##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933173.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1341451 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.24221682342478 33.0 31.0 34.0 30.0 34.0 2 32.425695012341116 34.0 31.0 34.0 31.0 34.0 3 32.49721681969748 34.0 31.0 34.0 30.0 34.0 4 35.97121847909465 37.0 35.0 37.0 35.0 37.0 5 35.18654874460565 37.0 35.0 37.0 35.0 37.0 6 34.864769566685624 37.0 35.0 37.0 32.0 37.0 7 35.65519351806365 37.0 35.0 37.0 35.0 37.0 8 35.94450486823596 37.0 35.0 37.0 35.0 37.0 9 37.82056444849644 39.0 38.0 39.0 35.0 39.0 10 37.35191296588545 39.0 37.0 39.0 34.0 39.0 11 37.243437889270645 39.0 37.0 39.0 34.0 39.0 12 36.85555566323332 39.0 35.0 39.0 33.0 39.0 13 36.64811014341933 39.0 35.0 39.0 33.0 39.0 14 37.32232261931297 40.0 36.0 41.0 31.0 41.0 15 37.53547166463777 40.0 36.0 41.0 32.0 41.0 16 37.70052875580249 40.0 36.0 41.0 33.0 41.0 17 37.74398095793286 40.0 36.0 41.0 33.0 41.0 18 37.73911905839274 40.0 36.0 41.0 33.0 41.0 19 37.743795338033216 40.0 36.0 41.0 33.0 41.0 20 37.61812917505 39.0 35.0 41.0 33.0 41.0 21 37.51246523354189 39.0 35.0 41.0 33.0 41.0 22 37.63955448242239 39.0 35.0 41.0 33.0 41.0 23 37.59562294858329 39.0 35.0 41.0 33.0 41.0 24 37.51850645308699 39.0 35.0 41.0 33.0 41.0 25 37.38633017531017 39.0 35.0 41.0 33.0 41.0 26 37.35554783588815 39.0 35.0 41.0 33.0 41.0 27 37.30403048639123 39.0 35.0 41.0 33.0 41.0 28 37.232025620018916 39.0 35.0 41.0 33.0 41.0 29 37.14507276076428 39.0 35.0 41.0 32.0 41.0 30 37.03391998664133 39.0 35.0 41.0 32.0 41.0 31 36.901207722086006 39.0 35.0 41.0 31.0 41.0 32 36.88248843975665 39.0 35.0 41.0 32.0 41.0 33 36.78284857218042 39.0 35.0 41.0 31.0 41.0 34 36.591725676152166 39.0 35.0 41.0 31.0 41.0 35 36.45757839831645 39.0 35.0 41.0 31.0 41.0 36 36.35330176055629 38.0 35.0 40.0 30.0 41.0 37 36.29853419916195 38.0 35.0 40.0 30.0 41.0 38 36.19555466431498 38.0 35.0 40.0 30.0 41.0 39 36.13903228668062 38.0 35.0 40.0 30.0 41.0 40 36.02106599495621 38.0 35.0 40.0 30.0 41.0 41 35.86712597031125 38.0 35.0 40.0 30.0 41.0 42 35.81746929257945 38.0 35.0 40.0 30.0 41.0 43 35.699992023562544 38.0 35.0 40.0 29.0 41.0 44 35.64171632061104 37.0 34.0 40.0 29.0 41.0 45 35.66629642081597 37.0 34.0 40.0 30.0 41.0 46 35.513281513823465 37.0 34.0 40.0 29.0 41.0 47 35.41398977674175 37.0 34.0 40.0 29.0 41.0 48 35.3146302026686 37.0 34.0 40.0 29.0 41.0 49 35.35872424710258 37.0 34.0 40.0 29.0 41.0 50 35.177893191775176 36.0 34.0 40.0 29.0 41.0 51 34.07546753478137 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 20.0 10 33.0 11 26.0 12 17.0 13 32.0 14 29.0 15 54.0 16 84.0 17 204.0 18 409.0 19 712.0 20 1124.0 21 1849.0 22 2722.0 23 3940.0 24 5542.0 25 8064.0 26 10984.0 27 13654.0 28 16207.0 29 19780.0 30 24758.0 31 31836.0 32 44046.0 33 66347.0 34 117218.0 35 114954.0 36 118792.0 37 169993.0 38 259655.0 39 308254.0 40 104.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.446289875664487 4.38189691610055 55.12329559559015 16.048517612644815 2 20.901098884715132 4.422673657107118 52.54347717508877 22.132750283088985 3 21.368428664185274 4.610082664219566 52.040290700144844 21.981197971450317 4 19.53943901044466 4.9480003369485726 50.86879804033095 24.643762612275815 5 17.974044523430226 7.780381094799586 49.80703730512706 24.438537076643126 6 22.20133273597023 7.640681620126266 52.362777320975574 17.795208322927934 7 83.9527496718106 2.190165723533696 9.259003869690357 4.598080734965347 8 86.63805088668911 2.445411722083028 6.863090787512924 4.053446603714932 9 81.45493201018897 4.636844730072139 9.024556245438706 4.883667014300187 10 46.19587297635172 22.440700405754665 15.790587952895782 15.572838664997827 11 36.88930866651111 21.154630321942435 22.66284791617435 19.2932130953721 12 31.782674134202445 19.264587375908622 29.20345208285655 19.749286407032386 13 28.570853501171495 20.414610746124907 31.732355486708048 19.282180265995553 14 22.769523448862465 21.44901304632074 35.46622276922526 20.315240735591537 15 20.967966776274345 19.352030003332214 37.9747750756457 21.70522814474774 16 27.124807391399315 19.181170240284587 31.051078272706196 22.642944095609906 17 27.901950947146037 19.055187256187516 27.687630781892146 25.355231014774297 18 28.696985577557438 18.48051102872934 30.106280438122603 22.716222955590627 19 28.332380385120292 21.746377616476487 26.867697739239077 23.053544259164145 20 26.975864194815912 25.951152893396777 26.35981485719568 20.713168054591634 21 26.294437888525184 23.436040526265963 29.545618885818413 20.723902699390436 22 24.582560227693744 20.60440522985931 30.625941610986906 24.18709293146004 23 23.295222859426097 22.75088691275343 29.806754029778205 24.14713619804227 24 23.97158002789517 24.100321219336376 28.24404320396347 23.684055548804988 25 26.14355649218645 23.050935144108877 25.482332191037916 25.323176172666763 26 23.13211589539983 22.110759170480325 27.053615823462803 27.703509110657045 27 22.13468848284432 21.806759993469758 30.551917289561825 25.506634234124093 28 20.77459407760701 22.601869170025594 29.118842208921535 27.50469454344587 29 23.472046314028617 24.182694708938307 27.333387503531625 25.011871473501458 30 25.952792908574374 22.394929073070877 28.606859288934146 23.045418729420604 31 26.29801610345812 22.657778778352693 28.65456882137327 22.389636296815908 32 28.000202765512867 22.517408388379447 25.647079170241778 23.835309675865908 33 27.37341878309383 22.923684875556393 25.404729654679898 24.29816668666988 34 22.680142621683537 22.162419648574566 30.841081783829598 24.3163559459123 35 22.420722039045778 25.3321217099991 28.134982194653404 24.112174056301722 36 25.706566993501813 25.812273426312256 25.524450762644328 22.956708817541603 37 23.386318247927058 27.604437284701415 26.307334371512635 22.70191009585889 38 25.693372325936615 25.042733577298016 26.053579295852032 23.21031480091334 39 24.05410260978597 22.31747562900173 26.133940039554183 27.494481721658115 40 25.25735192712965 21.20658898461442 28.06326880370584 25.47279028455009 41 21.41636183505771 22.015041921024324 26.859050386484483 29.70954585743348 42 21.19637616282667 23.153510638853003 28.76467347670545 26.88543972161488 43 21.868186016485133 22.71532840185739 29.71998231765454 25.696503264002935 44 23.717303129223506 21.6597549966417 28.68878550166946 25.93415637246534 45 22.784656316183 21.270549576540628 26.653750304707362 29.29104380256901 46 22.10367728675889 21.578946976072924 29.15097159717351 27.166404139994675 47 19.922158915979786 23.67555728833927 31.955844827727585 24.44643896795336 48 20.62855818065662 25.57134028749466 28.828410430198343 24.97169110165038 49 23.912763119935054 22.66098426256345 29.199426591056998 24.2268260264445 50 21.753981323208972 22.650995079209004 27.601380892779538 27.993642704802486 51 20.362204806586302 23.107366575447035 26.69579433016935 29.834634287797318 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 229.0 1 860.5 2 1492.0 3 3937.5 4 6383.0 5 4292.0 6 2201.0 7 2116.0 8 2031.0 9 2159.0 10 2287.0 11 2282.5 12 2278.0 13 2306.5 14 2335.0 15 2235.0 16 2135.0 17 2122.0 18 2109.0 19 2160.0 20 2211.0 21 2666.0 22 3121.0 23 3584.0 24 4047.0 25 4194.0 26 5517.0 27 6693.0 28 8196.5 29 9700.0 30 10644.0 31 11588.0 32 15155.0 33 18722.0 34 22465.0 35 26208.0 36 26905.0 37 27602.0 38 31357.5 39 35113.0 40 41022.5 41 46932.0 42 54961.0 43 62990.0 44 75533.0 45 88076.0 46 102956.0 47 117836.0 48 123508.0 49 129180.0 50 117302.5 51 105425.0 52 101366.5 53 97308.0 54 94515.0 55 91722.0 56 90605.5 57 89489.0 58 85064.0 59 80639.0 60 72966.0 61 65293.0 62 59882.5 63 54472.0 64 48558.5 65 42645.0 66 37222.5 67 31800.0 68 27312.0 69 22824.0 70 19306.5 71 15789.0 72 12938.0 73 10087.0 74 8943.5 75 5935.5 76 4071.0 77 3129.5 78 2188.0 79 1636.0 80 1084.0 81 788.0 82 492.0 83 361.5 84 231.0 85 194.5 86 158.0 87 108.5 88 59.0 89 36.5 90 14.0 91 14.0 92 14.0 93 10.0 94 6.0 95 3.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1341451.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.49590555007866 #Duplication Level Percentage of deduplicated Percentage of total 1 75.01104259400122 22.125186275655874 2 10.75445946468723 6.34425041225128 3 3.795455211667192 3.3585116532866786 4 1.8063792399839251 2.131231658007549 5 1.06408163325498 1.5693025676031165 6 0.6826632358768248 1.2081462196760338 7 0.5237544743531507 1.0814028754866138 8 0.40015927881324526 0.9442448234290458 9 0.3237299810515665 0.8593838050343184 >10 4.5517868726003865 35.5667387185392 >50 0.9964261953335987 18.12382986114838 >100 0.08536078940882044 4.6674058297496135 >500 0.0024742257725606323 0.4742209839712282 >1k 0.002226803195304569 1.5461443161610406 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3710 0.27656619585806713 No Hit CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCT 3078 0.22945303257442873 No Hit CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 2911 0.21700382645359392 No Hit GCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 2909 0.21685473416472165 No Hit TCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 2847 0.21223287320968118 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2015 0.15021048103881543 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 1422 0.10600461738818638 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.454614443613669E-5 0.0 0.0 0.24272224628406106 0.0 2 7.454614443613669E-5 0.0 0.0 0.9412196196506618 0.0 3 7.454614443613669E-5 0.0 0.0 1.3914037859004913 0.0 4 7.454614443613669E-5 0.0 0.0 1.8741646172689126 0.0 5 7.454614443613669E-5 0.0 0.0 2.6911158141445344 0.0 6 7.454614443613669E-5 0.0 0.0 3.3140233970528925 0.0 7 7.454614443613669E-5 0.0 0.0 3.8940669469104723 0.0 8 7.454614443613669E-5 0.0 0.0 4.818140953340823 0.0 9 7.454614443613669E-5 0.0 0.0 5.36851513771282 0.0 10 7.454614443613669E-5 0.0 0.0 6.262696140224279 0.0 11 7.454614443613669E-5 0.0 0.0 7.787164793943274 0.0 12 7.454614443613669E-5 0.0 0.0 9.133468162459904 0.0 13 7.454614443613669E-5 0.0 0.0 9.562332131400998 0.0 14 7.454614443613669E-5 0.0 0.0 9.74713202345818 0.0 15 7.454614443613669E-5 0.0 0.0 9.9825487475875 0.0 16 7.454614443613669E-5 0.0 0.0 10.489387983608793 0.0 17 7.454614443613669E-5 0.0 0.0 11.16947245929967 0.0 18 7.454614443613669E-5 0.0 0.0 11.947063291913011 0.0 19 7.454614443613669E-5 0.0 0.0 12.464338988155363 0.0 20 7.454614443613669E-5 0.0 0.0 13.066970019777091 0.0 21 7.454614443613669E-5 0.0 0.0 13.857308243089014 0.0 22 7.454614443613669E-5 0.0 0.0 14.67783765489757 0.0 23 7.454614443613669E-5 0.0 0.0 15.441711996934663 0.0 24 7.454614443613669E-5 0.0 0.0 16.049263074089176 0.0 25 7.454614443613669E-5 0.0 0.0 16.591735367150942 0.0 26 7.454614443613669E-5 0.0 0.0 17.06107789252086 0.0 27 7.454614443613669E-5 0.0 0.0 17.650588802721828 0.0 28 7.454614443613669E-5 0.0 0.0 18.172411813774787 0.0 29 7.454614443613669E-5 0.0 0.0 18.79919579619382 0.0 30 7.454614443613669E-5 0.0 0.0 19.525647973723974 0.0 31 7.454614443613669E-5 0.0 0.0 20.048887361521217 0.0 32 7.454614443613669E-5 0.0 0.0 20.565343050174775 0.0 33 7.454614443613669E-5 0.0 0.0 21.107517158658794 0.0 34 7.454614443613669E-5 0.0 0.0 21.727517441934143 0.0 35 7.454614443613669E-5 0.0 0.0 22.473798893884307 0.0 36 7.454614443613669E-5 0.0 0.0 23.048773305920232 0.0 37 7.454614443613669E-5 0.0 0.0 23.643204261653985 0.0 38 7.454614443613669E-5 0.0 0.0 24.370923723639553 0.0 39 7.454614443613669E-5 0.0 0.0 25.902399714935544 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGATAA 20 7.033708E-4 45.000004 15 ATTACGC 20 7.033708E-4 45.000004 38 TATGCGT 20 7.033708E-4 45.000004 11 ACGGGTA 20 7.033708E-4 45.000004 5 TTACGCC 20 7.033708E-4 45.000004 39 CGTCGAT 40 6.8157533E-9 45.000004 40 TCGAGTA 20 7.033708E-4 45.000004 32 CACGTTA 20 7.033708E-4 45.000004 44 TATACGT 20 7.033708E-4 45.000004 26 CGATAAC 20 7.033708E-4 45.000004 16 ATACCCG 20 7.033708E-4 45.000004 19 GTTATCG 25 3.8911556E-5 45.0 45 TAATGCG 50 1.0822987E-9 40.5 24 AAACACG 385 0.0 40.324673 40 TTATCGG 45 1.9286745E-8 40.0 2 CGTTTTT 1780 0.0 39.4382 1 AACACGT 400 0.0 39.375 41 TATGGGA 510 0.0 39.264706 4 ATGGGAC 270 0.0 39.166664 5 TTACGGG 370 0.0 38.918922 3 >>END_MODULE