SRR2933174.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933174.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1831426
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4830	0.2637289194321802	No Hit
CTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGCT	3644	0.19897063818030322	No Hit
TCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC	3425	0.1870127430756143	No Hit
GCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC	3372	0.18411882325575807	No Hit
CCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC	2850	0.1556164431432119	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTATAA	45	1.929402E-8	40.0	26
ATAGGCG	40	3.4597178E-7	39.375004	12
TATTGCG	120	0.0	39.375004	1
ACCGCAC	35	6.2503204E-6	38.571426	45
TTTGGGC	5050	0.0	38.361385	4
TCTAGCG	65	9.094947E-12	38.07692	1
TTGGGAC	3885	0.0	37.644787	5
TACGGGA	330	0.0	37.500004	4
TTTGGGA	8765	0.0	37.42727	4
TCGTTTG	650	0.0	37.384617	1
TTACGGG	490	0.0	37.19388	3
CGTTTGG	1350	0.0	37.166668	2
TTATGGG	1520	0.0	37.154606	3
TACCGGT	85	0.0	37.058826	40
TGGGCGA	3775	0.0	36.476818	6
GGCCGAT	765	0.0	36.47059	8
TATGGGA	995	0.0	36.407036	4
GCGATTG	1160	0.0	36.27155	9
TTGGGAG	5405	0.0	36.258095	5
CGTTTTT	2705	0.0	36.01664	1