##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933172.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1262657 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.174470184697824 33.0 31.0 34.0 30.0 34.0 2 32.35350217834297 34.0 31.0 34.0 30.0 34.0 3 32.43537714517878 34.0 31.0 34.0 30.0 34.0 4 35.91836579530308 37.0 35.0 37.0 35.0 37.0 5 35.11981638718987 37.0 35.0 37.0 35.0 37.0 6 34.830950923330725 37.0 35.0 37.0 32.0 37.0 7 35.65317580308825 37.0 35.0 37.0 35.0 37.0 8 35.92212928768462 37.0 35.0 37.0 35.0 37.0 9 37.78932520866712 39.0 38.0 39.0 35.0 39.0 10 37.26760394944945 39.0 37.0 39.0 34.0 39.0 11 37.17632579552483 39.0 37.0 39.0 34.0 39.0 12 37.01342882508868 39.0 37.0 39.0 33.0 39.0 13 36.945339866646286 39.0 37.0 39.0 33.0 39.0 14 38.057030531648735 40.0 37.0 41.0 33.0 41.0 15 38.149700195698436 40.0 37.0 41.0 33.0 41.0 16 38.166026086260956 40.0 37.0 41.0 34.0 41.0 17 38.11915825121153 40.0 37.0 41.0 33.0 41.0 18 38.08102279558106 40.0 37.0 41.0 33.0 41.0 19 38.10014279412382 40.0 37.0 41.0 34.0 41.0 20 38.01731269853967 40.0 37.0 41.0 34.0 41.0 21 37.904103806496934 40.0 36.0 41.0 33.0 41.0 22 37.94656189289728 40.0 36.0 41.0 33.0 41.0 23 37.868971541756785 40.0 36.0 41.0 33.0 41.0 24 37.81500993539813 40.0 36.0 41.0 33.0 41.0 25 37.72106597436992 39.0 36.0 41.0 33.0 41.0 26 37.70405660444602 39.0 36.0 41.0 33.0 41.0 27 37.64030532440718 39.0 36.0 41.0 33.0 41.0 28 37.571890069908136 39.0 36.0 41.0 33.0 41.0 29 37.52558929305425 39.0 36.0 41.0 33.0 41.0 30 37.40547591309437 39.0 36.0 41.0 33.0 41.0 31 37.34794643359202 39.0 35.0 41.0 32.0 41.0 32 37.3450105610629 39.0 35.0 41.0 33.0 41.0 33 37.22031874056058 39.0 35.0 41.0 32.0 41.0 34 37.11945286803938 39.0 35.0 41.0 32.0 41.0 35 37.04138574450543 39.0 35.0 41.0 31.0 41.0 36 36.90484510045088 39.0 35.0 41.0 31.0 41.0 37 36.869183000609034 39.0 35.0 41.0 31.0 41.0 38 36.79331837545747 39.0 35.0 41.0 31.0 41.0 39 36.795076572655915 39.0 35.0 41.0 31.0 41.0 40 36.73342879340945 39.0 35.0 41.0 31.0 41.0 41 36.66740928058847 39.0 35.0 41.0 31.0 41.0 42 36.59966641772073 39.0 35.0 40.0 31.0 41.0 43 36.44708658012429 39.0 35.0 40.0 30.0 41.0 44 36.360376570992756 38.0 35.0 40.0 30.0 41.0 45 36.37861351103269 38.0 35.0 40.0 30.0 41.0 46 36.17761118023343 38.0 35.0 40.0 30.0 41.0 47 36.101356900567616 38.0 35.0 40.0 30.0 41.0 48 36.02928903098783 38.0 35.0 40.0 30.0 41.0 49 36.102049091716914 38.0 35.0 40.0 30.0 41.0 50 35.91445182658473 38.0 35.0 40.0 30.0 41.0 51 34.92842395044735 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 18.0 10 18.0 11 15.0 12 16.0 13 19.0 14 26.0 15 32.0 16 48.0 17 92.0 18 189.0 19 344.0 20 695.0 21 1121.0 22 1802.0 23 2779.0 24 3932.0 25 5755.0 26 8067.0 27 10286.0 28 12426.0 29 15145.0 30 19599.0 31 25745.0 32 35103.0 33 49911.0 34 84807.0 35 107510.0 36 112814.0 37 166870.0 38 273623.0 39 323747.0 40 99.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.98691251860165 4.151879726639935 54.22953343623803 16.63167431852039 2 19.95965650212211 4.794572080937262 53.16740809261739 22.078363324323234 3 21.51526503238805 5.221528887100773 50.98589719931857 22.277308881192596 4 18.849774721084188 4.631186458396857 51.61076998741543 24.908268833103527 5 18.04266716931043 7.8337188959471975 49.77266193431787 24.350952000424503 6 22.195655668958395 7.666769360166696 52.31983032605054 17.817744644824366 7 83.21373104493144 1.8995657569712123 10.204909171691124 4.681794026406221 8 84.94943599093023 2.719503396409318 7.537914097019222 4.793146515641223 9 78.95485472301662 5.338583637519928 9.828084745104965 5.878476894358483 10 39.908225274163925 27.342421576089155 17.183922474591277 15.565430675155644 11 29.084779160136126 24.735537838066872 25.687102673172525 20.49258032862448 12 24.581339191878712 21.877437815653817 32.170732035699324 21.370490956768148 13 23.062953755453776 23.25120757260285 33.590357476337594 20.095481195605775 14 20.85356514081021 26.219392915098876 31.520040676129778 21.40700126796113 15 19.07572682050628 23.0490940928534 36.162552458822944 21.71262662781737 16 21.115156372633265 22.716303794300433 31.789789309369056 24.378750523697253 17 20.584133299858948 21.958536641384 30.938330837274098 26.518999221482954 18 21.863340558837436 21.356393699951767 32.43810472677853 24.342161014432264 19 23.32414899691682 22.873115976864657 30.290253014080626 23.512482012137898 20 25.883276297521814 24.034793296991978 29.203021881635316 20.878908523850896 21 24.932978631568194 25.53710152480048 28.407714842589872 21.122205001041454 22 23.23251682761035 23.014326139244467 28.949350457012475 24.80380657613271 23 22.622374880905898 24.75961405195552 27.60646794814427 25.01154311899431 24 22.41321277274826 23.49482084208142 29.082957604480075 25.009008780690245 25 21.034928725695103 24.932820235424188 28.617352139179523 25.41489889970119 26 20.573599956282663 25.108085568764913 29.24768959424452 25.070624880707904 27 20.733421665582974 25.702229504924933 29.544999156540534 24.019349672951563 28 19.573249108823696 24.947551076816584 31.0238647550364 24.455335059323318 29 21.362175159207926 23.522144176922158 30.946329842546312 24.169350821323608 30 21.63097341558317 25.044647913091207 30.487139421077934 22.83723925024769 31 22.999199307492056 26.26334784506006 26.46744127660956 24.27001157083832 32 23.380062835750326 25.699774364692868 26.90398104948533 24.01618175007148 33 22.56630264592839 24.488677447636213 28.134006305750493 24.811013600684905 34 20.632681717996256 24.18503203958003 29.205318625723375 25.976967616700342 35 20.127714810910643 24.237619559389444 29.356507745175453 26.27815788452446 36 21.550983362861015 25.606399837802346 29.898460151886063 22.944156647450576 37 21.04783801143145 27.583975695695663 28.444541946070867 22.92364434680202 38 21.020989865022727 27.405859231762864 27.563542593119113 24.0096083100953 39 22.24380809673569 23.252316345610883 29.85498041035689 24.648895147296535 40 21.036908677495155 22.245867246607748 30.638090946314 26.07913312958309 41 18.45742747238561 23.74342359009612 28.53047185419318 29.268677083325084 42 20.64099751555648 23.16876237964863 29.10719221451273 27.08304789028216 43 21.513918665164013 23.42290899270348 29.9554827637276 25.1076895784049 44 21.028355285718924 23.64735632875753 29.5213981310839 25.802890254439646 45 21.901118039182453 23.07158634530201 28.095832835045464 26.93146278047007 46 22.0549206950106 23.70105262157498 29.938455178247143 24.30557150516728 47 19.082933845058474 24.195723779300316 31.196595750073058 25.524746625568145 48 19.59360301332824 23.857864804139208 30.696697519595585 25.851834662936966 49 21.7025684726731 21.98783992802479 32.118936496609926 24.19065510269218 50 20.932604816668345 21.610777907222626 30.062558557074485 27.394058719034543 51 19.778292917237223 21.539895632780713 28.953072766396577 29.728738683585487 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 265.0 1 761.5 2 1258.0 3 3408.0 4 5558.0 5 3774.0 6 1990.0 7 1961.0 8 1932.0 9 2095.5 10 2259.0 11 2210.5 12 2162.0 13 2173.0 14 2184.0 15 2163.5 16 2143.0 17 2081.0 18 2019.0 19 2228.5 20 2438.0 21 2867.0 22 3296.0 23 3824.0 24 4352.0 25 5346.0 26 7768.0 27 9196.0 28 10601.5 29 12007.0 30 13747.0 31 15487.0 32 17769.0 33 20051.0 34 24895.5 35 29740.0 36 31026.0 37 32312.0 38 37743.5 39 43175.0 40 52757.5 41 62340.0 42 72952.5 43 83565.0 44 101996.0 45 120427.0 46 132809.0 47 145191.0 48 141141.0 49 137091.0 50 118418.0 51 99745.0 52 88775.5 53 77806.0 54 72599.0 55 67392.0 56 62299.0 57 57206.0 58 54076.0 59 50946.0 60 47957.0 61 44968.0 62 39624.5 63 34281.0 64 30225.0 65 26169.0 66 22165.0 67 18161.0 68 15321.5 69 12482.0 70 10628.0 71 8774.0 72 7654.0 73 6534.0 74 5232.0 75 3362.0 76 2794.0 77 2063.0 78 1332.0 79 1047.0 80 762.0 81 517.5 82 273.0 83 245.0 84 217.0 85 147.0 86 77.0 87 44.5 88 12.0 89 8.0 90 4.0 91 5.0 92 6.0 93 4.0 94 2.0 95 1.5 96 1.0 97 3.0 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1262657.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.341007832459344 #Duplication Level Percentage of deduplicated Percentage of total 1 73.95248814682915 23.177455102396294 2 11.261996881577163 7.059246649492852 3 4.406412127806033 4.143041910318382 4 2.128123239495494 2.6679010846986815 5 1.2481588856665489 1.9559278705914518 6 0.7879312987661181 1.4816736603641263 7 0.5245548134771691 1.1508053562419547 8 0.4075336357512692 1.0218011896056927 9 0.3143175907900533 0.8865927067347731 >10 4.084936131048788 33.725097530466094 >50 0.8034530220648715 15.518671139040654 >100 0.07467246370356495 4.219046468889973 >500 0.0027108815119245336 0.5357225075727219 >1k 0.0024644377381132124 2.0683553965239216 >5k 2.464437738113212E-4 0.38866142706256296 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGCT 5032 0.39852469831474424 No Hit GCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 4714 0.3733397114180652 No Hit TCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 4641 0.36755825216190935 No Hit CCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 4350 0.344511613209288 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3066 0.24282128875854647 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGC 2154 0.17059264709259916 No Hit GAATCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTC 1941 0.1537234577561444 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCG 1842 0.14588284862793302 No Hit TCCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTG 1728 0.1368542684196896 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.919807200213518E-5 0.0 0.0 0.4221257237713805 0.0 2 1.5839614400427036E-4 0.0 0.0 1.6149278861955385 0.0 3 1.5839614400427036E-4 0.0 0.0 2.2763901835573717 0.0 4 1.5839614400427036E-4 0.0 0.0 3.059579917586486 0.0 5 1.5839614400427036E-4 0.0 0.0 4.405392755118769 0.0 6 1.5839614400427036E-4 0.0 0.0 5.1876321122838585 0.0 7 1.5839614400427036E-4 0.0 0.0 5.9699506675209495 0.0 8 1.5839614400427036E-4 0.0 0.0 7.2250817126107885 0.0 9 1.5839614400427036E-4 0.0 0.0 7.893275846092803 0.0 10 1.5839614400427036E-4 0.0 0.0 9.20661747410421 0.0 11 1.5839614400427036E-4 0.0 0.0 11.193063516061764 0.0 12 1.5839614400427036E-4 0.0 0.0 13.225840430140568 0.0 13 1.5839614400427036E-4 0.0 0.0 13.81119338030835 0.0 14 1.5839614400427036E-4 0.0 0.0 14.005624647073592 0.0 15 1.5839614400427036E-4 0.0 0.0 14.346176356682774 0.0 16 1.5839614400427036E-4 0.0 0.0 15.115664824255518 0.0 17 1.5839614400427036E-4 0.0 0.0 16.216676421229202 0.0 18 1.5839614400427036E-4 0.0 0.0 17.441870595102234 0.0 19 1.5839614400427036E-4 0.0 0.0 18.27741025472476 0.0 20 1.5839614400427036E-4 0.0 0.0 19.125542407795624 0.0 21 1.5839614400427036E-4 0.0 0.0 20.202636187024662 0.0 22 1.5839614400427036E-4 0.0 0.0 21.316557069734696 0.0 23 1.5839614400427036E-4 0.0 0.0 22.40917367107615 0.0 24 1.5839614400427036E-4 0.0 0.0 23.275283786491503 0.0 25 1.5839614400427036E-4 0.0 0.0 23.994323082198886 0.0 26 1.5839614400427036E-4 0.0 0.0 24.648578355008524 0.0 27 1.5839614400427036E-4 0.0 0.0 25.275351896833424 0.0 28 1.5839614400427036E-4 0.0 0.0 25.92992396193107 0.0 29 1.5839614400427036E-4 0.0 0.0 26.624728647605803 0.0 30 1.5839614400427036E-4 0.0 0.0 27.44252793909985 0.0 31 2.3759421600640554E-4 0.0 0.0 28.14976672207892 0.0 32 3.167922880085407E-4 0.0 0.0 28.810199444504722 0.0 33 3.167922880085407E-4 0.0 0.0 29.498985076707292 0.0 34 3.167922880085407E-4 0.0 0.0 30.17327746173347 0.0 35 3.167922880085407E-4 0.0 0.0 30.899048593561037 0.0 36 3.167922880085407E-4 0.0 0.0 31.595912429107827 0.0 37 3.167922880085407E-4 0.0 0.0 32.25642434960563 0.0 38 3.167922880085407E-4 0.0 0.0 32.91986659876752 0.0 39 3.167922880085407E-4 0.0 0.0 33.619660762978384 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCCGT 25 3.8910242E-5 45.000004 38 ATGCGTA 25 3.8910242E-5 45.000004 34 CGTTAGT 20 7.033552E-4 45.0 31 GTATCGT 20 7.033552E-4 45.0 24 CGCAAAT 20 7.033552E-4 45.0 44 TAAGCGA 20 7.033552E-4 45.0 16 TTATTCG 20 7.033552E-4 45.0 1 CGATAAG 20 7.033552E-4 45.0 18 TCGTTAG 65 0.0 44.999996 1 CCCGTCA 70 0.0 41.785713 5 TCGTTTG 440 0.0 40.397728 1 CTAGCGG 80 0.0 39.375 2 AATCGTT 75 0.0 39.0 22 TATGCGT 35 6.2487798E-6 38.571426 11 TATCGAT 35 6.2487798E-6 38.571426 8 TGGGCGA 1990 0.0 38.55527 6 ACGGGAC 170 0.0 38.38235 5 CACGGGA 165 0.0 38.181816 4 TTGGGAC 2960 0.0 38.158787 5 TATGCGG 95 0.0 37.894737 2 >>END_MODULE