SRR2933153.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933153.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1037525
Sequences flagged as poor quality	0
Sequence length	51
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2279	0.21965735765403244	No Hit
CTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTGCT	2048	0.19739283390761667	No Hit
TCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTGC	1598	0.15402038505096263	No Hit
GCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTGC	1565	0.15083973880147467	No Hit
CCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTGC	1453	0.14004481819715187	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTCCGA	25	3.8905426E-5	45.0	12
CTACGTA	35	1.2117744E-7	45.0	35
CGATGCA	20	7.032969E-4	45.0	10
TAATCCG	20	7.032969E-4	45.0	17
GTCGCGA	60	3.6379788E-12	41.249996	17
TCGTTAG	50	1.0804797E-9	40.5	1
TTACGCG	50	1.0804797E-9	40.5	1
GTACGGG	145	0.0	40.344826	3
TACCGGG	105	0.0	38.57143	3
ATTACCG	35	6.247701E-6	38.571426	15
GCACGTA	35	6.247701E-6	38.571426	13
TTACGGG	350	0.0	38.571426	3
TACGTTG	35	6.247701E-6	38.571426	1
CGTTTTT	1285	0.0	37.996105	1
TATGGGA	490	0.0	37.65306	4
CGCTCGA	30	1.1398453E-4	37.499996	40
GACGCAC	60	1.546141E-10	37.499996	17
ACATACG	120	0.0	37.499996	17
TGGTCGA	30	1.1398453E-4	37.499996	25
TACCGCG	30	1.1398453E-4	37.499996	37