##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933165.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2418002 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.17991672463464 33.0 31.0 34.0 30.0 34.0 2 32.429031076070245 34.0 31.0 34.0 31.0 34.0 3 32.37796081227393 34.0 31.0 34.0 30.0 34.0 4 35.96912492214646 37.0 35.0 37.0 35.0 37.0 5 35.17935014114959 37.0 35.0 37.0 35.0 37.0 6 34.96559721621405 37.0 35.0 37.0 33.0 37.0 7 35.765081666599116 37.0 35.0 37.0 35.0 37.0 8 36.03385274288441 37.0 35.0 37.0 35.0 37.0 9 37.90406500904466 39.0 38.0 39.0 35.0 39.0 10 37.40729908411986 39.0 37.0 39.0 34.0 39.0 11 37.293879409529026 39.0 37.0 39.0 34.0 39.0 12 37.29457254377788 39.0 37.0 39.0 34.0 39.0 13 37.36103320013797 39.0 37.0 39.0 34.0 39.0 14 38.621158708719015 40.0 38.0 41.0 34.0 41.0 15 38.67755320301637 40.0 38.0 41.0 34.0 41.0 16 38.63251312447219 40.0 38.0 41.0 34.0 41.0 17 38.56134155389449 40.0 38.0 41.0 34.0 41.0 18 38.31726731408824 39.0 38.0 41.0 34.0 41.0 19 38.09694574280749 39.0 37.0 41.0 34.0 41.0 20 37.79572845680028 39.0 35.0 41.0 34.0 41.0 21 37.66937041408568 39.0 35.0 41.0 33.0 41.0 22 37.710025467307304 39.0 35.0 41.0 33.0 41.0 23 37.61833737110226 39.0 35.0 41.0 33.0 41.0 24 37.544851079527646 39.0 35.0 41.0 33.0 41.0 25 37.44933916514544 39.0 35.0 41.0 33.0 41.0 26 37.42274158582168 39.0 35.0 41.0 33.0 41.0 27 37.38013243992354 39.0 35.0 41.0 33.0 41.0 28 37.26068258008058 39.0 35.0 41.0 33.0 41.0 29 37.16069755111865 39.0 35.0 41.0 33.0 41.0 30 36.96803476589349 39.0 35.0 41.0 32.0 41.0 31 36.67845146530069 39.0 35.0 41.0 31.0 41.0 32 36.26565279929462 39.0 35.0 41.0 30.0 41.0 33 35.64474719210323 39.0 35.0 41.0 25.0 41.0 34 35.11531917674179 39.0 35.0 41.0 21.0 41.0 35 34.746023369707714 39.0 35.0 41.0 18.0 41.0 36 34.524195596198844 39.0 34.0 41.0 17.0 41.0 37 34.437772177194226 39.0 34.0 41.0 16.0 41.0 38 34.34227970034764 39.0 34.0 41.0 15.0 41.0 39 34.26713666903501 39.0 34.0 41.0 15.0 41.0 40 34.2144361336343 39.0 34.0 40.0 15.0 41.0 41 34.107625634718254 38.0 34.0 40.0 15.0 41.0 42 33.98879984383801 38.0 34.0 40.0 14.0 41.0 43 33.85748812449287 38.0 33.0 40.0 12.0 41.0 44 33.804407936800715 38.0 33.0 40.0 12.0 41.0 45 33.84990789916634 38.0 33.0 40.0 12.0 41.0 46 33.684899764350895 38.0 33.0 40.0 10.0 41.0 47 33.636507331259445 38.0 33.0 40.0 10.0 41.0 48 33.524426778803324 38.0 33.0 40.0 10.0 41.0 49 33.56233948524443 38.0 33.0 40.0 10.0 41.0 50 33.38557619059041 38.0 33.0 40.0 10.0 41.0 51 32.54254173487036 37.0 31.0 40.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 4.0 10 18.0 11 10.0 12 14.0 13 11.0 14 24.0 15 53.0 16 109.0 17 314.0 18 862.0 19 1658.0 20 3117.0 21 5055.0 22 8392.0 23 14128.0 24 25189.0 25 47997.0 26 69981.0 27 70656.0 28 58856.0 29 49260.0 30 47368.0 31 51163.0 32 60327.0 33 77192.0 34 114726.0 35 150554.0 36 178717.0 37 267406.0 38 465308.0 39 649260.0 40 269.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.06449953308558 3.7933798235071765 49.565550400702726 26.576570242704513 2 30.04298590323747 3.3993354844206083 46.53987052119891 20.017808091143017 3 16.664171493654678 3.6647198802978656 59.187502739865394 20.483605886182062 4 14.657101193464687 3.7425113792296285 59.42422710982043 22.176160317485262 5 14.506894535240253 6.808307023732818 58.24751178865857 20.43728665236836 6 17.893120022233234 6.230764077118216 60.37542566135181 15.500690239296741 7 74.0020479718379 1.124151262075052 21.012803132503613 3.8609976335834295 8 76.6623435381774 1.3066573145927918 18.782201172703743 3.2487979745260755 9 71.05238126353906 4.2766714006026465 20.604532171602834 4.066415164255447 10 31.23248037015685 26.006760953878448 28.531324622560277 14.229434053404422 11 20.828229257047763 23.414372692826557 38.24649441977302 17.510903630352665 12 17.19080463953297 21.679221108998256 42.06270300851695 19.067271242951826 13 18.092127301797102 20.91449883002578 44.08333822718095 16.91003564099616 14 17.585510681959736 23.002834571683564 42.124117349778864 17.287537396577836 15 16.54365877282153 23.229550678618132 43.0161348088215 17.210655739738844 16 17.85995214230592 22.861974473139394 41.622298079157915 17.65577530539677 17 17.991672463463637 22.996961954539326 40.50191025483023 18.50945532716681 18 18.70048081018957 22.081578096296035 40.52002438376809 18.697916709746313 19 18.609744739665228 24.233230576318796 39.07308596105379 18.08393872296218 20 19.671075540880445 24.467556271665615 38.199182630949025 17.662185556504916 21 19.896344171758336 24.595182303405867 38.422507508265085 17.085966016570705 22 19.159041224945224 22.71416648952317 38.45538589298106 19.671406392550544 23 17.185800508022737 24.589888676684303 38.06179647494088 20.162514340352075 24 17.188323252007237 23.96718447710134 39.309893043926344 19.53459922696507 25 17.75833932312711 24.771319461274224 37.974203495282474 19.496137720316195 26 17.831540255136265 25.00725805851277 37.752450163399374 19.408751522951594 27 17.559497469398288 24.23401634903528 38.19810736302121 20.00837881854523 28 17.31743811626293 24.47082343190783 38.654227746709886 19.557510705119352 29 17.637206255412526 23.251428245303355 37.71063878359075 21.40072671569337 30 18.355692013488824 23.991295292559727 37.019282862462475 20.633729831488974 31 17.899819768552714 26.197207446478536 35.3700699999421 20.532902785026646 32 17.549820058047928 26.965941301950952 34.771021694771136 20.713216945229988 33 17.864873560898626 27.26358373566275 33.58777205312485 21.28377065031377 34 17.513881295383545 27.76461723356722 32.5839680860479 22.137533385001333 35 17.556313022073596 28.644889458321376 31.53793917457471 22.260858345030318 36 18.801597351863233 28.991911503795283 30.98913896679986 21.217352177541624 37 18.428355311534066 29.512878814823146 31.796954675802585 20.261811197840203 38 18.68972813091139 29.08000076095884 32.23984099268735 19.99043011544242 39 19.37223376986454 27.442078211680553 32.131611140106585 21.054076878348322 40 20.3218194195042 26.772599857237505 31.88066014833735 21.024920574920948 41 19.534227018836212 26.729465070748493 31.970610446145205 21.765697464270087 42 20.028478057503673 26.715403874769333 32.24728515526456 21.008832912462438 43 19.407924393776348 26.41896077836164 32.884464115414296 21.288650712447716 44 19.579140133052 26.930829668461815 31.566268348826842 21.923761849659346 45 19.654822452586888 26.407215544073164 30.679916724634637 23.25804527870531 46 20.06520259288454 26.285627555312196 30.753779359983984 22.895390491819278 47 19.26412798666006 26.682856341723454 31.668584227804608 22.384431443811874 48 19.002837880200264 26.233807912483115 32.32871602256739 22.43463818474923 49 19.6372873140717 25.194106539200543 32.4188317462103 22.749774400517452 50 19.28224211559792 24.676199606121088 32.56606073940386 23.47549753887714 51 18.581911842918245 24.538027677396464 32.05969225831905 24.820368221366234 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 195.0 1 819.0 2 1443.0 3 36021.0 4 70599.0 5 49913.0 6 29227.0 7 29092.0 8 28957.0 9 29399.5 10 29842.0 11 29763.0 12 29684.0 13 29066.5 14 28449.0 15 27662.0 16 26875.0 17 25794.5 18 24714.0 19 23651.0 20 22588.0 21 21846.5 22 21105.0 23 21314.5 24 21524.0 25 22884.5 26 27090.5 27 29936.0 28 33019.5 29 36103.0 30 42209.0 31 48315.0 32 53263.0 33 58211.0 34 65513.0 35 72815.0 36 80778.5 37 88742.0 38 97291.5 39 105841.0 40 118590.0 41 131339.0 42 149766.0 43 168193.0 44 192802.5 45 217412.0 46 229023.5 47 240635.0 48 230471.0 49 220307.0 50 194125.5 51 167944.0 52 149552.0 53 131160.0 54 115482.0 55 99804.0 56 86865.5 57 73927.0 58 65588.5 59 57250.0 60 49644.0 61 42038.0 62 34832.5 63 27627.0 64 22589.0 65 17551.0 66 13780.0 67 10009.0 68 7800.5 69 5592.0 70 4367.0 71 3142.0 72 2426.5 73 1711.0 74 1479.0 75 1036.0 76 825.0 77 645.0 78 465.0 79 374.0 80 283.0 81 178.0 82 73.0 83 51.5 84 30.0 85 19.5 86 9.0 87 10.5 88 12.0 89 8.0 90 4.0 91 3.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2418002.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.68771770615412 #Duplication Level Percentage of deduplicated Percentage of total 1 76.55143754701334 28.08497530725112 2 8.269774628263189 6.067983141104709 3 3.085446031998449 3.3959391905859735 4 1.7938713029113305 2.6325217584952707 5 1.2545037510908215 2.3012439740665744 6 0.9651285109465354 2.124501741586042 7 0.785322238870169 2.0168176425623585 8 0.6567576066047972 1.9275950137988975 9 0.5967815298727297 1.9705097070195736 >10 5.88203979983245 39.48393783916419 >50 0.10486206403092262 2.645381757194556 >100 0.04915120913540331 3.2527614211861735 >500 0.002977168957562943 0.7681915845455289 >1k 0.0018321039738848828 1.7190418702615653 >5k 0.0 0.0 >10k+ 1.1450649836780517E-4 1.6085980511775562 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 38291 1.5835801624647126 No Hit CTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTCTGCT 4472 0.18494608358471168 Illumina Single End Adapter 1 (95% over 22bp) CGTTTTCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCT 3525 0.14578151713687582 No Hit TCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTCTGC 3325 0.13751022538442895 Illumina Single End Adapter 1 (95% over 21bp) CGTTTCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTT 3270 0.1352356201525061 No Hit CCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTCTGC 3224 0.1333332230494433 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTCTGC 3072 0.1270470413175837 Illumina Single End Adapter 1 (95% over 21bp) CGTTCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTC 2725 0.11269635012708838 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCC 2636 0.10901562529724955 No Hit CGCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTCTG 2512 0.10388742441073251 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.6542583504893708E-4 0.0 0.0 0.20397005461533943 0.0 2 1.6542583504893708E-4 0.0 0.0 0.6605453593504058 0.0 3 1.6542583504893708E-4 0.0 0.0 1.06377083228219 0.0 4 1.6542583504893708E-4 0.0 0.0 1.6011153009799 0.0 5 1.6542583504893708E-4 0.0 0.0 2.531594266671409 0.0 6 1.6542583504893708E-4 0.0 0.0 3.925472352793753 0.0 7 1.6542583504893708E-4 0.0 0.0 5.103138872507136 0.0 8 1.6542583504893708E-4 0.0 0.0 6.560623192205797 0.0 9 1.6542583504893708E-4 0.0 0.0 7.655287299183375 0.0 10 2.0678229381117138E-4 0.0 0.0 8.838412871453373 0.0 11 2.0678229381117138E-4 0.0 0.0 10.259048586394883 0.0 12 2.0678229381117138E-4 0.0 0.0 11.474018631911802 0.0 13 2.0678229381117138E-4 0.0 0.0 12.030304358722615 0.0 14 2.0678229381117138E-4 0.0 0.0 12.293827713955572 0.0 15 2.894952113356399E-4 0.0 0.0 12.534315521657964 0.0 16 2.894952113356399E-4 0.0 0.0 12.937830489801083 0.0 17 3.3085167009787417E-4 0.0 0.0 13.523644728168133 0.0 18 3.3085167009787417E-4 0.0 0.0 14.185844345869027 0.0 19 3.3085167009787417E-4 0.0 0.0 14.66566198042847 0.0 20 3.3085167009787417E-4 0.0 0.0 15.136505263436506 0.0 21 3.3085167009787417E-4 0.0 0.0 15.715040765061403 0.0 22 3.3085167009787417E-4 0.0 0.0 16.31826607256735 0.0 23 3.3085167009787417E-4 0.0 0.0 16.928439265145357 0.0 24 3.3085167009787417E-4 0.0 0.0 17.405775512179062 0.0 25 3.3085167009787417E-4 0.0 0.0 17.842044795661874 0.0 26 3.7220812886010847E-4 0.0 0.0 18.234310807021664 0.0 27 4.1356458762234277E-4 0.0 0.0 18.646345205669807 0.0 28 4.962775051468113E-4 0.0 0.0 19.082449063317565 0.0 29 4.962775051468113E-4 0.0 0.0 19.56272161892339 0.0 30 4.962775051468113E-4 0.0 0.0 20.092208360456276 0.0 31 4.962775051468113E-4 0.0 0.0 20.557675303825224 0.0 32 4.962775051468113E-4 0.0 0.0 21.01648385733345 0.0 33 4.962775051468113E-4 0.0 0.0 21.47884906629523 0.0 34 5.376339639090456E-4 0.0 0.0 21.926863584066513 0.0 35 5.376339639090456E-4 0.0 0.0 22.387450465301516 0.0 36 5.789904226712799E-4 0.0 0.0 22.84026233228922 0.0 37 5.789904226712799E-4 0.0 0.0 23.284099847725518 0.0 38 5.789904226712799E-4 0.0 0.0 23.75870656848092 0.0 39 5.789904226712799E-4 0.0 0.0 24.24030253076714 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 34460 0.0 44.33401 1 CGTTATT 870 0.0 41.37931 1 GTTTTTT 38500 0.0 39.769478 2 ACACGCG 540 0.0 38.750004 36 ACTCGCG 35 6.25115E-6 38.57143 1 TTGCGCG 310 0.0 38.46774 1 TCTCGCG 250 0.0 37.8 1 GACACGA 340 0.0 37.72059 25 GCGAGAC 345 0.0 37.173912 21 CCGTACT 135 0.0 36.666668 44 TGGGCGA 3965 0.0 36.374527 6 ATGGGCG 330 0.0 36.136364 5 TACACGC 580 0.0 36.077583 35 CGTTTAT 515 0.0 35.82524 1 TTTGGGA 13250 0.0 35.55849 4 TAGGGCG 405 0.0 35.555553 5 CACGACC 355 0.0 35.492958 27 TTGGGCG 3000 0.0 35.475 5 GGCCGTA 140 0.0 35.357143 42 TTGGGCA 3840 0.0 35.273438 5 >>END_MODULE