##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933162.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 819119 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.25400216574148 33.0 31.0 34.0 30.0 34.0 2 32.43429709236387 34.0 31.0 34.0 31.0 34.0 3 32.52288251157646 34.0 31.0 34.0 31.0 34.0 4 35.98121396280638 37.0 35.0 37.0 35.0 37.0 5 35.17682656610334 37.0 35.0 37.0 35.0 37.0 6 34.846806141720556 37.0 35.0 37.0 32.0 37.0 7 35.659390149660794 37.0 35.0 37.0 35.0 37.0 8 35.93905403244217 37.0 35.0 37.0 35.0 37.0 9 37.818194914292064 39.0 38.0 39.0 35.0 39.0 10 37.35475309448322 39.0 37.0 39.0 34.0 39.0 11 37.268236971673225 39.0 37.0 39.0 34.0 39.0 12 37.04329041323666 39.0 37.0 39.0 33.0 39.0 13 36.93785762508256 39.0 37.0 39.0 33.0 39.0 14 38.06148068839814 40.0 37.0 41.0 33.0 41.0 15 38.19992943638226 40.0 37.0 41.0 33.0 41.0 16 38.21393961072811 40.0 37.0 41.0 34.0 41.0 17 38.18214813720595 40.0 37.0 41.0 34.0 41.0 18 38.12654571557979 40.0 37.0 41.0 34.0 41.0 19 38.120791972839115 40.0 37.0 41.0 34.0 41.0 20 38.016080691572284 40.0 36.0 41.0 34.0 41.0 21 37.91330441608606 40.0 36.0 41.0 33.0 41.0 22 37.94347097308206 40.0 36.0 41.0 33.0 41.0 23 37.87100531180451 40.0 36.0 41.0 33.0 41.0 24 37.82713622806943 40.0 36.0 41.0 33.0 41.0 25 37.69380517360725 40.0 36.0 41.0 33.0 41.0 26 37.66166698611557 40.0 35.0 41.0 33.0 41.0 27 37.61491919977439 39.0 35.0 41.0 33.0 41.0 28 37.543649945856465 39.0 35.0 41.0 33.0 41.0 29 37.490454988835566 39.0 35.0 41.0 33.0 41.0 30 37.40735228947198 39.0 35.0 41.0 33.0 41.0 31 37.35705800988623 39.0 35.0 41.0 33.0 41.0 32 37.318210174590014 39.0 35.0 41.0 33.0 41.0 33 37.188744248393704 39.0 35.0 41.0 32.0 41.0 34 37.09408523059531 39.0 35.0 41.0 32.0 41.0 35 36.970745398409754 39.0 35.0 41.0 32.0 41.0 36 36.84629461653313 39.0 35.0 41.0 31.0 41.0 37 36.813528925589566 39.0 35.0 41.0 31.0 41.0 38 36.71368018566289 39.0 35.0 41.0 31.0 41.0 39 36.67118330791985 39.0 35.0 41.0 31.0 41.0 40 36.60610607249984 39.0 35.0 41.0 31.0 41.0 41 36.51635964981889 39.0 35.0 40.0 31.0 41.0 42 36.43591834641853 39.0 35.0 40.0 31.0 41.0 43 36.28561906145505 38.0 35.0 40.0 30.0 41.0 44 36.205883394232096 38.0 35.0 40.0 30.0 41.0 45 36.21324252031756 38.0 35.0 40.0 30.0 41.0 46 36.03013725722392 38.0 35.0 40.0 30.0 41.0 47 35.98498875010835 38.0 35.0 40.0 30.0 41.0 48 35.8872776727191 38.0 35.0 40.0 30.0 41.0 49 35.945995636775606 38.0 35.0 40.0 30.0 41.0 50 35.77667591644193 38.0 35.0 40.0 29.0 41.0 51 34.756887582878676 37.0 33.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 12.0 10 21.0 11 15.0 12 21.0 13 17.0 14 25.0 15 23.0 16 49.0 17 65.0 18 142.0 19 276.0 20 497.0 21 824.0 22 1233.0 23 1944.0 24 2715.0 25 4099.0 26 5700.0 27 7090.0 28 8325.0 29 10033.0 30 12703.0 31 16484.0 32 22066.0 33 31614.0 34 56216.0 35 75638.0 36 70391.0 37 104325.0 38 168352.0 39 218084.0 40 116.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.53719300858606 4.736918567387645 52.394096584256985 17.331791839769313 2 20.37603815806983 4.546836296069314 52.18374863725539 22.893376908605465 3 21.25564173215369 4.620207808633422 51.24774300193257 22.87640745728032 4 18.837678041896233 5.064099355527097 51.514859257324034 24.583363345252643 5 17.650793108205278 8.405372113209436 49.444586195656555 24.499248582928733 6 21.5554760663591 8.491440193671492 52.812594995354765 17.14048874461464 7 83.53609182548567 2.3126065931812105 9.521449264392597 4.629852316940518 8 85.61112610011487 3.2000234398176577 6.728692656378376 4.460157803689086 9 80.04954103127872 5.589908181839269 9.132861037285181 5.227689749596823 10 40.136903185007306 27.077506442897796 16.298120297539185 16.487470074555713 11 32.055049388428294 24.28035486907275 24.05486870650052 19.609727035998432 12 28.832318625254693 21.49956233465467 30.267397044873825 19.400721995216813 13 24.54710487731331 23.173067649511243 31.94541940792486 20.334408065250592 14 19.21149430058392 26.57049830366528 31.4533053194957 22.764702076255098 15 19.008959626134907 23.35265083583704 36.778538893616194 20.85985064441186 16 20.60909342842737 21.18153772528778 34.452503238235224 23.756865608049623 17 20.895498700433027 21.4324170236559 30.50533561057673 27.16674866533434 18 22.54446545617914 21.920014063890594 31.172882084288116 24.362638395642147 19 25.366155589114648 23.82596423718654 28.384398359701095 22.42348181399772 20 27.61015188269348 23.749296500264307 28.05819423063071 20.5823573864115 21 26.060560187225544 24.644648701836974 27.313980019997093 21.98081109094039 22 23.78958368686357 23.927780945137396 26.81686055383894 25.465774814160092 23 23.123380119372154 25.6003096009249 26.642038580474875 24.634271699228073 24 24.135320997315407 22.67851191340941 29.4047629221151 23.781404167160083 25 22.155266817153553 24.681639664078116 27.760069049796183 25.403024468972152 26 20.990112547749472 25.501056623030355 28.664211182990506 24.844619646229667 27 20.627039538821588 25.796862238575834 29.249474130132498 24.32662409247008 28 19.713741226854705 24.988066446999767 31.3348854073706 23.963306918774926 29 20.81211643241092 24.904806261361294 29.66760629407937 24.61547101214842 30 21.443770685333877 26.48162232837964 28.104097206877142 23.97050977940934 31 23.41186079189959 26.824429661624254 25.08976107256699 24.673948473909164 32 24.056577859871396 27.472320871570556 25.36542309481284 23.105678173745208 33 23.589368577703606 26.95652280071638 25.969852976185386 23.484255645394626 34 21.310212557638145 25.13896027317154 27.586345817884826 25.96448135130549 35 20.88219172061691 25.45417698771485 28.65700832235609 25.006622969312154 36 22.348401148062734 27.226569033315062 27.24341640225657 23.181613416365632 37 21.428876634530514 29.190752503604482 26.46514120658903 22.915229655275972 38 21.1383205614813 28.599141272513517 25.903928489022967 24.35860967698222 39 21.31656084158712 27.03465552624222 27.420680023293322 24.228103608877344 40 23.061362268486018 24.985991046477984 28.37426552185946 23.578381163176534 41 20.56978290089718 24.574451331247353 27.822819394984123 27.03294637287134 42 22.31092185628706 24.598379478439643 27.816593193418782 25.27410547185452 43 21.915497015696133 24.42819663565367 28.206524326746173 25.44978202190402 44 21.3701550080025 25.336245405124284 27.168946148239755 26.12465343863346 45 21.010134058665468 25.955447254916564 26.47698319780154 26.557435488616427 46 21.19582136417297 26.811488928959037 27.801943307382686 24.1907463994853 47 20.234544675437878 25.29901027811588 29.214924815564036 25.251520230882203 48 20.11380519802373 24.66235064746392 29.83986453738712 25.38397961712523 49 20.951778679288356 23.772492153154793 30.311835032516644 24.963894135040206 50 20.713107619283644 24.373259563018316 28.66994905502131 26.243683762676728 51 19.708369601974805 24.684691723668966 27.29762098059012 28.309317693766108 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 109.0 1 615.0 2 1121.0 3 2494.0 4 3867.0 5 2660.0 6 1453.0 7 1478.0 8 1503.0 9 1522.5 10 1542.0 11 1617.0 12 1692.0 13 1758.5 14 1825.0 15 1878.5 16 1932.0 17 1813.0 18 1694.0 19 1583.0 20 1472.0 21 1961.5 22 2451.0 23 2746.5 24 3042.0 25 3674.0 26 4944.0 27 5582.0 28 7268.5 29 8955.0 30 9730.0 31 10505.0 32 12322.0 33 14139.0 34 16956.0 35 19773.0 36 21105.5 37 22438.0 38 26071.5 39 29705.0 40 35293.0 41 40881.0 42 47670.0 43 54459.0 44 61721.0 45 68983.0 46 74700.5 47 80418.0 48 78335.0 49 76252.0 50 68566.0 51 60880.0 52 56122.0 53 51364.0 54 48035.5 55 44707.0 56 42022.0 57 39337.0 58 39579.0 59 39821.0 60 37018.5 61 34216.0 62 31060.5 63 27905.0 64 23650.5 65 19396.0 66 16852.0 67 14308.0 68 11901.5 69 9495.0 70 8031.0 71 6567.0 72 5731.0 73 4895.0 74 3979.5 75 2225.5 76 1387.0 77 1206.0 78 1025.0 79 717.5 80 410.0 81 278.5 82 147.0 83 103.0 84 59.0 85 39.5 86 20.0 87 13.5 88 7.0 89 5.0 90 3.0 91 1.5 92 0.0 93 1.5 94 3.0 95 3.5 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 819119.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.171554718032766 #Duplication Level Percentage of deduplicated Percentage of total 1 73.95766948663203 20.835025327608363 2 11.189110345282044 6.304292686764391 3 4.30154552056627 3.6354367501422424 4 1.9402721475036813 2.1864193188509957 5 1.0814430813099856 1.5232966469781108 6 0.7109751847705611 1.201756579255639 7 0.4774006997119805 0.9414383954054232 8 0.38307476615570935 0.8633449388682537 9 0.31115992572636514 0.7889272986293376 >10 4.181454804662001 31.20119962632823 >50 1.370918200026813 24.453686629552102 >100 0.09024853351602027 4.176141766991518 >500 0.002148774607524292 0.38790393174003657 >1k 0.0025785295290291508 1.5011301028853663 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGC 2650 0.3235183166304285 No Hit CTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGCT 2370 0.28933524921287385 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGC 2301 0.28091156474211926 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1998 0.2439206025009797 No Hit CCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGC 1986 0.24245561389737025 No Hit TTTCCTGGGGTTTTATCCATTCACTCATAGCAGGTGATTAGACGATCTTGA 1094 0.13355812769573164 No Hit TCCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTG 879 0.10731041521439498 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.4416476726824796E-4 0.0 0.0 0.3039851352489687 0.0 2 2.4416476726824796E-4 0.0 0.0 1.2299800151137992 0.0 3 2.4416476726824796E-4 0.0 0.0 1.749806804627899 0.0 4 2.4416476726824796E-4 0.0 0.0 2.324936913928257 0.0 5 2.4416476726824796E-4 0.0 0.0 3.231642777178896 0.0 6 2.4416476726824796E-4 0.0 0.0 3.8446184254058324 0.0 7 2.4416476726824796E-4 0.0 0.0 4.407418213959144 0.0 8 2.4416476726824796E-4 0.0 0.0 5.329872704698585 0.0 9 3.662471509023719E-4 0.0 0.0 5.870941828965022 0.0 10 3.662471509023719E-4 0.0 0.0 6.856268747276037 0.0 11 3.662471509023719E-4 0.0 0.0 8.272180232664606 0.0 12 4.883295345364959E-4 0.0 0.0 9.635596293090503 0.0 13 4.883295345364959E-4 0.0 0.0 10.050798479830158 0.0 14 4.883295345364959E-4 0.0 0.0 10.193879033449353 0.0 15 4.883295345364959E-4 0.0 0.0 10.425103068052383 0.0 16 4.883295345364959E-4 0.0 0.0 10.999134435900034 0.0 17 4.883295345364959E-4 0.0 0.0 11.851635720817121 0.0 18 4.883295345364959E-4 0.0 0.0 12.793501310554388 0.0 19 4.883295345364959E-4 0.0 0.0 13.35569068718953 0.0 20 4.883295345364959E-4 0.0 0.0 13.94986564833681 0.0 21 4.883295345364959E-4 0.0 0.0 14.753411897416616 0.0 22 4.883295345364959E-4 0.0 0.0 15.581618787990513 0.0 23 4.883295345364959E-4 0.0 0.0 16.36636434999066 0.0 24 4.883295345364959E-4 0.0 0.0 16.977020432928548 0.0 25 4.883295345364959E-4 0.0 0.0 17.524559923527594 0.0 26 4.883295345364959E-4 0.0 0.0 18.002390373071556 0.0 27 4.883295345364959E-4 0.0 0.0 18.455071851586887 0.0 28 6.104119181706199E-4 0.0 0.0 18.927774841018216 0.0 29 6.104119181706199E-4 0.0 0.0 19.450775772506802 0.0 30 6.104119181706199E-4 0.0 0.0 20.051176935219424 0.0 31 6.104119181706199E-4 0.0 0.0 20.57527660816072 0.0 32 6.104119181706199E-4 0.0 0.0 21.092539667618503 0.0 33 6.104119181706199E-4 0.0 0.0 21.633364627117672 0.0 34 6.104119181706199E-4 0.0 0.0 22.148796450820942 0.0 35 6.104119181706199E-4 0.0 0.0 22.746023471559077 0.0 36 6.104119181706199E-4 0.0 0.0 23.24985746881711 0.0 37 6.104119181706199E-4 0.0 0.0 23.766632198740353 0.0 38 6.104119181706199E-4 0.0 0.0 24.287679812090794 0.0 39 6.104119181706199E-4 0.0 0.0 24.77417811087278 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAGTTT 20 7.032097E-4 45.000004 42 CGAGTTA 20 7.032097E-4 45.000004 36 ACGCATT 20 7.032097E-4 45.000004 12 CGTGAAT 20 7.032097E-4 45.000004 40 CACGCGG 40 6.8102963E-9 45.000004 37 CGCGAAT 20 7.032097E-4 45.000004 4 CCGTAAA 20 7.032097E-4 45.000004 30 GTCACGA 20 7.032097E-4 45.000004 40 CGTACAT 20 7.032097E-4 45.000004 26 CGGTCAG 20 7.032097E-4 45.000004 44 AGAATCG 20 7.032097E-4 45.000004 17 ATCGCGA 20 7.032097E-4 45.000004 20 TACACGA 20 7.032097E-4 45.000004 20 ACGAATT 20 7.032097E-4 45.000004 20 TACGTAT 25 3.8898215E-5 45.0 20 CAACGAC 30 2.1647356E-6 44.999996 12 CTATTAG 30 2.1647356E-6 44.999996 23 GCGATTC 295 0.0 42.711864 9 TAATGCG 80 0.0 42.187504 24 CGACAAT 70 0.0 41.785713 20 >>END_MODULE