##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933159.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 404471 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.0099117118409 33.0 31.0 34.0 30.0 34.0 2 32.19989319382601 34.0 31.0 34.0 30.0 34.0 3 32.27910777286876 34.0 31.0 34.0 30.0 34.0 4 35.8143674082938 37.0 35.0 37.0 35.0 37.0 5 35.03634871226862 37.0 35.0 37.0 33.0 37.0 6 34.76908604077919 37.0 35.0 37.0 32.0 37.0 7 35.581779657874115 37.0 35.0 37.0 33.0 37.0 8 35.84746496040507 37.0 35.0 37.0 35.0 37.0 9 37.68271396466001 39.0 37.0 39.0 35.0 39.0 10 37.17803006890482 39.0 37.0 39.0 34.0 39.0 11 37.07383718486616 39.0 37.0 39.0 33.0 39.0 12 36.69754815549199 39.0 35.0 39.0 33.0 39.0 13 36.46124196790375 39.0 35.0 39.0 32.0 39.0 14 37.39320742401804 39.0 36.0 41.0 33.0 41.0 15 37.565956520986674 39.0 36.0 41.0 33.0 41.0 16 37.6660353894346 39.0 36.0 41.0 33.0 41.0 17 37.646229272308766 39.0 35.0 41.0 33.0 41.0 18 37.64833325504177 39.0 36.0 41.0 33.0 41.0 19 37.658709771528734 39.0 36.0 41.0 33.0 41.0 20 37.55718209710956 39.0 35.0 41.0 33.0 41.0 21 37.409796994098464 39.0 35.0 41.0 33.0 41.0 22 37.48133982411594 39.0 35.0 41.0 33.0 41.0 23 37.44162869525874 39.0 35.0 41.0 33.0 41.0 24 37.42447295356157 39.0 35.0 41.0 33.0 41.0 25 37.28093237834109 39.0 35.0 41.0 33.0 41.0 26 37.225247298323 39.0 35.0 41.0 33.0 41.0 27 37.17045474211995 39.0 35.0 41.0 32.0 41.0 28 37.09471136373189 39.0 35.0 40.0 32.0 41.0 29 37.05555404466575 39.0 35.0 40.0 32.0 41.0 30 36.97136506696401 39.0 35.0 40.0 32.0 41.0 31 36.84379102580902 39.0 35.0 40.0 32.0 41.0 32 36.83878201403809 39.0 35.0 40.0 32.0 41.0 33 36.73659669049203 38.0 35.0 40.0 31.0 41.0 34 36.61571781413253 38.0 35.0 40.0 31.0 41.0 35 36.53146702730233 38.0 35.0 40.0 31.0 41.0 36 36.36619436251301 38.0 35.0 40.0 30.0 41.0 37 36.32198600146859 38.0 35.0 40.0 30.0 41.0 38 36.233050082700615 38.0 35.0 40.0 30.0 41.0 39 36.248710043488906 38.0 35.0 40.0 30.0 41.0 40 36.105028543455525 38.0 35.0 40.0 30.0 41.0 41 36.03641546612736 38.0 35.0 40.0 30.0 41.0 42 35.992041456618644 38.0 35.0 40.0 30.0 41.0 43 35.856016871419705 38.0 35.0 40.0 30.0 41.0 44 35.757453562801786 38.0 35.0 40.0 30.0 41.0 45 35.76756059148864 38.0 35.0 40.0 30.0 41.0 46 35.526035241092686 37.0 34.0 40.0 29.0 41.0 47 35.45119674834537 37.0 34.0 40.0 29.0 41.0 48 35.432330129972236 37.0 34.0 40.0 29.0 41.0 49 35.544479085027106 37.0 34.0 40.0 29.0 41.0 50 35.32432238652462 37.0 34.0 40.0 28.0 41.0 51 34.207354791814495 36.0 33.0 39.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 5.0 10 5.0 11 7.0 12 7.0 13 5.0 14 9.0 15 7.0 16 17.0 17 28.0 18 79.0 19 147.0 20 216.0 21 414.0 22 648.0 23 1019.0 24 1450.0 25 2266.0 26 3188.0 27 3984.0 28 4833.0 29 5970.0 30 7679.0 31 10007.0 32 13478.0 33 19298.0 34 33743.0 35 43812.0 36 36203.0 37 51521.0 38 82471.0 39 81918.0 40 34.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.607202988594977 4.538273448529067 53.4201463145689 17.434377248307047 2 19.53984340039212 4.4861065441032855 52.691787544718906 23.282262510785692 3 20.15645126597457 4.553107639361042 52.29843425115769 22.992006843506704 4 19.257499301556848 4.919759389424706 51.384153622880255 24.43858768613819 5 16.575724835649527 8.403569106314174 50.79770861198949 24.22299744604681 6 20.282294651532496 7.118680943751221 54.510212104205245 18.088812300511037 7 81.55343646392448 1.7402978211046034 10.94936348959505 5.756902225375861 8 82.54856343223618 2.4778043419676563 8.690363462399036 6.283268763397129 9 76.12659498456009 5.725008715087114 11.727664035246036 6.4207322651067695 10 40.61576726143531 25.765753292572274 18.727671452341454 14.890807993650967 11 32.85278796254861 24.195059719979923 24.11816916416752 18.833983153303947 12 30.15543759626772 20.24496193793869 31.444034306538665 18.155566159254928 13 23.496369331793872 27.787159029942814 31.052164432060643 17.664307206202672 14 17.996593080838924 29.9620986424243 31.082327286752324 20.95898098998445 15 15.673064323523814 24.236595454309455 40.06344088945808 20.026899332708652 16 17.54093618578341 22.482452388428342 36.22707190379533 23.749539521992922 17 17.592608617181455 20.843768774522772 29.786807954093124 31.77681465420265 18 20.925356824098635 21.805518813462523 33.40066407727625 23.868460285162595 19 23.242210195539357 24.132756118485627 30.132444600478152 22.49258908549686 20 26.660007763226535 24.04251479092444 28.477443376657412 20.82003406919161 21 23.142573880451256 26.09630851161146 29.174155872732534 21.58696173520475 22 20.285755962726622 24.63167940346774 28.28311547675853 26.799449157047107 23 19.543799184613977 26.019417955799057 27.367598665911768 27.069184193675195 24 21.80972183419825 22.056216638522912 31.200259103866536 24.93380242341231 25 19.28444808156827 25.09178655577285 28.49227756748939 27.131487795169495 26 18.459667071310427 28.132301203300113 28.17532035671284 25.23271136867662 27 21.327363395645175 26.66495249350386 29.32225054453842 22.68543356631254 28 16.624924901908912 25.587001293046967 33.8728858187608 23.915187986283318 29 18.3147864741848 24.15698529684452 30.609116599212307 26.919111629758376 30 21.41562683109543 25.198098256735342 28.755584454756956 24.630690457412275 31 22.76084070304175 28.254436041150043 24.5725898766537 24.4121333791545 32 22.450558878139596 27.3915806077568 23.64866702433549 26.50919348976812 33 22.59247263709883 25.208976663345457 24.070205280477463 28.128345419078254 34 19.057732198352912 24.932813477356845 27.82127766885636 28.18817665543389 35 18.647566821848784 24.676429212477533 26.102983897485853 30.57302006818783 36 23.45112504975635 25.320727567613005 25.617164147738652 25.610983234891993 37 20.497884891623876 26.29088364802421 28.48931072932299 24.721920731028924 38 17.3218846344979 26.090869308306402 26.631081091104182 29.956164966091514 39 20.50727987915079 23.749539521992922 26.619460974952467 29.123719623903817 40 21.856944008346705 23.755473198325713 26.54529002079259 27.84229277253499 41 17.6237604179286 25.187467086639092 24.896964182846236 32.29180831258607 42 20.80421093230417 22.85998254510212 25.778609591293318 30.55719693130039 43 22.94527914238598 21.29868396003669 26.98364035987747 28.772396537699862 44 19.973743482227402 23.24814387187215 27.93550093826257 28.84261170763788 45 19.687196362656408 24.31595837526053 24.92514914542699 31.071696116656078 46 21.956827559948675 25.27103302832589 27.361912226092848 25.41022718563259 47 18.027744881586074 24.190362226216465 30.048384185763627 27.733508706433835 48 18.711848315454013 22.196399741885077 28.878708238662355 30.213043703998554 49 20.107745672742915 19.12770013177706 31.621055650466907 29.143498545013113 50 20.022696311972922 21.179021487325418 29.094298478753732 29.703983721947928 51 17.86654667454527 21.42428010908075 25.75339146687896 34.95578174949502 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 50.0 1 157.0 2 264.0 3 993.5 4 1723.0 5 1149.5 6 576.0 7 614.5 8 653.0 9 740.0 10 827.0 11 796.0 12 765.0 13 804.5 14 844.0 15 790.5 16 737.0 17 769.5 18 802.0 19 755.5 20 709.0 21 1046.0 22 1383.0 23 1359.5 24 1336.0 25 1837.5 26 2092.5 27 1846.0 28 2038.0 29 2230.0 30 3207.5 31 4185.0 32 4754.5 33 5324.0 34 6668.0 35 8012.0 36 8678.5 37 9345.0 38 10389.5 39 11434.0 40 14676.5 41 17919.0 42 20123.5 43 22328.0 44 24369.5 45 26411.0 46 30032.5 47 33654.0 48 38368.5 49 43083.0 50 48459.5 51 53836.0 52 50183.5 53 46531.0 54 38274.0 55 30017.0 56 25487.0 57 20957.0 58 18233.5 59 15510.0 60 13607.5 61 11705.0 62 10873.5 63 10042.0 64 8132.0 65 6222.0 66 5040.5 67 3859.0 68 3401.0 69 2943.0 70 2270.5 71 1598.0 72 1360.5 73 1123.0 74 874.0 75 472.5 76 320.0 77 256.5 78 193.0 79 168.5 80 144.0 81 100.0 82 56.0 83 30.5 84 5.0 85 3.5 86 2.0 87 2.5 88 3.0 89 2.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 404471.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.17184516251223 #Duplication Level Percentage of deduplicated Percentage of total 1 72.25414896020808 23.968034416571165 2 11.887564614233822 7.886649054854473 3 4.894519315062959 4.870807105925816 4 2.5042634935791326 3.322841634205557 5 1.4356714244272308 2.381193509767174 6 0.9009334950623206 1.793137583995696 7 0.6457622487627833 1.4994787729428325 8 0.49657879074407635 1.3177947806040047 9 0.34534389580993174 1.0310124815663229 >10 4.0142220728737685 33.55892222535698 >50 0.5439235082328787 11.201867401037708 >100 0.07113985938740648 3.93331315084495 >500 0.0022231206058564526 0.4788509479311269 >1k 0.0037052010097607547 2.756096934396199 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTGC 2810 0.6947346039641903 RNA PCR Primer, Index 16 (96% over 25bp) CTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTGCT 2803 0.6930039483671264 RNA PCR Primer, Index 16 (96% over 26bp) TCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTGC 2319 0.5733414756558567 Illumina PCR Primer Index 7 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTGC 2245 0.5550459736297534 Illumina PCR Primer Index 7 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1035 0.25588979185157895 No Hit TCCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTG 857 0.2118816923833847 RNA PCR Primer, Index 16 (95% over 24bp) GCCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTG 573 0.1416665224453669 Illumina PCR Primer Index 7 (95% over 21bp) TGCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTG 518 0.1280685141827226 Illumina PCR Primer Index 7 (95% over 21bp) GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 486 0.12015694573900229 No Hit CGCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTG 465 0.11496497894781085 RNA PCR Primer, Index 16 (95% over 24bp) TTCCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCT 439 0.10853682958728808 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.472365138662599E-4 0.0 0.0 0.7461597988483724 0.0 2 2.472365138662599E-4 0.0 0.0 2.783883146134086 0.0 3 2.472365138662599E-4 0.0 0.0 3.8628232926464445 0.0 4 2.472365138662599E-4 0.0 0.0 4.872042742248517 0.0 5 2.472365138662599E-4 0.0 0.0 6.63483908611495 0.0 6 2.472365138662599E-4 0.0 0.0 7.7194656724462325 0.0 7 2.472365138662599E-4 0.0 0.0 8.800878184097252 0.0 8 2.472365138662599E-4 0.0 0.0 10.638339955151297 0.0 9 2.472365138662599E-4 0.0 0.0 11.690331321652232 0.0 10 2.472365138662599E-4 0.0 0.0 13.410108512105936 0.0 11 2.472365138662599E-4 0.0 0.0 16.066417617085033 0.0 12 2.472365138662599E-4 0.0 0.0 18.44779971864485 0.0 13 2.472365138662599E-4 0.0 0.0 19.236484197878216 0.0 14 2.472365138662599E-4 0.0 0.0 19.501027267715113 0.0 15 2.472365138662599E-4 0.0 0.0 19.953222851576502 0.0 16 2.472365138662599E-4 0.0 0.0 20.919423147765848 0.0 17 4.944730277325198E-4 0.0 0.0 22.48591369962247 0.0 18 4.944730277325198E-4 0.0 0.0 24.317936267371454 0.0 19 4.944730277325198E-4 0.0 0.0 25.254220945382983 0.0 20 4.944730277325198E-4 0.0 0.0 26.287916809857816 0.0 21 4.944730277325198E-4 0.0 0.0 27.53621396836856 0.0 22 4.944730277325198E-4 0.0 0.0 28.711823591802627 0.0 23 4.944730277325198E-4 0.0 0.0 29.850100501642885 0.0 24 4.944730277325198E-4 0.0 0.0 30.73891576899209 0.0 25 4.944730277325198E-4 0.0 0.0 31.481614256646335 0.0 26 4.944730277325198E-4 0.0 0.0 32.153108628307095 0.0 27 4.944730277325198E-4 0.0 0.0 32.784797921235395 0.0 28 4.944730277325198E-4 0.0 0.0 33.475823977491586 0.0 29 4.944730277325198E-4 0.0 0.0 34.20195761871679 0.0 30 4.944730277325198E-4 0.0 0.0 35.11228246277236 0.0 31 7.417095415987796E-4 0.0 0.0 35.87747947318844 0.0 32 7.417095415987796E-4 0.0 0.0 36.57196684063876 0.0 33 7.417095415987796E-4 0.0 0.0 37.19871140328973 0.0 34 7.417095415987796E-4 0.0 0.0 37.90061586615604 0.0 35 7.417095415987796E-4 0.0 0.0 38.69127823750034 0.0 36 7.417095415987796E-4 0.0 0.0 39.35065801998166 0.0 37 7.417095415987796E-4 0.0 0.0 40.004598599157916 0.0 38 7.417095415987796E-4 0.0 0.0 40.673620605680014 0.0 39 7.417095415987796E-4 0.0 0.0 41.44425681940115 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTATGC 20 7.027858E-4 45.000004 14 TTGGCGA 20 7.027858E-4 45.000004 5 TCGCACT 20 7.027858E-4 45.000004 33 CCCTCGC 20 7.027858E-4 45.000004 44 CCCTCAT 20 7.027858E-4 45.000004 27 CTCAAAT 20 7.027858E-4 45.000004 11 TTTCGAG 20 7.027858E-4 45.000004 1 CGTGAGA 20 7.027858E-4 45.000004 42 GACCGTG 20 7.027858E-4 45.000004 39 CGTGACA 20 7.027858E-4 45.000004 33 GACCGGT 20 7.027858E-4 45.000004 10 CGACCGT 20 7.027858E-4 45.000004 38 GGATCGA 20 7.027858E-4 45.000004 8 ATAGATT 20 7.027858E-4 45.000004 11 ATTCGGA 20 7.027858E-4 45.000004 26 TGAGTAG 20 7.027858E-4 45.000004 28 TAACGGG 20 7.027858E-4 45.000004 3 TAACGCA 20 7.027858E-4 45.000004 10 GCGTTAG 20 7.027858E-4 45.000004 1 ACGGGAT 20 7.027858E-4 45.000004 5 >>END_MODULE