SRR2933150.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933150.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	391023
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTGCT	2652	0.678220974213793	TruSeq Adapter, Index 14 (95% over 22bp)
TCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTGC	2481	0.6344895313063426	TruSeq Adapter, Index 15 (95% over 21bp)
GCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTGC	2424	0.6199123836705258	TruSeq Adapter, Index 15 (95% over 21bp)
CCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTGC	2027	0.5183838290842226	TruSeq Adapter, Index 15 (95% over 21bp)
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	868	0.22198182715594733	No Hit
TCCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTG	843	0.21558834135076452	No Hit
GCCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTG	625	0.1598371451295704	No Hit
TGCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTG	558	0.14270260317168043	No Hit
TTCCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCT	511	0.13068284985793674	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGGG	25	3.8860686E-5	45.0	3
TCCGGAC	20	7.027571E-4	45.0	17
TATTTCG	20	7.027571E-4	45.0	27
TTGATAA	20	7.027571E-4	45.0	20
CTATGAC	20	7.027571E-4	45.0	28
TGCCCGC	20	7.027571E-4	45.0	44
CAACGCC	25	3.8860686E-5	45.0	11
GGCACGC	20	7.027571E-4	45.0	8
GCAACGC	25	3.8860686E-5	45.0	10
TTTCGCA	20	7.027571E-4	45.0	13
GACGTGA	20	7.027571E-4	45.0	39
CAGTTAG	20	7.027571E-4	45.0	21
CGGTTCT	20	7.027571E-4	45.0	13
TGGGTCG	50	2.1827873E-11	45.0	6
ATCAGGC	20	7.027571E-4	45.0	16
TTATGCG	25	3.8860686E-5	45.0	1
TTCACGG	20	7.027571E-4	45.0	2
GTGATCG	25	3.8860686E-5	45.0	13
ATTCGGT	20	7.027571E-4	45.0	11
CCCACGT	20	7.027571E-4	45.0	35