SRR2933162.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933162.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	819119
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGC	2650	0.3235183166304285	No Hit
CTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGCT	2370	0.28933524921287385	Illumina Single End Adapter 1 (95% over 21bp)
TCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGC	2301	0.28091156474211926	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1998	0.2439206025009797	No Hit
CCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGC	1986	0.24245561389737025	No Hit
TTTCCTGGGGTTTTATCCATTCACTCATAGCAGGTGATTAGACGATCTTGA	1094	0.13355812769573164	No Hit
TCCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTG	879	0.10731041521439498	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAGTTT	20	7.032097E-4	45.000004	42
CGAGTTA	20	7.032097E-4	45.000004	36
ACGCATT	20	7.032097E-4	45.000004	12
CGTGAAT	20	7.032097E-4	45.000004	40
CACGCGG	40	6.8102963E-9	45.000004	37
CGCGAAT	20	7.032097E-4	45.000004	4
CCGTAAA	20	7.032097E-4	45.000004	30
GTCACGA	20	7.032097E-4	45.000004	40
CGTACAT	20	7.032097E-4	45.000004	26
CGGTCAG	20	7.032097E-4	45.000004	44
AGAATCG	20	7.032097E-4	45.000004	17
ATCGCGA	20	7.032097E-4	45.000004	20
TACACGA	20	7.032097E-4	45.000004	20
ACGAATT	20	7.032097E-4	45.000004	20
TACGTAT	25	3.8898215E-5	45.0	20
CAACGAC	30	2.1647356E-6	44.999996	12
CTATTAG	30	2.1647356E-6	44.999996	23
GCGATTC	295	0.0	42.711864	9
TAATGCG	80	0.0	42.187504	24
CGACAAT	70	0.0	41.785713	20