##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933161.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2317604 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.373136653198735 33.0 31.0 34.0 31.0 34.0 2 32.5776176603078 34.0 31.0 34.0 31.0 34.0 3 32.621480632584344 34.0 31.0 34.0 31.0 34.0 4 36.06592584410451 37.0 35.0 37.0 35.0 37.0 5 35.27258021646494 37.0 35.0 37.0 35.0 37.0 6 34.97276195588202 37.0 35.0 37.0 33.0 37.0 7 35.7239282465857 37.0 35.0 37.0 35.0 37.0 8 36.003846213589554 37.0 35.0 37.0 35.0 37.0 9 37.87648148691493 39.0 38.0 39.0 35.0 39.0 10 37.44969546134715 39.0 37.0 39.0 35.0 39.0 11 37.37707477204906 39.0 37.0 39.0 35.0 39.0 12 37.24059287091324 39.0 37.0 39.0 34.0 39.0 13 37.2190162771552 39.0 37.0 39.0 34.0 39.0 14 38.45097782019707 40.0 38.0 41.0 34.0 41.0 15 38.52602860540455 40.0 38.0 41.0 34.0 41.0 16 38.517063311937676 40.0 38.0 41.0 34.0 41.0 17 38.45338634210158 40.0 38.0 41.0 34.0 41.0 18 38.37842918807527 40.0 38.0 41.0 34.0 41.0 19 38.33872395801871 40.0 37.0 41.0 34.0 41.0 20 38.238181760128136 40.0 37.0 41.0 34.0 41.0 21 38.128937903110284 40.0 37.0 41.0 34.0 41.0 22 38.144393951684584 40.0 37.0 41.0 34.0 41.0 23 38.06762069792769 40.0 37.0 41.0 34.0 41.0 24 38.00170046306444 40.0 36.0 41.0 34.0 41.0 25 37.88892407848795 40.0 36.0 41.0 33.0 41.0 26 37.83234193589586 40.0 36.0 41.0 33.0 41.0 27 37.79223801822917 40.0 36.0 41.0 33.0 41.0 28 37.69332854102772 40.0 36.0 41.0 33.0 41.0 29 37.616709325665646 40.0 36.0 41.0 33.0 41.0 30 37.520958282778246 40.0 36.0 41.0 33.0 41.0 31 37.43414880195236 40.0 35.0 41.0 33.0 41.0 32 37.35389177788785 40.0 35.0 41.0 33.0 41.0 33 37.194906032264356 39.0 35.0 41.0 32.0 41.0 34 37.03298579049743 39.0 35.0 41.0 32.0 41.0 35 36.86659196307911 39.0 35.0 41.0 31.0 41.0 36 36.7362866995397 39.0 35.0 41.0 31.0 41.0 37 36.7161465030264 39.0 35.0 41.0 31.0 41.0 38 36.59991784618943 39.0 35.0 41.0 31.0 41.0 39 36.53583873690242 39.0 35.0 41.0 31.0 41.0 40 36.386829242614354 39.0 35.0 41.0 30.0 41.0 41 36.23641959540974 39.0 35.0 41.0 30.0 41.0 42 36.13387274098595 39.0 35.0 40.0 30.0 41.0 43 36.00354417752127 38.0 35.0 40.0 30.0 41.0 44 35.90035010295115 38.0 35.0 40.0 29.0 41.0 45 35.859736175809154 38.0 35.0 40.0 29.0 41.0 46 35.638366174721824 38.0 35.0 40.0 29.0 41.0 47 35.54236573633805 38.0 35.0 40.0 28.0 41.0 48 35.43817666866298 38.0 34.0 40.0 28.0 41.0 49 35.45945813003429 37.0 34.0 40.0 28.0 41.0 50 35.277152179578565 37.0 34.0 40.0 28.0 41.0 51 34.15318492719205 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 15.0 9 34.0 10 58.0 11 48.0 12 43.0 13 50.0 14 59.0 15 79.0 16 163.0 17 290.0 18 494.0 19 866.0 20 1617.0 21 2488.0 22 3954.0 23 5901.0 24 8976.0 25 13976.0 26 19976.0 27 24778.0 28 27564.0 29 30770.0 30 36616.0 31 45537.0 32 58949.0 33 82551.0 34 141353.0 35 181206.0 36 206944.0 37 301271.0 38 476232.0 39 644451.0 40 294.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.364951044268132 4.21538796101491 54.6193396283403 18.800321366376654 2 22.06485663642279 4.443770376647606 51.53020101794784 21.96117196898176 3 20.55877535592793 4.5305841722744695 52.14311849651623 22.76752197528137 4 18.573319687056113 4.764575829175303 51.170217172562694 25.491887311205886 5 17.71286207652386 7.747872371638986 49.666854216682395 24.872411335154755 6 22.198615466662986 7.341418119747808 52.7845568095326 17.675409604056604 7 83.59706835162521 2.1432479405454945 10.082524883457225 4.177158824372067 8 86.30011857073082 2.7295430970951036 7.609237816296485 3.3611005158776046 9 80.37632831148031 5.240196340703589 9.421540522021882 4.961934825794225 10 39.150907575237184 28.386644137652507 16.535611778371113 15.926836508739198 11 30.773980369381484 24.54491794111505 24.887038510461668 19.794063179041803 12 26.975963106725736 21.08759736348401 30.86049212894006 21.07594740085019 13 24.646488356078088 21.093336048781413 32.884435822513254 21.37573977262725 14 21.55057550815411 22.871034050683377 32.37766244794192 23.200727993220585 15 20.472436188408373 22.241461440349603 34.3512955621409 22.934806809101126 16 22.943004930954555 20.995648954696318 33.00270451725144 23.058641597097694 17 22.750176475359897 21.28184970340058 31.170553727038786 24.797420094200735 18 23.51299013981681 21.338761928267296 30.6042360990057 24.544011832910194 19 24.759924473723725 23.512774399768034 29.103203135652166 22.62409799085607 20 27.800348981102896 22.919144081560095 27.86084249077927 21.419664446557736 21 27.345568958286233 23.51104847937784 27.039304385045938 22.104078177289992 22 25.599757335593136 22.9724318736074 26.767773959658335 24.660036831141127 23 24.86990875058897 24.477952229975443 26.70115343259677 23.950985586838822 24 24.16055547021838 22.749960735311124 28.870505919043975 24.218977875426518 25 24.89402848804196 23.802858469350245 26.78317779914084 24.519935243466957 26 23.72536464383044 24.64096541082946 26.92392660696133 24.70974333837877 27 23.19119228306475 23.884278763757745 28.50694078884917 24.417588164328333 28 22.457848709270436 24.941189262704068 29.22073831422452 23.380223713800977 29 23.450080341594166 23.465613625105927 28.257415848436573 24.82689018486333 30 24.316794413540883 23.244480075112055 28.694246299195203 23.744479212151862 31 24.235115231074854 24.98554541673211 26.99632896733005 23.783010384862987 32 24.87405095952544 24.333708433364805 27.483426849453142 23.308813757656615 33 25.16193448061015 24.154428452833184 26.415945088116864 24.267691978439803 34 24.07939406386941 24.201804967544067 27.836852197355544 23.88194877123098 35 24.31843403791157 24.047766572719066 27.424831852205983 24.20896753716338 36 23.239388609960976 26.043275727863772 27.030415895036423 23.68691976713882 37 24.492579405282353 25.26372063562196 27.639363756707358 22.60433620238833 38 23.982095301872107 24.343848215657204 27.995680021263343 23.67837646120735 39 24.6985248558425 23.453489034364804 26.85437201523643 24.993614094556275 40 24.97790821900549 23.269807956838182 28.794090793768046 22.95819303038828 41 21.905424740378425 24.34963004896436 29.085037823545353 24.65990738711186 42 22.398951675954994 24.786762535791272 27.906924565197507 24.907361223056228 43 22.57469351968671 23.676132764700096 28.648509408855006 25.100664306758187 44 23.286376792584065 24.157233073467253 27.943470929459906 24.612919204488772 45 23.650977475012986 23.210910923522743 27.189286866953978 25.948824734510296 46 23.041770725283524 24.388765293812057 27.78347810928873 24.785985871615686 47 22.48956249644029 24.59604833267461 29.619425924359817 23.294963246525292 48 22.70504365715627 22.81796199868485 29.474146575515057 25.00284776864382 49 22.526756080849015 23.829739679427547 29.013498423371725 24.630005816351716 50 22.165434647161465 23.1264702684324 29.220134242087948 25.487960842318184 51 21.682090641887054 22.95094416474946 28.435013056587756 26.931952136775738 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 332.0 1 1696.5 2 3061.0 3 14056.0 4 25051.0 5 16596.0 6 8141.0 7 7800.0 8 7459.0 9 7426.0 10 7393.0 11 7294.0 12 7195.0 13 6804.0 14 6413.0 15 6271.5 16 6130.0 17 5854.0 18 5578.0 19 5722.5 20 5867.0 21 6022.5 22 6178.0 23 6951.0 24 7724.0 25 9168.5 26 13377.0 27 16141.0 28 18361.5 29 20582.0 30 24918.0 31 29254.0 32 34152.5 33 39051.0 34 46922.5 35 54794.0 36 57835.5 37 60877.0 38 68233.5 39 75590.0 40 83411.5 41 91233.0 42 99608.0 43 107983.0 44 120221.5 45 132460.0 46 146665.5 47 160871.0 48 176161.5 49 191452.0 50 191151.0 51 190850.0 52 177983.0 53 165116.0 54 154197.0 55 143278.0 56 138457.0 57 133636.0 58 133914.5 59 134193.0 60 128804.0 61 123415.0 62 111792.0 63 100169.0 64 87109.0 65 74049.0 66 63584.5 67 53120.0 68 45673.5 69 38227.0 70 32368.5 71 26510.0 72 23277.5 73 20045.0 74 16236.5 75 10105.0 76 7782.0 77 5711.0 78 3640.0 79 2905.0 80 2170.0 81 1556.5 82 943.0 83 646.5 84 350.0 85 251.5 86 153.0 87 113.5 88 74.0 89 46.0 90 18.0 91 15.0 92 12.0 93 7.0 94 2.0 95 1.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2317604.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.721183065567526 #Duplication Level Percentage of deduplicated Percentage of total 1 74.09195898754022 19.057328408050434 2 9.58690598617397 4.931731278055317 3 3.4678515782564956 2.6759173586565774 4 1.713697322298394 1.7631329018323945 5 1.008911632583593 1.29752003993316 6 0.7025295918540726 1.0841935344634221 7 0.5326186774395686 0.9589707754594522 8 0.4542111641201851 0.9346278802207854 9 0.3775363855146538 0.8739614237161577 >10 7.101931472975405 46.90693850070341 >50 0.873957988040932 13.693402230730722 >100 0.08082380353913984 3.556182545815128 >500 0.005342139013849098 0.9004977579252026 >1k 0.001550943584665867 0.7331282199292602 >5k 0.0 0.0 >10k+ 1.7232706496287414E-4 0.6324671445085015 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14269 0.6156789511926973 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2727 0.11766462260161788 No Hit CCTGTCTCTTATACACATCTGACGCATTGCGTCTCGTATGCCGTCTTCTGC 2455 0.10592836394828452 TruSeq Adapter, Index 14 (96% over 25bp) CTGTCTCTTATACACATCTGACGCATTGCGTCTCGTATGCCGTCTTCTGCT 2321 0.10014653064112766 Illumina PCR Primer Index 3 (95% over 24bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.7259203901960819E-4 0.0 0.0 0.10825835647504924 0.0 2 1.7259203901960819E-4 0.0 0.0 0.40869794839843215 0.0 3 1.7259203901960819E-4 0.0 0.0 0.6649971263425504 0.0 4 1.7259203901960819E-4 0.0 0.0 0.9775613090070607 0.0 5 1.7259203901960819E-4 0.0 0.0 1.548711514132699 0.0 6 1.7259203901960819E-4 0.0 0.0 2.2732960419467694 0.0 7 1.7259203901960819E-4 0.0 0.0 2.8368953453652996 0.0 8 1.7259203901960819E-4 0.0 0.0 3.6589080792059385 0.0 9 1.7259203901960819E-4 0.0 0.0 4.231525316663244 0.0 10 1.7259203901960819E-4 0.0 0.0 5.0241974038705495 0.0 11 1.7259203901960819E-4 0.0 0.0 6.180607213311679 0.0 12 1.7259203901960819E-4 0.0 0.0 7.168394600630651 0.0 13 1.7259203901960819E-4 0.0 0.0 7.496405770787416 0.0 14 1.7259203901960819E-4 0.0 0.0 7.624167027671682 0.0 15 1.7259203901960819E-4 0.0 0.0 7.7841166998331035 0.0 16 1.7259203901960819E-4 0.0 0.0 8.130854106223497 0.0 17 1.7259203901960819E-4 0.0 0.0 8.595256135215507 0.0 18 1.7259203901960819E-4 0.0 0.0 9.099828961289331 0.0 19 1.7259203901960819E-4 0.0 0.0 9.451657832830803 0.0 20 1.7259203901960819E-4 0.0 0.0 9.83796196416644 0.0 21 1.7259203901960819E-4 0.0 0.0 10.370322108522423 0.0 22 1.7259203901960819E-4 0.0 0.0 10.946089150691835 0.0 23 2.1574004877451022E-4 0.0 0.0 11.483885944276935 0.0 24 2.1574004877451022E-4 0.0 0.0 11.930036365142621 0.0 25 2.1574004877451022E-4 0.0 0.0 12.33174433596076 0.0 26 2.1574004877451022E-4 0.0 0.0 12.678999518468212 0.0 27 2.1574004877451022E-4 0.0 0.0 13.033330974575467 0.0 28 2.1574004877451022E-4 0.0 0.0 13.387446690633947 0.0 29 2.1574004877451022E-4 0.0 0.0 13.778195066974341 0.0 30 2.1574004877451022E-4 0.0 0.0 14.234528418142185 0.0 31 2.1574004877451022E-4 0.0 0.0 14.639860821779735 0.0 32 2.1574004877451022E-4 0.0 0.0 15.058223924363265 0.0 33 2.1574004877451022E-4 0.0 0.0 15.454063765854736 0.0 34 2.5888805852941225E-4 0.0 0.0 15.838641976800178 0.0 35 2.5888805852941225E-4 0.0 0.0 16.273703359158855 0.0 36 2.5888805852941225E-4 0.0 0.0 16.68779480877665 0.0 37 2.5888805852941225E-4 0.0 0.0 17.09981515392621 0.0 38 2.5888805852941225E-4 0.0 0.0 17.523312869670573 0.0 39 2.5888805852941225E-4 0.0 0.0 17.94314300458577 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 7060 0.0 41.334988 1 TTAAACG 35 6.251037E-6 38.57143 45 TTGGGAC 5090 0.0 38.54617 5 TATGGGC 455 0.0 38.076923 4 CGAATAT 355 0.0 38.02817 14 TTTGGGA 11705 0.0 37.637764 4 TCGACGT 30 1.1402799E-4 37.500004 26 ACGGTAC 30 1.1402799E-4 37.500004 13 TCGTTTG 915 0.0 37.37705 1 TTTGGGC 6180 0.0 37.208736 4 TGGGCGA 4000 0.0 36.3375 6 ACACGAC 1105 0.0 36.244347 26 TACGAAT 375 0.0 36.0 12 TCGGTAT 25 0.00210755 36.0 25 TCAAGCG 1135 0.0 35.68282 17 CGTTTGG 1615 0.0 35.665634 2 TTTGTCG 570 0.0 35.526318 1 GGGCGAT 6415 0.0 35.424786 7 TCGTTCA 395 0.0 35.316456 16 CACGACC 1135 0.0 35.286343 27 >>END_MODULE