##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933156.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1368303 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.20884409374239 33.0 31.0 34.0 30.0 34.0 2 32.402236931439894 34.0 31.0 34.0 30.0 34.0 3 32.478491971442 34.0 31.0 34.0 30.0 34.0 4 35.94438439439218 37.0 35.0 37.0 35.0 37.0 5 35.152579509070726 37.0 35.0 37.0 35.0 37.0 6 34.831144125241266 37.0 35.0 37.0 32.0 37.0 7 35.61639636834824 37.0 35.0 37.0 33.0 37.0 8 35.899097641384984 37.0 35.0 37.0 35.0 37.0 9 37.76101784473176 39.0 38.0 39.0 35.0 39.0 10 37.274463331586645 39.0 37.0 39.0 34.0 39.0 11 37.216888364638535 39.0 37.0 39.0 34.0 39.0 12 37.066046774727525 39.0 37.0 39.0 33.0 39.0 13 37.002060216194806 39.0 37.0 39.0 33.0 39.0 14 38.18070632016447 40.0 37.0 41.0 33.0 41.0 15 38.26597398383253 40.0 37.0 41.0 33.0 41.0 16 38.26024060460293 40.0 37.0 41.0 34.0 41.0 17 38.212517987609466 40.0 37.0 41.0 34.0 41.0 18 38.17292003306285 40.0 37.0 41.0 34.0 41.0 19 38.163308857760306 40.0 37.0 41.0 34.0 41.0 20 38.08779122752782 40.0 37.0 41.0 34.0 41.0 21 37.948376200300665 40.0 36.0 41.0 33.0 41.0 22 37.97953742701726 40.0 37.0 41.0 33.0 41.0 23 37.90964135867567 40.0 36.0 41.0 33.0 41.0 24 37.82533181612552 40.0 36.0 41.0 33.0 41.0 25 37.70952632567494 40.0 36.0 41.0 33.0 41.0 26 37.65513267163779 40.0 36.0 41.0 33.0 41.0 27 37.60522413529752 40.0 36.0 41.0 33.0 41.0 28 37.52399139664241 40.0 36.0 41.0 33.0 41.0 29 37.460369523416965 39.0 36.0 41.0 33.0 41.0 30 37.37575010798047 39.0 36.0 41.0 32.0 41.0 31 37.32753344836633 39.0 35.0 41.0 32.0 41.0 32 37.32020539310372 39.0 35.0 41.0 32.0 41.0 33 37.21672831236941 39.0 35.0 41.0 32.0 41.0 34 37.11096080327238 39.0 35.0 41.0 32.0 41.0 35 36.9732639627334 39.0 35.0 41.0 31.0 41.0 36 36.82642660287963 39.0 35.0 41.0 31.0 41.0 37 36.785999153696224 39.0 35.0 41.0 31.0 41.0 38 36.680067207336386 39.0 35.0 41.0 31.0 41.0 39 36.630806188395404 39.0 35.0 41.0 31.0 41.0 40 36.52030873278799 39.0 35.0 41.0 30.0 41.0 41 36.41065465763066 39.0 35.0 41.0 30.0 41.0 42 36.314458128060814 39.0 35.0 40.0 30.0 41.0 43 36.1555956538866 38.0 35.0 40.0 30.0 41.0 44 36.0697659801959 38.0 35.0 40.0 30.0 41.0 45 36.0566972373809 38.0 35.0 40.0 30.0 41.0 46 35.85007341210244 38.0 35.0 40.0 29.0 41.0 47 35.773884147005454 38.0 35.0 40.0 29.0 41.0 48 35.67843891301853 38.0 35.0 40.0 29.0 41.0 49 35.72114728974503 38.0 35.0 40.0 29.0 41.0 50 35.52728452689207 37.0 34.0 40.0 29.0 41.0 51 34.49816086056963 36.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 10.0 9 25.0 10 22.0 11 27.0 12 34.0 13 25.0 14 35.0 15 55.0 16 100.0 17 158.0 18 317.0 19 550.0 20 953.0 21 1518.0 22 2384.0 23 3422.0 24 5070.0 25 7260.0 26 10172.0 27 12617.0 28 15242.0 29 18299.0 30 22999.0 31 29210.0 32 37733.0 33 52914.0 34 88563.0 35 113017.0 36 122021.0 37 179593.0 38 280351.0 39 363444.0 40 161.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.82169519470468 4.509746744690321 53.06412395500119 17.604434105603804 2 21.00039245693388 4.684707992308721 53.15767048672699 21.157229064030407 3 21.673342819536316 4.608482185597781 51.62811160978234 22.090063385083567 4 18.930967775412316 5.0777495920128795 51.34644884941421 24.644833783160603 5 17.77610660796622 8.129997522478574 49.49437368769929 24.59952218185592 6 22.02553089483835 7.765312215203796 52.74146150377511 17.46769538618274 7 84.55656386048996 2.3926717985709307 8.707501189429534 4.3432631515095705 8 86.57475719924608 2.8533884673204692 6.585018084444746 3.986836248988711 9 81.05127300020536 5.526480611385051 8.47385410979878 4.948392278610805 10 39.2267648320584 27.687580893997893 16.245597649058723 16.840056624884987 11 30.22817314586024 24.384657491798233 24.167307971991583 21.219861390349944 12 27.437490088087213 20.723260856696214 30.639339386086267 21.1999096691303 13 23.90070035657307 22.98832933933493 31.3611093449331 21.7498609591589 14 21.002877286682846 24.969688731224004 30.76643111942311 23.26100286267004 15 19.707038572596858 22.994833746618987 34.55280007425256 22.745327606531593 16 21.641405448939306 21.30120302301464 32.09442645378984 24.962965074256214 17 21.103951390883452 21.942216015020065 29.74311976221641 27.210712831880073 18 22.632706352321087 21.624377056836096 30.740998156110162 25.001918434732655 19 24.29578828665873 23.867447487873665 27.56794364990795 24.26882057555965 20 27.898133673608843 22.098175623381664 28.185862341893568 21.817828361115925 21 26.488212040754135 24.03729290953831 27.077482107398726 22.39701294230883 22 25.01149233758897 23.543031039177727 25.954485227321726 25.49099139591158 23 24.631898051820393 24.521907793814673 25.808172605044348 25.038021549320582 24 23.62817299969378 22.479012324024723 29.22751758930588 24.665297086975617 25 23.79370651091169 23.79816458781425 26.83214171130225 25.575987189971812 26 22.70250083497588 25.05570769047499 26.28394441874351 25.957847055805622 27 22.29944683304794 24.967203901475038 27.15275783214683 25.58059143333019 28 21.207583408060934 25.004695597393265 28.99657458910782 24.791146405437978 29 21.911813392209183 22.873881004426654 28.522629856106434 26.691675747257737 30 22.20114989150795 24.108475973523408 28.54046216371666 25.14991197125198 31 22.845743961681002 25.464023684812503 26.39905050270298 25.29118185080351 32 22.931105171880787 25.236515596326253 25.864885189903113 25.967494041889843 33 22.652292657401173 25.139168736749095 25.899234307021178 26.30930429882855 34 21.738313809148995 23.166286999297668 28.144789567807717 26.95060962374562 35 21.851008146587414 23.512701499594755 27.062426962449106 27.573863391368725 36 22.172793599078567 25.767026747730583 26.08545037173784 25.974729281453012 37 21.891569338077897 26.072222307485987 27.261578758505973 24.774629595930143 38 20.814395641900955 25.338028199894318 28.003373521800363 25.84420263640436 39 21.548224333353065 23.734582179531873 29.000301833731275 25.71689165338379 40 22.60106131463572 23.11827131856029 30.487545521715585 23.793121845088404 41 20.228048904372788 23.75321840264912 29.495879202194253 26.522853490783838 42 20.782604437759765 23.954781945227044 27.50377657580229 27.7588370412109 43 21.625400222026848 23.38926392765345 27.724195591181193 27.26114025913851 44 21.493119579508342 23.539011461642634 27.669675503159752 27.298193455689272 45 21.6745852344108 23.297471393397515 27.188422447367287 27.839520924824402 46 21.62481555620356 24.414767781697474 28.429594906976014 25.53082175512295 47 19.941124151595076 24.538716936234152 29.735372940057868 25.7847859721129 48 19.87527616324747 22.723402638158362 30.080910441620023 27.32041075697415 49 20.468419640971337 23.678381177268484 29.694373249199923 26.15882593256026 50 20.34666298327198 22.88403957310625 29.714544220103296 27.054753223518475 51 19.491223800576336 23.48975336603077 28.37258998920561 28.646432844187288 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 264.0 1 975.5 2 1687.0 3 3869.5 4 6052.0 5 4270.5 6 2489.0 7 2368.5 8 2248.0 9 2352.5 10 2457.0 11 2507.0 12 2557.0 13 2644.0 14 2731.0 15 2566.5 16 2402.0 17 2495.0 18 2588.0 19 2784.5 20 2981.0 21 2993.0 22 3005.0 23 3578.0 24 4151.0 25 5106.5 26 8109.5 27 10157.0 28 12357.5 29 14558.0 30 16576.5 31 18595.0 32 22465.0 33 26335.0 34 30987.5 35 35640.0 36 37595.5 37 39551.0 38 42549.5 39 45548.0 40 51212.0 41 56876.0 42 63376.5 43 69877.0 44 76392.5 45 82908.0 46 92522.5 47 102137.0 48 113270.0 49 124403.0 50 122611.0 51 120819.0 52 108505.0 53 96191.0 54 89293.0 55 82395.0 56 79337.5 57 76280.0 58 73920.0 59 71560.0 60 68873.0 61 66186.0 62 59812.0 63 53438.0 64 48265.5 65 43093.0 66 36219.5 67 29346.0 68 25281.0 69 21216.0 70 18214.5 71 15213.0 72 12616.0 73 10019.0 74 8479.5 75 5326.0 76 3712.0 77 2754.5 78 1797.0 79 1399.5 80 1002.0 81 774.0 82 546.0 83 375.5 84 205.0 85 132.0 86 59.0 87 35.5 88 12.0 89 10.0 90 8.0 91 4.5 92 1.0 93 1.5 94 2.0 95 3.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1368303.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.232134472090053 #Duplication Level Percentage of deduplicated Percentage of total 1 76.40676655478111 22.335328745069543 2 10.199160875762825 5.962864844455574 3 3.601142912004454 3.158072815707845 4 1.5890891935811553 1.8580987597963794 5 0.8467502988499116 1.2376159300131528 6 0.5829807243739781 1.0225062557721958 7 0.3979032605606147 0.8142093133713684 8 0.31564428144300527 0.7381564864390536 9 0.26106792539380314 0.6868415431315106 >10 4.629809282979744 37.06592825391522 >50 1.0855989371340238 19.4012257919087 >100 0.07968591722833016 3.933095479347231 >500 0.002688788609913358 0.5076068278419354 >1k 0.0017110472972175917 1.2784489532302798 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3143 0.22970058532357235 No Hit CCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTCTGC 2909 0.21259910999245052 TruSeq Adapter, Index 27 (96% over 25bp) GCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTCTGC 2901 0.2120144441691643 TruSeq Adapter, Index 27 (96% over 25bp) CTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTCTGCT 2891 0.2112836118900565 TruSeq Adapter, Index 27 (100% over 25bp) TCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTCTGC 2807 0.20514462074555126 TruSeq Adapter, Index 27 (96% over 25bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2181 0.1593945200734048 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1924968373233122E-4 0.0 0.0 0.23211233184462798 0.0 2 2.1924968373233122E-4 0.0 0.0 0.9462816349887415 0.0 3 2.1924968373233122E-4 0.0 0.0 1.3581056242659704 0.0 4 2.1924968373233122E-4 0.0 0.0 1.8149488819362378 0.0 5 2.1924968373233122E-4 0.0 0.0 2.5579129768771973 0.0 6 2.1924968373233122E-4 0.0 0.0 3.098582696961126 0.0 7 2.1924968373233122E-4 0.0 0.0 3.589555822065727 0.0 8 2.1924968373233122E-4 0.0 0.0 4.369865446469094 0.0 9 2.1924968373233122E-4 0.0 0.0 4.804564486082396 0.0 10 2.923329116431083E-4 0.0 0.0 5.554763820586522 0.0 11 2.923329116431083E-4 0.0 0.0 6.738858279196933 0.0 12 2.923329116431083E-4 0.0 0.0 7.833645033300373 0.0 13 2.923329116431083E-4 0.0 0.0 8.167635384852623 0.0 14 2.923329116431083E-4 0.0 0.0 8.282887635267919 7.308322791077707E-5 15 3.6541613955388535E-4 0.0 0.0 8.473269443975493 7.308322791077707E-5 16 4.3849936746466245E-4 0.0 0.0 8.950941421600332 7.308322791077707E-5 17 4.3849936746466245E-4 0.0 0.0 9.601382150006248 7.308322791077707E-5 18 4.3849936746466245E-4 0.0 0.0 10.306123716749871 7.308322791077707E-5 19 5.115825953754395E-4 0.0 0.0 10.764136306066712 7.308322791077707E-5 20 5.115825953754395E-4 0.0 0.0 11.239469620398406 7.308322791077707E-5 21 5.115825953754395E-4 0.0 0.0 11.926086546620157 7.308322791077707E-5 22 5.846658232862166E-4 0.0 0.0 12.638574935522323 7.308322791077707E-5 23 5.846658232862166E-4 0.0 0.0 13.349236243726718 7.308322791077707E-5 24 6.577490511969937E-4 0.0 0.0 13.909638435346556 7.308322791077707E-5 25 6.577490511969937E-4 0.0 0.0 14.397249731967262 7.308322791077707E-5 26 6.577490511969937E-4 0.0 0.0 14.813239465235405 7.308322791077707E-5 27 6.577490511969937E-4 0.0 0.0 15.232006361164157 7.308322791077707E-5 28 7.308322791077707E-4 0.0 0.0 15.685122374210975 7.308322791077707E-5 29 7.308322791077707E-4 0.0 0.0 16.159286356896096 7.308322791077707E-5 30 7.308322791077707E-4 0.0 0.0 16.696228832356574 7.308322791077707E-5 31 7.308322791077707E-4 0.0 0.0 17.191733117591646 7.308322791077707E-5 32 8.039155070185478E-4 0.0 0.0 17.66721259837916 7.308322791077707E-5 33 8.039155070185478E-4 0.0 0.0 18.148904153539092 7.308322791077707E-5 34 8.039155070185478E-4 0.0 0.0 18.617367644447175 7.308322791077707E-5 35 8.039155070185478E-4 0.0 0.0 19.143055302809394 7.308322791077707E-5 36 8.039155070185478E-4 0.0 0.0 19.63651325766296 7.308322791077707E-5 37 8.039155070185478E-4 0.0 0.0 20.097960758691606 7.308322791077707E-5 38 8.039155070185478E-4 0.0 0.0 20.570955409730153 7.308322791077707E-5 39 8.039155070185478E-4 0.0 0.0 21.02926033195864 7.308322791077707E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGAT 25 3.891196E-5 45.000004 36 ACCGAAA 20 7.033757E-4 45.000004 20 CTACGAT 20 7.033757E-4 45.000004 22 GCGTAAA 25 3.891196E-5 45.000004 39 ACGCGTC 25 3.891196E-5 45.000004 35 GTCGATA 30 2.165807E-6 44.999996 25 ACGATTA 30 2.165807E-6 44.999996 12 CGACTAA 30 2.165807E-6 44.999996 13 TACGAAT 400 0.0 41.625004 12 CGGTAGT 200 0.0 41.625004 12 TTATGCG 95 0.0 40.263157 1 CGAATAT 410 0.0 40.060974 14 CACGACC 290 0.0 39.568966 27 TACCGAT 40 3.458863E-7 39.375004 27 TATGGGA 955 0.0 39.34555 4 GCTACGA 425 0.0 39.17647 10 TTTGGGA 6925 0.0 38.95668 4 TTTGGGC 3760 0.0 38.776596 4 TTGGGAC 2810 0.0 38.674377 5 GACCTAT 355 0.0 38.661972 33 >>END_MODULE