SRR2933166.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933166.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	855029
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC	3275	0.3830279440814288	No Hit
CTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGCT	3221	0.37671236882023884	No Hit
GCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC	2514	0.29402511493762196	No Hit
TCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC	2341	0.2737918830823282	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2066	0.24162923128923114	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACAACGT	30	2.1648466E-6	45.000004	30
TCGTTCA	80	0.0	45.0	16
TCGCAAT	20	7.032271E-4	45.0	30
ACCGGAT	20	7.032271E-4	45.0	13
GATCGAG	20	7.032271E-4	45.0	9
TTTCGTC	25	3.889964E-5	45.0	16
ATTAACG	20	7.032271E-4	45.0	15
CGTTCTA	25	3.889964E-5	45.0	34
ACTTACG	20	7.032271E-4	45.0	25
CTACGCG	25	3.889964E-5	45.0	1
CGAATAT	50	2.1827873E-11	45.0	14
CATACTA	20	7.032271E-4	45.0	26
CGTAAAG	20	7.032271E-4	45.0	17
CACGTTA	20	7.032271E-4	45.0	10
TCGACGG	25	3.889964E-5	45.0	2
TCGGTCA	25	3.889964E-5	45.0	24
TACGTTG	20	7.032271E-4	45.0	1
ATCGAAA	20	7.032271E-4	45.0	25
GGCTACG	35	1.211447E-7	45.0	1
TACGGGA	155	0.0	43.548386	4