##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933175.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1421222 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.23841595472066 33.0 31.0 34.0 30.0 34.0 2 32.41433850587734 34.0 31.0 34.0 30.0 34.0 3 32.492943396598136 34.0 31.0 34.0 30.0 34.0 4 35.97102634211967 37.0 35.0 37.0 35.0 37.0 5 35.157239333475 37.0 35.0 37.0 35.0 37.0 6 34.79240892696567 37.0 35.0 37.0 32.0 37.0 7 35.623326264299315 37.0 35.0 37.0 33.0 37.0 8 35.86680968912668 37.0 35.0 37.0 35.0 37.0 9 37.77408033368467 39.0 38.0 39.0 35.0 39.0 10 37.312000517864206 39.0 37.0 39.0 34.0 39.0 11 37.25428961837067 39.0 37.0 39.0 34.0 39.0 12 37.12189439791954 39.0 37.0 39.0 34.0 39.0 13 37.0531282234584 39.0 37.0 39.0 33.0 39.0 14 38.23572179434318 40.0 37.0 41.0 33.0 41.0 15 38.30242425180584 40.0 38.0 41.0 34.0 41.0 16 38.322981912748325 40.0 37.0 41.0 34.0 41.0 17 38.24719572311715 40.0 37.0 41.0 34.0 41.0 18 38.207534783446924 40.0 37.0 41.0 34.0 41.0 19 38.20685367943924 40.0 37.0 41.0 34.0 41.0 20 38.076068341188076 40.0 37.0 41.0 34.0 41.0 21 38.00832100825909 40.0 37.0 41.0 33.0 41.0 22 38.046706285154606 40.0 37.0 41.0 34.0 41.0 23 37.936249931397064 40.0 36.0 41.0 33.0 41.0 24 37.8838928752862 40.0 36.0 41.0 33.0 41.0 25 37.78938195440262 40.0 36.0 41.0 33.0 41.0 26 37.76842745186889 40.0 36.0 41.0 33.0 41.0 27 37.70672843510725 40.0 36.0 41.0 33.0 41.0 28 37.6422768575212 40.0 36.0 41.0 33.0 41.0 29 37.57918326623145 40.0 36.0 41.0 33.0 41.0 30 37.49079946693761 40.0 36.0 41.0 33.0 41.0 31 37.40380179873377 40.0 36.0 41.0 33.0 41.0 32 37.345178304304326 40.0 35.0 41.0 32.0 41.0 33 37.24392881618776 39.0 35.0 41.0 32.0 41.0 34 37.06764741891133 39.0 35.0 41.0 31.0 41.0 35 36.939108035197876 39.0 35.0 41.0 31.0 41.0 36 36.82406126558694 39.0 35.0 41.0 31.0 41.0 37 36.76811996999765 39.0 35.0 41.0 31.0 41.0 38 36.679370992005474 39.0 35.0 41.0 31.0 41.0 39 36.60343282048829 39.0 35.0 41.0 31.0 41.0 40 36.45992322100277 39.0 35.0 41.0 30.0 41.0 41 36.307486796573656 39.0 35.0 41.0 30.0 41.0 42 36.305317536598785 39.0 35.0 40.0 30.0 41.0 43 36.210230351064084 39.0 35.0 40.0 30.0 41.0 44 36.1672898393073 38.0 35.0 40.0 30.0 41.0 45 36.1710190244733 38.0 35.0 40.0 30.0 41.0 46 35.928589622170215 38.0 35.0 40.0 29.0 41.0 47 35.78359538481673 38.0 35.0 40.0 29.0 41.0 48 35.72068473468607 38.0 35.0 40.0 29.0 41.0 49 35.78847780290482 38.0 35.0 40.0 29.0 41.0 50 35.57328411747074 38.0 34.0 40.0 28.0 41.0 51 34.51449034703938 37.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 12.0 10 37.0 11 29.0 12 20.0 13 22.0 14 28.0 15 58.0 16 59.0 17 164.0 18 295.0 19 556.0 20 1123.0 21 1885.0 22 3073.0 23 4133.0 24 5688.0 25 8023.0 26 10915.0 27 12835.0 28 14916.0 29 17895.0 30 22671.0 31 29559.0 32 38517.0 33 53872.0 34 89258.0 35 114777.0 36 123485.0 37 183422.0 38 295710.0 39 388008.0 40 173.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.18674492795636 4.218130594657274 52.6120479418416 15.983076535544763 2 20.559490354075578 7.234900669986814 51.549089445561634 20.656519530375974 3 21.42944592751871 7.199719677854691 49.76555386843153 21.605280526195063 4 18.089714344416283 4.74324208322134 52.86091828018423 24.30612529217814 5 19.422792498286686 8.171840852449511 48.30223568168801 24.10313096757579 6 20.869997790633693 9.553820585383564 52.8822379614163 16.69394366256644 7 81.85863995913377 2.2853572489027045 11.414965431157132 4.441037360806405 8 84.42333428556552 4.703698648064834 7.00946087240417 3.863506193965475 9 79.02481104289126 5.312892707824675 8.576140814031868 7.086155435252199 10 38.18066424527625 28.67553415300354 16.43754459190753 16.706257009812685 11 30.789841418159863 24.86479944723625 24.52537323514553 19.819985899458352 12 26.41276310104966 21.685352464287774 30.204500071065603 21.69738436359696 13 24.414975281834927 22.714818656057957 32.9491803532453 19.921025708861812 14 21.34156380917267 25.731729455356025 30.17016342274465 22.756543312726656 15 19.32787418151422 23.994703149824588 34.783376559045664 21.894046109615527 16 21.27957490103587 22.56325894195277 31.80333543950206 24.353830717509297 17 21.275564267932808 22.561781340283222 30.899746837580615 25.262907554203355 18 22.059959668510622 22.445191532357367 31.256341373831813 24.2385074253002 19 23.76884118033636 24.795070720830385 28.54107240107457 22.895015697758687 20 26.541314446300433 24.385141800506887 28.713529624506233 20.36001412868644 21 25.65524597846079 25.633433763338875 27.471007344383917 21.24031291381642 22 23.618266534010875 23.819290723053825 28.029259327536444 24.53318341539886 23 22.961718858841195 25.85957718076416 27.22467003747479 23.954033922919855 24 22.67590847875983 24.30612529217814 28.91033209449333 24.107634134568702 25 22.04321351625573 26.871382514484015 27.14903090439073 23.936373064869528 26 21.431627149030906 25.91614821611261 28.4772540813469 24.174970553509585 27 21.698087983439603 25.98489187473878 28.30993328276652 24.007086859055097 28 20.506718865877392 25.38505595888609 30.394125618657746 23.714099556578773 29 21.5558160512573 23.965362202386398 29.499050816832273 24.97977092952403 30 22.53004808538005 26.38074839820943 28.36643395613071 22.722769560279815 31 23.62403621672054 26.542088428127343 26.26598800187444 23.567887353277673 32 24.209799735720384 27.304953061520298 25.399831975581577 23.085415227177737 33 23.98541536790171 25.620838968155574 25.363525191701225 25.030220472241492 34 22.513442657093684 25.825873790301586 27.22481076144332 24.435872791161408 35 21.90066013613637 26.053213361459367 27.484094673457065 24.5620318289472 36 22.85969398165804 27.141009638184606 26.47207825378442 23.527218126372937 37 22.040750846806482 28.939250870025933 26.555668291090345 22.46432999207724 38 23.803107466673048 26.606962177618982 25.67649529770859 23.913435057999383 39 22.292576388488218 26.239320809838297 26.43380133434467 25.034301467328817 40 23.33498918536302 26.275346145781587 28.007306388446 22.382358280409395 41 20.134081797213945 27.10484357827278 27.56268900988023 25.19838561463304 42 20.674602560331884 26.741705377485008 27.407540834577564 25.17615122760554 43 21.27760476547647 24.79851845805933 27.78960640913242 26.134270367331773 44 22.200120741164998 24.488714641343858 28.18567401855586 25.125490598935286 45 22.339437470008207 24.520377534262767 26.80073908228271 26.339445913446312 46 22.746974082866718 26.724255605387476 27.133551267852596 23.395219043893213 47 20.30682046858267 26.3302284935077 29.55217411495178 23.81077692295785 48 21.02416089815666 25.29829963228827 28.417868566627874 25.2596709029272 49 21.684367396508076 24.018063328600316 29.928258920844176 24.369310354047432 50 21.722855401900617 24.198190008316786 28.19376564674625 25.885188943036347 51 20.63773288057742 24.705359190893468 26.77139813484452 27.885509793684587 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 279.0 1 1058.5 2 1838.0 3 4509.0 4 7180.0 5 5012.5 6 2845.0 7 2851.5 8 2858.0 9 2931.0 10 3004.0 11 3168.0 12 3332.0 13 3289.0 14 3246.0 15 3283.0 16 3320.0 17 3364.5 18 3409.0 19 3410.0 20 3411.0 21 4241.0 22 5071.0 23 5570.0 24 6069.0 25 7157.5 26 10094.5 27 11943.0 28 14304.5 29 16666.0 30 19504.0 31 22342.0 32 26331.0 33 30320.0 34 34855.0 35 39390.0 36 40729.0 37 42068.0 38 47033.0 39 51998.0 40 59133.5 41 66269.0 42 73689.5 43 81110.0 44 87824.5 45 94539.0 46 114215.0 47 133891.0 48 133172.5 49 132454.0 50 127342.0 51 122230.0 52 110446.0 53 98662.0 54 89188.0 55 79714.0 56 75565.5 57 71417.0 58 67322.0 59 63227.0 60 60375.0 61 57523.0 62 51404.0 63 45285.0 64 38530.0 65 31775.0 66 27649.5 67 23524.0 68 20181.5 69 16839.0 70 14739.0 71 12639.0 72 10717.0 73 8795.0 74 7126.5 75 4354.0 76 3250.0 77 2526.0 78 1802.0 79 1402.5 80 1003.0 81 767.0 82 531.0 83 402.5 84 274.0 85 196.5 86 119.0 87 76.5 88 34.0 89 22.0 90 10.0 91 6.0 92 2.0 93 2.5 94 3.0 95 4.0 96 5.0 97 4.0 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1421222.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.404988030687363 #Duplication Level Percentage of deduplicated Percentage of total 1 76.35054685988264 22.450869165512835 2 9.70310538468612 5.706393953943869 3 3.4336780762991492 3.0290178820443026 4 1.5995052142578774 1.8813372672109963 5 0.9710687189204833 1.427713202841586 6 0.6400018535180877 1.1291548105390257 7 0.47301947369982306 0.9736392373697734 8 0.3556475812191871 0.8366250295114486 9 0.3121218168810068 0.8260144460552158 >10 5.361138337645244 41.82159335408195 >50 0.7257396924516324 12.92362158774932 >100 0.06941748160787076 3.632389938647319 >500 0.001669836310279727 0.33325900846054857 >1k 0.0026240284875824285 1.6381668877263 >5k 7.15644132977026E-4 1.390204228305538 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGCGAACTCGTATGC 7553 0.5314440671478489 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAGCGAACTCGTATGCCG 6498 0.4572121737490695 No Hit GAATCTGTCTCTTATACACATCTGACGCTAGCGAACTCGTATGCCGTCTTC 5768 0.40584792523617 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3783 0.266179386471642 No Hit GCTGTCTCTTATACACATCTGACGCTAGCGAACTCGTATGCCGTCTTCTGC 3337 0.23479794148978833 RNA PCR Primer, Index 33 (95% over 24bp) CTGTCTCTTATACACATCTGACGCTAGCGAACTCGTATGCCGTCTTCTGCT 2921 0.20552735603586209 TruSeq Adapter, Index 1 (95% over 24bp) TCTGTCTCTTATACACATCTGACGCTAGCGAACTCGTATGCCGTCTTCTGC 2352 0.16549138698950622 RNA PCR Primer, Index 33 (95% over 24bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTAGCGAACT 1878 0.13213980644825368 No Hit CCTGTCTCTTATACACATCTGACGCTAGCGAACTCGTATGCCGTCTTCTGC 1872 0.13171763454266822 Illumina Paired End PCR Primer 2 (95% over 23bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1636 0.11511220625630621 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTAGCGAACTCGTATGCCGTC 1471 0.10350247885270562 No Hit GAACTGTCTCTTATACACATCTGACGCTAGCGAACTCGTATGCCGTCTTCT 1463 0.10293958297859167 RNA PCR Primer, Index 33 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.407239685284917E-4 0.0 0.0 0.22220314630648835 0.0 2 1.407239685284917E-4 0.0 0.0 0.820561460489635 0.0 3 1.407239685284917E-4 0.0 0.0 1.1622392560768127 0.0 4 1.407239685284917E-4 0.0 0.0 1.6836919214591386 0.0 5 1.407239685284917E-4 0.0 0.0 2.7641001898366335 0.0 6 1.407239685284917E-4 0.0 0.0 3.309405567884539 0.0 7 1.407239685284917E-4 0.0 0.0 3.8903844719544165 0.0 8 1.407239685284917E-4 0.0 0.0 4.74239773941017 0.0 9 1.407239685284917E-4 0.0 0.0 5.182863760904349 0.0 10 1.407239685284917E-4 0.0 0.0 6.44930911567651 0.0 11 1.407239685284917E-4 0.0 0.0 7.7433363682802545 0.0 12 1.407239685284917E-4 0.0 0.0 9.516669457692043 0.0 13 1.407239685284917E-4 0.0 0.0 9.918577111809414 0.0 14 1.407239685284917E-4 0.0 0.0 10.077173024341025 0.0 15 1.407239685284917E-4 0.0 0.0 10.371567566502629 0.0 16 2.1108595279273752E-4 0.0 0.0 10.865156886116313 0.0 17 2.1108595279273752E-4 0.0 0.0 11.53641021599722 0.0 18 2.1108595279273752E-4 0.0 0.0 12.262194083682916 0.0 19 2.814479370569834E-4 0.0 0.0 12.905584067795179 0.0 20 2.814479370569834E-4 0.0 0.0 13.44519012511768 0.0 21 2.814479370569834E-4 0.0 0.0 14.174421730032325 0.0 22 2.814479370569834E-4 0.0 0.0 14.952203104089298 0.0 23 4.2217190558547504E-4 0.0 0.0 15.688893079335951 0.0 24 4.925338898497209E-4 0.0 0.0 16.270434879279943 0.0 25 5.628958741139668E-4 0.0 0.0 16.795616729828275 0.0 26 5.628958741139668E-4 0.0 0.0 17.23516804552702 0.0 27 5.628958741139668E-4 0.0 0.0 17.67704130670648 0.0 28 5.628958741139668E-4 0.0 0.0 18.14382271031549 0.0 29 5.628958741139668E-4 0.0 0.0 18.643392798591634 0.0 30 5.628958741139668E-4 0.0 0.0 19.237318307766134 0.0 31 5.628958741139668E-4 0.0 0.0 19.74188409692504 0.0 32 5.628958741139668E-4 0.0 0.0 20.237936085987975 0.0 33 5.628958741139668E-4 0.0 0.0 20.739124499902196 0.0 34 5.628958741139668E-4 0.0 0.0 21.232432371578824 0.0 35 5.628958741139668E-4 0.0 0.0 21.760569425466255 0.0 36 5.628958741139668E-4 0.0 0.0 22.263235441050025 0.0 37 5.628958741139668E-4 0.0 0.0 22.76231299543632 0.0 38 5.628958741139668E-4 0.0 0.0 23.2328939461956 0.0 39 5.628958741139668E-4 0.0 0.0 23.73584140971643 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACGTT 20 7.033851E-4 45.0 18 ATCGCTA 20 7.033851E-4 45.0 24 TATACGT 30 2.165867E-6 44.999996 13 CGATGAA 495 0.0 43.181816 19 TTACGGG 345 0.0 41.739132 3 CGGTCTA 60 3.6379788E-12 41.249996 31 TATTGCG 55 6.184564E-11 40.909092 1 CGGGTAC 95 0.0 40.263157 6 TCCGATA 45 1.9288564E-8 40.000004 14 TACGGGT 90 0.0 40.000004 4 CGTTAGG 155 0.0 39.19355 2 TTTGGGC 3835 0.0 38.898308 4 CCGATGA 550 0.0 38.454544 18 TCGTTTG 430 0.0 38.197674 1 CGTTTGG 965 0.0 38.00518 2 TTTGGGA 7745 0.0 37.940605 4 TTGGGAC 3010 0.0 37.599667 5 CGACGGT 60 1.5643309E-10 37.499996 28 ATACGTC 30 1.140058E-4 37.499996 14 TGGGCGA 2710 0.0 37.44465 6 >>END_MODULE