total 1 74.72023848431562 25.71593704866928 2 8.170474222345774 5.623948879759613 3 3.1303272520861847 3.2320279025854424 4 1.8798203519183754 2.587858005452566 5 1.345975394917714 2.316174253915641 6 1.1143333667065551 2.301073494202454 7 0.9628612443256486 2.319668105129975 8 0.8554426386890589 2.355293236907218 9 0.8186892238836533 2.535862421452481 >10 6.80257110754767 38.65598716691557 >50 0.12126167063215344 2.892345907332162 >100 0.07133989576695186 4.555617057714118 >500 0.004254349062525554 0.9227320883650558 >1k 0.002127174531262777 1.8510280960188883 >5k 1.4181163541751848E-4 0.2442755793011268 >10k+ 1.4181163541751848E-4 1.8901707562785295 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 38728 1.8639860075910935 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTT 5005 0.24089160214814664 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCT 4399 0.21172470686307635 No Hit CGTTCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTC 4100 0.19733377998149876 No Hit CGCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTCTG 3965 0.1908362042991811 No Hit CCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTCTGC 3680 0.17711910008095497 No Hit CTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTCTGCT 3378 0.16258378262865922 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCC 2911 0.14010698378686412 No Hit CGTCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTCT 2335 0.11238399420897552 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9252076095755975E-4 0.0 0.0 0.17336494524228258 0.0 2 1.9252076095755975E-4 0.0 0.0 0.5737118676535281 0.0 3 1.9252076095755975E-4 0.0 0.0 1.0292159880791145 0.0 4 1.9252076095755975E-4 0.0 0.0 1.540888040514069 0.0 5 1.9252076095755975E-4 0.0 0.0 2.5588896942674055 0.0 6 1.9252076095755975E-4 0.0 0.0 4.326759711950437 0.0 7 1.9252076095755975E-4 0.0 0.0 5.8396359817451815 0.0 8 1.9252076095755975E-4 0.0 0.0 7.698038887268506 0.0 9 1.9252076095755975E-4 0.0 0.0 9.189064050694567 0.0 10 1.9252076095755975E-4 0.0 0.0 10.780007489057601 0.0 11 2.406509511969497E-4 0.0 0.0 12.558610539164016 0.0 12 2.406509511969497E-4 0.0 0.0 13.903801226164726 0.0 13 2.406509511969497E-4 0.0 0.0 14.4675501444387 0.0 14 2.406509511969497E-4 0.0 0.0 14.779481907380188 0.0 15 2.8878114143633964E-4 0.0 0.0 15.031828494805309 0.0 16 3.369113316757296E-4 0.0 0.0 15.407484629623747 0.0 17 4.3317171215450945E-4 0.0 0.0 15.90105973052869 0.0 18 4.3317171215450945E-4 0.0 0.0 16.45272797105258 0.0 19 4.813019023938994E-4 0.0 0.0 16.83372655698759 0.0 20 6.738226633514592E-4 0.0 0.0 17.24716489114395 0.0 21 6.738226633514592E-4 0.0 0.0 17.739777388244104 0.0 22 6.738226633514592E-4 0.0 0.0 18.291301238197274 0.0 23 6.738226633514592E-4 0.0 0.0 18.818038040177157 0.0 24 6.738226633514592E-4 0.0 0.0 19.257033505350634 0.0 25 6.738226633514592E-4 0.0 0.0 19.65574400129374 0.0 26 6.738226633514592E-4 0.0 0.0 19.998190304847 0.0 27 6.738226633514592E-4 0.0 0.0 20.377167422791956 0.0 28 6.738226633514592E-4 0.0 0.0 20.74699980459143 0.0 29 6.738226633514592E-4 0.0 0.0 21.17126743155165 0.0 30 6.738226633514592E-4 0.0 0.0 21.67307279498753 0.0 31 6.738226633514592E-4 0.0 0.0 22.056526020624748 0.0 32 6.738226633514592E-4 0.0 0.0 22.467365324508183 0.0 33 6.738226633514592E-4 0.0 0.0 22.865546388358656 0.0 34 6.738226633514592E-4 0.0 0.0 23.264738186204156 0.0 35 6.738226633514592E-4 0.0 0.0 23.704359343850744 0.0 36 6.738226633514592E-4 0.0 0.0 24.11341783069532 0.0 37 6.738226633514592E-4 0.0 0.0 24.528155679988142 0.0 38 6.738226633514592E-4 0.0 0.0 25.06129379726986 0.0 39 6.738226633514592E-4 0.0 0.0 25.79364277195242 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 21405 0.0 43.738613 1 CCATACG 125 0.0 39.600002 2 GTTTTTT 24520 0.0 38.65008 2 CGTTATT 580 0.0 38.405174 1 GAATCGT 30 1.1402393E-4 37.499996 9 TTGGGAC 3240 0.0 36.52778 5 CGTTTTC 690 0.0 36.521736 1 TGGGCGA 3420 0.0 35.921055 6 CGTTTAT 270 0.0 35.833332 1 TTTGGGA 8685 0.0 35.72539 4 GGAACAT 1790 0.0 35.446926 8 CACGACC 1590 0.0 35.377357 27 TATTGCG 115 0.0 35.21739 1 CGACCAA 1595 0.0 35.125393 29 CTTGGGA 4495 0.0 35.038933 4 TGGGAAC 3055 0.0 34.762684 6 TTACGGG 525 0.0 34.714287 3 TTGGGAG 4805 0.0 34.69823 5 ACAACGA 240 0.0 34.6875 13 GACACGA 1630 0.0 34.64724 25 >>END_MODULE