SRR2933151.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933151.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	509081
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC	2888	0.5672967563118639	No Hit
CTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGCT	2835	0.5568858393850881	Illumina Single End Adapter 2 (95% over 21bp)
TCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC	2689	0.5282067097377431	No Hit
GCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC	2033	0.3993470587195358	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1389	0.27284459643946646	No Hit
TCCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTG	889	0.1746283990170523	No Hit
TTCCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCT	664	0.13043111017696593	No Hit
GCCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTG	624	0.1225738143831728	No Hit
TGCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTG	574	0.1127521946409314	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACCGAT	20	7.029578E-4	45.000004	36
ACGTTTG	20	7.029578E-4	45.000004	1
GCGGTCC	20	7.029578E-4	45.000004	20
GCAACCC	20	7.029578E-4	45.000004	22
ATTCGCG	20	7.029578E-4	45.000004	12
TAACGCC	20	7.029578E-4	45.000004	12
CGACAAT	20	7.029578E-4	45.000004	20
ATCCGGA	20	7.029578E-4	45.000004	20
AACGGCG	20	7.029578E-4	45.000004	10
GCCGATA	35	1.2101373E-7	45.000004	9
CGGGCTT	40	6.8030204E-9	45.000004	6
AGACCCG	20	7.029578E-4	45.000004	39
GTCGTTG	20	7.029578E-4	45.000004	1
CGTGTTG	20	7.029578E-4	45.000004	1
TAAGGCG	20	7.029578E-4	45.000004	18
TAGGATA	20	7.029578E-4	45.000004	23
CGTCCGT	20	7.029578E-4	45.000004	44
CGATAGT	20	7.029578E-4	45.000004	11
TACACGA	20	7.029578E-4	45.000004	27
GCATAGG	35	1.2101373E-7	45.000004	2