##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933151.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 509081 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.08081425156311 33.0 31.0 34.0 30.0 34.0 2 32.27087830816707 34.0 31.0 34.0 30.0 34.0 3 32.34472706700898 34.0 31.0 34.0 30.0 34.0 4 35.855655583296176 37.0 35.0 37.0 35.0 37.0 5 35.12933305308978 37.0 35.0 37.0 35.0 37.0 6 34.83793148830932 37.0 35.0 37.0 32.0 37.0 7 35.6405463963495 37.0 35.0 37.0 35.0 37.0 8 35.90326883148261 37.0 35.0 37.0 35.0 37.0 9 37.76733957857394 39.0 38.0 39.0 35.0 39.0 10 37.14909611633512 39.0 37.0 39.0 34.0 39.0 11 37.084196817402336 39.0 37.0 39.0 33.0 39.0 12 36.898444451865224 39.0 35.0 39.0 33.0 39.0 13 36.746272204226834 39.0 35.0 39.0 33.0 39.0 14 37.80552210748388 40.0 37.0 41.0 33.0 41.0 15 37.92894254548883 40.0 37.0 41.0 33.0 41.0 16 37.9985365786584 40.0 36.0 41.0 33.0 41.0 17 37.978584940314015 40.0 36.0 41.0 33.0 41.0 18 37.9489216843685 39.0 36.0 41.0 33.0 41.0 19 37.96258355742996 40.0 36.0 41.0 34.0 41.0 20 37.84764703455835 39.0 36.0 41.0 33.0 41.0 21 37.7275148748431 39.0 36.0 41.0 33.0 41.0 22 37.78071858898682 39.0 36.0 41.0 33.0 41.0 23 37.69243401344776 39.0 36.0 41.0 33.0 41.0 24 37.65804459408228 39.0 36.0 41.0 33.0 41.0 25 37.55476240519682 39.0 35.0 41.0 33.0 41.0 26 37.53052657632086 39.0 35.0 41.0 33.0 41.0 27 37.520594954437506 39.0 35.0 41.0 33.0 41.0 28 37.46052396377001 39.0 35.0 41.0 33.0 41.0 29 37.42635454868675 39.0 35.0 41.0 33.0 41.0 30 37.38991830376698 39.0 36.0 41.0 33.0 41.0 31 37.29956333078626 39.0 35.0 41.0 32.0 41.0 32 37.251588646993305 39.0 35.0 41.0 32.0 41.0 33 37.15439586234803 39.0 35.0 41.0 32.0 41.0 34 37.014530104246674 39.0 35.0 41.0 32.0 41.0 35 36.91404707698775 39.0 35.0 41.0 31.0 41.0 36 36.78150628289015 39.0 35.0 41.0 31.0 41.0 37 36.694622270326335 39.0 35.0 40.0 31.0 41.0 38 36.615212510386364 39.0 35.0 40.0 31.0 41.0 39 36.62924956932198 39.0 35.0 40.0 31.0 41.0 40 36.57703783877222 39.0 35.0 40.0 31.0 41.0 41 36.523378401472456 39.0 35.0 40.0 31.0 41.0 42 36.423109485523916 39.0 35.0 40.0 30.0 41.0 43 36.2153861566234 38.0 35.0 40.0 30.0 41.0 44 36.109155517491324 38.0 35.0 40.0 30.0 41.0 45 36.199445667781745 38.0 35.0 40.0 30.0 41.0 46 36.070861022116326 38.0 35.0 40.0 30.0 41.0 47 36.01572834185522 38.0 35.0 40.0 30.0 41.0 48 35.939726683965816 38.0 35.0 40.0 29.0 41.0 49 36.021803995827774 38.0 35.0 40.0 30.0 41.0 50 35.81592320279091 38.0 35.0 40.0 29.0 41.0 51 34.7390945645192 37.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 6.0 11 3.0 12 8.0 13 10.0 14 5.0 15 6.0 16 19.0 17 41.0 18 67.0 19 178.0 20 249.0 21 432.0 22 751.0 23 1153.0 24 1764.0 25 2596.0 26 3843.0 27 4647.0 28 5280.0 29 6523.0 30 8517.0 31 11005.0 32 14597.0 33 20893.0 34 35165.0 35 48253.0 36 45208.0 37 65202.0 38 108013.0 39 124597.0 40 45.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.040500431169107 4.218582111687532 56.54404701805803 17.19687043908533 2 19.308322251272394 4.60378603797824 55.15743074284839 20.93046096790098 3 19.880922682245064 4.394781969863342 54.049159171133866 21.675136176757725 4 17.51784097226178 4.401460671288066 53.95880026950525 24.121898086944906 5 17.674594023347954 7.184318409054748 52.023548315494 23.1175392521033 6 20.37495015527981 6.97001066627904 54.33123609013104 18.32380308831011 7 82.41006833883017 1.634317525108971 10.835407332035569 5.120206804025293 8 84.6953628204549 2.235007788544456 7.781865754172715 5.287763636827931 9 79.09095016313711 4.56842820690617 10.631903370976328 5.708718258980397 10 36.16477535009164 27.100795354766728 19.402413368403064 17.332015926738574 11 28.609199714780164 25.85777116018865 26.10095446500655 19.432074660024632 12 26.384406410767635 22.045214808645383 32.0338020865049 19.53657669408208 13 22.00160681698983 28.212406277193608 31.704777825139814 18.08120908067675 14 18.976155071589787 29.505127867667426 30.724973039653808 20.79374402108898 15 15.991954129107155 25.21563366144091 38.25638749039937 20.536024719052566 16 17.465197090443368 23.117342819708455 34.833553010228236 24.583907079619944 17 17.576181393530696 22.98160803487068 30.506933081376047 28.935277490222578 18 19.34859089221558 22.963536254544955 34.67542493237815 23.012447920861316 19 21.78553118266052 25.074595201942323 30.842832476560705 22.297041138836452 20 24.36488495936796 25.059077042749582 30.10267521278539 20.47336278509707 21 21.967624012681675 27.107670488586294 29.496091977504562 21.428613521227465 22 20.287341307179016 25.324850072974638 28.4064814833003 25.98132713654605 23 18.611969411547474 26.687108731223518 28.077850086724904 26.623071770504104 24 20.489273809079496 24.479012180772806 32.09901764159338 22.932696368554318 25 17.954903050791522 26.713823536922416 30.062603004237047 25.268670408049015 26 17.888312468939127 27.37678286952371 30.77349184118048 23.96141282035668 27 19.71886595649808 25.68157130201284 30.892529872456446 23.70703286903263 28 17.489947572193813 25.261795274229442 33.89539189244933 23.352865261127402 29 17.85040101673408 24.34249166635565 32.671618072566055 25.13548924434422 30 21.047534675228498 25.155721781013234 30.581970256206777 23.21477328755149 31 23.07039547734054 27.2500839748488 27.117099243538846 22.562421304271815 32 22.8401767105824 27.989651941439575 26.43194305032009 22.738228297657937 33 24.117380141863475 25.649749254047983 26.461211477151963 23.77165912693658 34 20.46688051606719 24.065325557229595 29.862438393890166 25.60535553281305 35 21.2070377798425 23.980859627446318 29.006975314340938 25.80512727837024 36 25.91984379695962 23.358561800577903 28.75672044330863 21.964873959153845 37 23.662835580192542 25.893521856050413 29.772668789446083 20.670973774310962 38 21.891408243481884 28.02775982603947 27.559268564334555 22.52156336614409 39 20.878995680451638 25.960308870297656 29.220300895142426 23.940394554108284 40 22.40959690108254 23.024626729341698 30.37768056556815 24.188095804007613 41 21.62484948367745 22.789890017502128 30.066531652133943 25.51872884668648 42 25.766430096585808 22.739799756816694 27.47892771484302 24.014842431754474 43 25.819073978404223 23.45854588955392 28.209852656060626 22.51252747598123 44 21.72286924870502 24.856555243664562 28.250121297003815 25.1704542106266 45 21.137697144462276 24.737910077178288 27.204118794455106 26.92027398390433 46 22.834087306342212 24.171006185656115 29.82727699521294 23.167629512788732 47 21.698118766954572 23.15368281275475 31.954443398987586 23.19375502130309 48 22.23595066403971 22.985929547557266 30.310893551320913 24.467226237082116 49 22.79617585413716 20.72499268289329 32.5407940975994 23.938037365370146 50 22.547492442263607 21.295039492732982 30.20187357218203 25.955594492821376 51 21.212537886898154 21.159304707895206 28.034045662674504 29.59411174253213 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 87.0 1 223.5 2 360.0 3 1311.0 4 2262.0 5 1567.5 6 873.0 7 893.5 8 914.0 9 1028.5 10 1143.0 11 1137.5 12 1132.0 13 1100.5 14 1069.0 15 1148.5 16 1228.0 17 1165.0 18 1102.0 19 1197.0 20 1292.0 21 1208.0 22 1124.0 23 1376.5 24 1629.0 25 1871.0 26 2869.0 27 3625.0 28 3963.0 29 4301.0 30 5607.5 31 6914.0 32 8355.0 33 9796.0 34 11587.0 35 13378.0 36 15002.5 37 16627.0 38 18377.5 39 20128.0 40 23644.0 41 27160.0 42 30321.5 43 33483.0 44 35635.5 45 37788.0 46 40639.0 47 43490.0 48 50220.5 49 56951.0 50 61887.0 51 66823.0 52 60721.0 53 54619.0 54 43861.5 55 33104.0 56 27131.5 57 21159.0 58 17569.0 59 13979.0 60 12155.0 61 10331.0 62 8523.5 63 6716.0 64 5682.5 65 4649.0 66 3863.5 67 3078.0 68 2391.0 69 1704.0 70 1344.5 71 985.0 72 815.0 73 645.0 74 631.5 75 467.0 76 316.0 77 242.5 78 169.0 79 158.5 80 148.0 81 95.5 82 43.0 83 26.5 84 10.0 85 5.5 86 1.0 87 3.5 88 6.0 89 4.0 90 2.0 91 4.5 92 7.0 93 3.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 509081.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.15809977264408 #Duplication Level Percentage of deduplicated Percentage of total 1 71.03143088784516 22.842358414849972 2 12.387805282706989 7.967365564907575 3 5.020955911664624 4.843932034840742 4 2.4851268206691195 3.1966782498700526 5 1.41849645077342 2.2808075195556574 6 0.9599686295391353 1.8522460180396747 7 0.6654273923734396 1.4979216332776815 8 0.4673627466748086 1.202359827006838 9 0.3563252328852808 1.0312868151571948 >10 4.6723177982111235 37.40094734565657 >50 0.45043995198417697 8.866492999917327 >100 0.07884227110713546 4.151009313669399 >500 0.0024447215847173786 0.5406925483856305 >1k 0.0030559019808967234 2.325901714865704 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC 2888 0.5672967563118639 No Hit CTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGCT 2835 0.5568858393850881 Illumina Single End Adapter 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC 2689 0.5282067097377431 No Hit GCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC 2033 0.3993470587195358 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1389 0.27284459643946646 No Hit TCCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTG 889 0.1746283990170523 No Hit TTCCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCT 664 0.13043111017696593 No Hit GCCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTG 624 0.1225738143831728 No Hit TGCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTG 574 0.1127521946409314 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5873328605860364 0.0 2 0.0 0.0 0.0 2.2383471392568177 0.0 3 0.0 0.0 0.0 3.1165963766080447 0.0 4 0.0 0.0 0.0 4.105044187467221 0.0 5 0.0 0.0 0.0 5.625823788355881 0.0 6 0.0 0.0 0.0 6.6042535470779695 0.0 7 0.0 0.0 0.0 7.528075100033197 0.0 8 0.0 0.0 0.0 9.0700693995651 0.0 9 0.0 0.0 0.0 9.939675611543153 0.0 10 0.0 0.0 0.0 11.480884181495675 0.0 11 0.0 0.0 0.0 13.97537916363015 0.0 12 0.0 0.0 0.0 16.30251374535683 0.0 13 0.0 0.0 0.0 16.973330373751917 0.0 14 0.0 0.0 0.0 17.186263089763713 0.0 15 0.0 0.0 0.0 17.51685881028756 0.0 16 0.0 0.0 0.0 18.44048393084794 0.0 17 0.0 0.0 0.0 19.934941590827393 0.0 18 0.0 0.0 0.0 21.626224510441364 0.0 19 0.0 0.0 0.0 22.596207676185127 0.0 20 0.0 0.0 0.0 23.56049430247839 0.0 21 0.0 0.0 0.0 24.808429306927582 0.0 22 0.0 0.0 0.0 26.089168521315862 0.0 23 0.0 0.0 0.0 27.427462427393674 0.0 24 0.0 0.0 0.0 28.323979877465472 0.0 25 0.0 0.0 0.0 29.14369226115294 0.0 26 0.0 0.0 0.0 29.84475947835413 0.0 27 0.0 0.0 0.0 30.517343998302824 0.0 28 0.0 0.0 0.0 31.25200115502248 0.0 29 0.0 0.0 0.0 32.044998733011056 0.0 30 0.0 0.0 0.0 32.97274893386318 0.0 31 0.0 0.0 0.0 33.7409960301013 0.0 32 3.928647896896565E-4 0.0 0.0 34.47211740371375 0.0 33 3.928647896896565E-4 0.0 0.0 35.20873888438186 0.0 34 3.928647896896565E-4 0.0 0.0 35.96971798201072 0.0 35 3.928647896896565E-4 0.0 0.0 36.8214488460579 0.0 36 3.928647896896565E-4 0.0 0.0 37.524087522417844 0.0 37 3.928647896896565E-4 0.0 0.0 38.19097550291604 0.0 38 3.928647896896565E-4 0.0 0.0 38.85805991580907 0.0 39 3.928647896896565E-4 0.0 0.0 39.51767989769801 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGAT 20 7.029578E-4 45.000004 36 ACGTTTG 20 7.029578E-4 45.000004 1 GCGGTCC 20 7.029578E-4 45.000004 20 GCAACCC 20 7.029578E-4 45.000004 22 ATTCGCG 20 7.029578E-4 45.000004 12 TAACGCC 20 7.029578E-4 45.000004 12 CGACAAT 20 7.029578E-4 45.000004 20 ATCCGGA 20 7.029578E-4 45.000004 20 AACGGCG 20 7.029578E-4 45.000004 10 GCCGATA 35 1.2101373E-7 45.000004 9 CGGGCTT 40 6.8030204E-9 45.000004 6 AGACCCG 20 7.029578E-4 45.000004 39 GTCGTTG 20 7.029578E-4 45.000004 1 CGTGTTG 20 7.029578E-4 45.000004 1 TAAGGCG 20 7.029578E-4 45.000004 18 TAGGATA 20 7.029578E-4 45.000004 23 CGTCCGT 20 7.029578E-4 45.000004 44 CGATAGT 20 7.029578E-4 45.000004 11 TACACGA 20 7.029578E-4 45.000004 27 GCATAGG 35 1.2101373E-7 45.000004 2 >>END_MODULE