##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933170.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1741064 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.11840977700992 33.0 31.0 34.0 30.0 34.0 2 32.378863154944334 34.0 31.0 34.0 30.0 34.0 3 32.30144670155721 33.0 31.0 34.0 30.0 34.0 4 35.93783399116862 37.0 35.0 37.0 35.0 37.0 5 35.1716364246231 37.0 35.0 37.0 35.0 37.0 6 34.978863499561186 37.0 35.0 37.0 33.0 37.0 7 35.76470480120202 37.0 35.0 37.0 35.0 37.0 8 36.0248767420382 37.0 35.0 37.0 35.0 37.0 9 37.905225769988924 39.0 38.0 39.0 35.0 39.0 10 37.42876941915978 39.0 37.0 39.0 35.0 39.0 11 37.29967824272973 39.0 37.0 39.0 34.0 39.0 12 37.302010724476524 39.0 37.0 39.0 34.0 39.0 13 37.34369155872501 39.0 37.0 39.0 34.0 39.0 14 38.592333193954964 40.0 38.0 41.0 34.0 41.0 15 38.650657299214735 40.0 38.0 41.0 34.0 41.0 16 38.6023041082924 40.0 38.0 41.0 34.0 41.0 17 38.53150429852091 40.0 38.0 41.0 34.0 41.0 18 38.24795814513424 39.0 38.0 41.0 34.0 41.0 19 38.00026535497833 39.0 37.0 41.0 34.0 41.0 20 37.66670495742833 39.0 35.0 41.0 34.0 41.0 21 37.542353985838545 39.0 35.0 41.0 33.0 41.0 22 37.58536906167723 39.0 35.0 41.0 33.0 41.0 23 37.499998276915726 39.0 35.0 41.0 33.0 41.0 24 37.42870509068018 39.0 35.0 41.0 33.0 41.0 25 37.341081660409955 39.0 35.0 41.0 33.0 41.0 26 37.32212543594032 39.0 35.0 41.0 33.0 41.0 27 37.29133736611635 39.0 35.0 41.0 33.0 41.0 28 37.19010673932721 39.0 35.0 41.0 33.0 41.0 29 37.09251698961095 39.0 35.0 41.0 33.0 41.0 30 36.88007046265962 39.0 35.0 41.0 32.0 41.0 31 36.554845198108744 39.0 35.0 41.0 31.0 41.0 32 36.06328429052579 39.0 35.0 41.0 30.0 41.0 33 35.3567668965644 39.0 35.0 41.0 23.0 41.0 34 34.7183877215312 39.0 35.0 41.0 18.0 41.0 35 34.28720138949516 38.0 34.0 40.0 15.0 41.0 36 34.019722996971964 38.0 34.0 40.0 15.0 41.0 37 33.93099851585008 38.0 34.0 40.0 12.0 41.0 38 33.79438550219866 38.0 33.0 40.0 11.0 41.0 39 33.714631397811914 38.0 33.0 40.0 10.0 41.0 40 33.61348979704365 38.0 33.0 40.0 10.0 41.0 41 33.5115595980389 38.0 33.0 40.0 10.0 41.0 42 33.41538909540373 38.0 33.0 40.0 10.0 41.0 43 33.28717841503816 38.0 33.0 40.0 10.0 41.0 44 33.22676995216718 38.0 33.0 40.0 10.0 41.0 45 33.26755937748411 38.0 33.0 40.0 10.0 41.0 46 33.102435062697296 38.0 32.0 40.0 10.0 41.0 47 33.05996792765803 38.0 32.0 40.0 10.0 41.0 48 32.96144713807189 38.0 32.0 40.0 10.0 41.0 49 32.993381058938674 38.0 32.0 40.0 10.0 41.0 50 32.80409852825628 37.0 32.0 40.0 10.0 41.0 51 31.930400031245263 36.0 30.0 40.0 9.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 9.0 10 7.0 11 10.0 12 9.0 13 11.0 14 21.0 15 40.0 16 69.0 17 231.0 18 530.0 19 1299.0 20 2457.0 21 4055.0 22 6463.0 23 11267.0 24 20596.0 25 39353.0 26 56587.0 27 55520.0 28 44741.0 29 36957.0 30 35094.0 31 37901.0 32 44910.0 33 57446.0 34 86054.0 35 112922.0 36 132755.0 37 196259.0 38 335704.0 39 421630.0 40 154.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.120340205759238 3.686251625442832 49.229206967693315 26.964201201104608 2 32.62671561757638 3.305105383834253 44.70094149324781 19.36723750534156 3 15.676390988498987 3.476207652332137 60.83475392059109 20.012647438577787 4 14.42416820978436 3.5639126419247082 60.16217669195388 21.849742456337047 5 14.342034526013977 6.489077943142814 59.046249879384106 20.122637651459108 6 17.4128004484614 5.877785078549669 61.16771123864487 15.541703234344057 7 70.86402337880745 0.9349455275624561 23.85495306318435 4.34607803044575 8 73.40712346013703 1.1754306561964407 21.59288802709148 3.82455785657506 9 67.9963516562286 3.8816493822168514 23.57529648536757 4.546702476186976 10 30.422718521547743 25.729094392854023 30.212042750869582 13.636144334728648 11 20.254683343059188 22.255643675361732 40.70780855844472 16.78186442313436 12 17.67493900281667 20.416883009470073 43.6851258770499 18.223052110663364 13 18.00341630175571 20.413436840920266 45.246182793969666 16.336964063354362 14 16.727817013044895 22.756314529506096 43.7295814513424 16.78628700610661 15 15.361583491474178 22.510315531192422 44.910123924221054 17.21797705311235 16 16.87066069943437 22.583948665873283 43.079634062848925 17.465756571843425 17 16.92327220596141 22.16971920618656 41.751365831468576 19.155642756383454 18 18.087789995083465 21.285489792448757 41.85268318683288 18.7740370256349 19 18.1530374529598 23.652720405453216 40.30006938286014 17.89417275872685 20 19.069833159493275 23.667883547072364 39.384364963034095 17.87791833040026 21 18.870874361884457 24.585311051173306 39.930984731175876 16.61282985576636 22 18.56600331751159 22.476083590264345 39.39361218197608 19.564300910247987 23 16.824998966149433 23.920947190913143 39.072486709276625 20.181567133660796 24 16.81069736666774 23.096681109941965 40.602355800820646 19.490265722569646 25 17.238539192126197 24.040644111876418 39.09052165802061 19.63029503797678 26 17.3149292616469 24.274294339553286 39.2954538144491 19.115322584350718 27 17.861146976791204 22.86096318113521 40.223679313339424 19.054210528734153 28 17.159219879338153 21.992988195723996 40.867768215298234 19.98002370963962 29 17.397637306842253 21.109735196408632 40.66737351412699 20.825253982622122 30 18.85444762513038 21.934173585807297 40.222473154347 18.988905634715323 31 18.829807519999264 23.834965285595473 38.53896238162411 18.79626481278115 32 17.870853684873158 24.37877068275491 38.392327909829845 19.358047722542075 33 18.96518450786416 24.899716495200636 35.897876241195036 20.237222755740166 34 17.855575670969017 25.891064314694923 35.49794838099001 20.755411633346046 35 18.038567220963735 26.624466418236203 33.89708821731998 21.43987814348008 36 19.454827622649137 27.917296549696047 32.896493178883716 19.731382648771095 37 19.39876994757229 27.822871531431353 33.238927460449474 19.53943106054688 38 18.483237836173743 28.221018871218977 33.13628907380774 20.15945421879954 39 19.60370210400077 27.87404713439598 31.668221271590248 20.854029490013005 40 19.871699144890712 28.107582489787852 32.18491680949121 19.83580155583023 41 19.309341873704817 27.862100416756654 32.00755400146117 20.82100370807736 42 20.96602996788171 27.162757945715953 31.83220145841853 20.039010627983807 43 20.788150234569205 25.25030670900093 33.24886391310141 20.712679143328447 44 20.136364889515836 25.150655001769035 32.11817601190996 22.59480409680517 45 19.954522062371055 24.707420290121444 31.930704442800494 23.407353204707007 46 20.07525283389927 25.256050323250612 32.13540685465899 22.53328998819113 47 19.12887751397996 25.880955553615493 33.19602266200438 21.79414427040017 48 19.06242389711119 24.916143231954713 33.665505690773 22.355927180161096 49 20.023617741794673 23.993833655741547 33.41755386361444 22.564994738849347 50 18.816080281942536 24.0106624454931 33.414682056489596 23.758575216074767 51 18.120126543309148 24.021230695712507 32.68116508066331 25.177477680315025 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 123.0 1 576.5 2 1030.0 3 28544.5 4 56059.0 5 39725.0 6 23391.0 7 23488.5 8 23586.0 9 24029.0 10 24472.0 11 24598.5 12 24725.0 13 24163.0 14 23601.0 15 22897.5 16 22194.0 17 21385.0 18 20576.0 19 19539.0 20 18502.0 21 18218.0 22 17934.0 23 17365.0 24 16796.0 25 17308.0 26 19017.0 27 20214.0 28 21889.5 29 23565.0 30 26519.5 31 29474.0 32 33415.5 33 37357.0 34 43411.0 35 49465.0 36 54386.5 37 59308.0 38 64973.5 39 70639.0 40 81753.5 41 92868.0 42 105865.0 43 118862.0 44 140665.5 45 162469.0 46 176049.0 47 189629.0 48 178264.5 49 166900.0 50 143132.5 51 119365.0 52 103704.0 53 88043.0 54 75770.5 55 63498.0 56 55437.0 57 47376.0 58 41593.0 59 35810.0 60 31474.0 61 27138.0 62 22978.0 63 18818.0 64 14930.0 65 11042.0 66 8904.0 67 6766.0 68 5628.5 69 4491.0 70 3508.0 71 2525.0 72 2006.0 73 1487.0 74 1397.0 75 1157.5 76 1008.0 77 728.5 78 449.0 79 321.0 80 193.0 81 143.5 82 94.0 83 75.5 84 57.0 85 46.0 86 35.0 87 18.5 88 2.0 89 1.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1741064.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.83841773962947 #Duplication Level Percentage of deduplicated Percentage of total 1 77.7185751263432 32.51622212264723 2 9.034750350657994 7.559993186881858 3 3.410798907726037 4.281072885819415 4 1.8635407963358899 3.118703932477709 5 1.2064548683682417 2.523808138340009 6 0.9000350705831692 2.2593625958025316 7 0.688633298381992 2.016792932498728 8 0.5738684849407025 1.9207799520445898 9 0.4838092047565984 1.821763045339604 >10 3.965240986416642 30.0123476423005 >50 0.10160875995967533 2.952512775899156 >100 0.04709443869765866 3.541697692617072 >500 0.003074338757742972 0.8132052960796334 >1k 0.0022358827329039795 2.484400937976264 >5k 1.3974267080649872E-4 0.3125014240812165 >10k+ 1.3974267080649872E-4 1.8648354391944775 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 31896 1.8319832010770425 No Hit CTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGCT 5345 0.30699618164524684 No Hit CGCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTG 4684 0.26903089145488046 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCT 4180 0.24008307563650735 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTT 3988 0.22905533627712707 No Hit CCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC 3892 0.22354146659743696 No Hit TCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC 3579 0.20556395399594732 No Hit CGTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCT 2869 0.16478429282323911 No Hit CGTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTC 2830 0.162544283265865 No Hit GCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC 2797 0.16064889056347154 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCC 2578 0.14807037535667844 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGT 2212 0.12704874720285986 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTC 1946 0.11177073329871848 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1487228499354418E-4 0.0 0.0 0.3253183111017171 0.0 2 1.1487228499354418E-4 0.0 0.0 0.9832493234022414 0.0 3 1.1487228499354418E-4 0.0 0.0 1.6596747735867263 0.0 4 1.1487228499354418E-4 0.0 0.0 2.376937321086416 0.0 5 1.1487228499354418E-4 0.0 0.0 3.58131579310123 0.0 6 1.7230842749031626E-4 0.0 0.0 5.283321003708077 0.0 7 1.7230842749031626E-4 0.0 0.0 6.6481186217163755 0.0 8 1.7230842749031626E-4 0.0 0.0 8.34501201564101 0.0 9 1.7230842749031626E-4 0.0 0.0 9.458469074083434 0.0 10 1.7230842749031626E-4 0.0 0.0 10.790642963153566 0.0 11 1.7230842749031626E-4 0.0 0.0 12.642499069534491 0.0 12 1.7230842749031626E-4 0.0 0.0 14.172540469506004 0.0 13 1.7230842749031626E-4 0.0 0.0 14.869413186419338 0.0 14 1.7230842749031626E-4 0.0 0.0 15.195420731231017 0.0 15 1.7230842749031626E-4 0.0 0.0 15.47634090418273 0.0 16 1.7230842749031626E-4 0.0 0.0 15.991945155376253 0.0 17 1.7230842749031626E-4 0.0 0.0 16.751653012181055 0.0 18 1.7230842749031626E-4 0.0 0.0 17.609232055800362 0.0 19 1.7230842749031626E-4 0.0 0.0 18.185431437327978 0.0 20 2.2974456998708836E-4 0.0 0.0 18.78219295786944 0.0 21 2.2974456998708836E-4 0.0 0.0 19.54569160007903 0.0 22 2.2974456998708836E-4 0.0 0.0 20.362720727095613 0.0 23 2.2974456998708836E-4 0.0 0.0 21.208065872363107 0.0 24 2.2974456998708836E-4 0.0 0.0 21.87047690377838 0.0 25 2.2974456998708836E-4 0.0 0.0 22.45356862240561 0.0 26 2.2974456998708836E-4 0.0 0.0 22.9839913983633 0.0 27 2.2974456998708836E-4 0.0 0.0 23.530726038790075 0.0 28 2.2974456998708836E-4 0.0 0.0 24.093140746118465 0.0 29 2.2974456998708836E-4 0.0 0.0 24.71494442478852 0.0 30 2.2974456998708836E-4 0.0 0.0 25.405671474454703 0.0 31 2.2974456998708836E-4 0.0 0.0 26.002777611851144 0.0 32 2.2974456998708836E-4 0.0 0.0 26.578172887383808 0.0 33 2.2974456998708836E-4 0.0 0.0 27.135705522599974 0.0 34 2.2974456998708836E-4 0.0 0.0 27.689102755556373 0.0 35 2.8718071248386043E-4 0.0 0.0 28.272022165756113 0.0 36 2.8718071248386043E-4 0.0 0.0 28.82369631443761 0.0 37 4.020529974774046E-4 0.0 0.0 29.397827994835342 0.0 38 4.020529974774046E-4 0.0 0.0 29.956337044473955 0.0 39 4.020529974774046E-4 0.0 0.0 30.52989436344672 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGAAC 20 7.0342876E-4 45.000004 20 ACGTGCG 20 7.0342876E-4 45.000004 1 CGATCGG 30 2.166149E-6 45.000004 10 TAGTGCG 45 3.8562575E-10 45.0 1 CGTTTTT 27945 0.0 44.412235 1 CGTTATT 800 0.0 41.625004 1 TACGGGA 320 0.0 40.07813 4 GCGATGC 335 0.0 39.626865 9 GTTTTTT 31885 0.0 39.05833 2 CGTTTGG 1025 0.0 38.414635 2 GTCTTCG 195 0.0 38.076923 1 TTGTTCG 260 0.0 38.07692 1 GCCGATC 95 0.0 37.894737 9 GACCGAT 835 0.0 37.724552 9 ACTAGCG 30 1.14016315E-4 37.500004 20 TATCGCG 30 1.14016315E-4 37.500004 1 ACGACGA 30 1.14016315E-4 37.500004 22 CTAGCGG 90 0.0 37.5 2 GACACGA 230 0.0 37.173916 25 CGTTTCT 585 0.0 36.923077 1 >>END_MODULE