##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933149.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1726690 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.09168408921115 33.0 31.0 34.0 30.0 34.0 2 32.27206215360024 34.0 31.0 34.0 30.0 34.0 3 32.35788937215134 34.0 31.0 34.0 30.0 34.0 4 35.87235809554697 37.0 35.0 37.0 35.0 37.0 5 35.07728138808935 37.0 35.0 37.0 33.0 37.0 6 34.73567056043644 37.0 35.0 37.0 32.0 37.0 7 35.55794323242736 37.0 35.0 37.0 33.0 37.0 8 35.82349118834301 37.0 35.0 37.0 35.0 37.0 9 37.69951178265931 39.0 37.0 39.0 35.0 39.0 10 37.18467298704458 39.0 37.0 39.0 34.0 39.0 11 37.08475290874448 39.0 37.0 39.0 33.0 39.0 12 36.820426944037436 39.0 35.0 39.0 33.0 39.0 13 36.656866026906975 39.0 35.0 39.0 33.0 39.0 14 37.49425722046227 40.0 36.0 41.0 32.0 41.0 15 37.64973040904852 40.0 36.0 41.0 32.0 41.0 16 37.766592150299125 40.0 36.0 41.0 33.0 41.0 17 37.75590233336615 40.0 36.0 41.0 33.0 41.0 18 37.734621153768195 39.0 36.0 41.0 33.0 41.0 19 37.73822052597745 40.0 36.0 41.0 33.0 41.0 20 37.59660332775426 39.0 36.0 41.0 33.0 41.0 21 37.468827062182555 39.0 35.0 41.0 32.0 41.0 22 37.587326039995595 39.0 35.0 41.0 33.0 41.0 23 37.53965506257637 39.0 35.0 41.0 33.0 41.0 24 37.466299683208916 39.0 35.0 41.0 33.0 41.0 25 37.348178306470764 39.0 35.0 41.0 32.0 41.0 26 37.3290353219165 39.0 35.0 41.0 32.0 41.0 27 37.27656267193301 39.0 35.0 41.0 32.0 41.0 28 37.17749451262242 39.0 35.0 41.0 32.0 41.0 29 37.10776688345911 39.0 35.0 41.0 32.0 41.0 30 36.985300777788716 39.0 35.0 41.0 31.0 41.0 31 36.8480462619231 39.0 35.0 41.0 31.0 41.0 32 36.81501427586886 39.0 35.0 41.0 31.0 41.0 33 36.71924028053675 39.0 35.0 41.0 31.0 41.0 34 36.51742466800642 39.0 35.0 40.0 30.0 41.0 35 36.40820413623754 39.0 35.0 40.0 30.0 41.0 36 36.301370830896104 38.0 35.0 40.0 30.0 41.0 37 36.27029113506188 38.0 35.0 40.0 30.0 41.0 38 36.13199647881206 38.0 35.0 40.0 30.0 41.0 39 36.065490620783116 38.0 35.0 40.0 30.0 41.0 40 35.91720691033133 38.0 35.0 40.0 29.0 41.0 41 35.7799292287556 38.0 35.0 40.0 29.0 41.0 42 35.76653076116732 38.0 35.0 40.0 29.0 41.0 43 35.691127533025615 38.0 34.0 40.0 29.0 41.0 44 35.64602679114375 38.0 34.0 40.0 29.0 41.0 45 35.638307397390385 38.0 34.0 40.0 29.0 41.0 46 35.40249089298021 37.0 34.0 40.0 28.0 41.0 47 35.29709617823698 37.0 34.0 40.0 28.0 41.0 48 35.21977309186941 37.0 34.0 40.0 28.0 41.0 49 35.289830832401876 37.0 34.0 40.0 28.0 41.0 50 35.068481313959076 37.0 34.0 40.0 27.0 41.0 51 33.955590754565094 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 12.0 9 26.0 10 39.0 11 33.0 12 38.0 13 24.0 14 37.0 15 66.0 16 123.0 17 272.0 18 460.0 19 841.0 20 1564.0 21 2591.0 22 3799.0 23 5545.0 24 7946.0 25 11063.0 26 15132.0 27 18629.0 28 22060.0 29 26968.0 30 34200.0 31 43993.0 32 58166.0 33 83219.0 34 136597.0 35 145118.0 36 158937.0 37 230129.0 38 344544.0 39 374369.0 40 150.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.86799599233215 4.502603246674273 52.152731526794035 16.476669234199537 2 21.169636703751106 5.775443188991654 50.9213002913088 22.133619815948432 3 21.94904702060011 5.824728237263202 49.97944043227215 22.24678430986454 4 19.23906433696842 5.016939925522243 50.73145729690911 25.012538440600224 5 19.193775373691864 7.867306812456203 48.40596748692585 24.532950326926084 6 22.23879213987456 8.327899043835316 51.45220045288963 17.981108363400494 7 82.47531404015776 2.399330510977651 10.59576414990531 4.52959129895928 8 84.28803085672587 3.6018046088180276 7.670745762122906 4.439418772333193 9 79.04510942902317 4.888312320103783 9.668962002443983 6.397616248429075 10 42.23172659828921 25.425930537618218 16.901470443449607 15.440872420642965 11 33.350746225437106 22.56861393764949 24.12755039989807 19.953089437015333 12 28.65331935668823 20.03689139335955 30.509124394071897 20.800664855880328 13 26.76085458304617 21.474207877499722 32.3697942305799 19.395143308874204 14 22.31216952666663 23.02387805570195 33.88830652867625 20.775645888955168 15 19.91260735858782 20.631091857832036 36.27721247010175 23.17908831347839 16 23.9117038958933 21.186142272208677 30.831069850407427 24.0710839814906 17 24.901400946319256 20.771881461061337 28.98603686822765 25.340680724391756 18 25.810770896918385 19.538017826013935 31.172184931863857 23.47902634520383 19 26.132600524703335 22.4300250768812 27.801863681378826 23.63551071703664 20 26.52873416768499 25.17186061192223 27.574781807967845 20.72462341242493 21 26.003567519357844 24.610671284364884 28.81130949967858 20.574451696598693 22 23.898846926778983 20.976029281457585 29.84536888497646 25.279754906786973 23 23.244821015932217 23.571862928493246 28.64660130075462 24.536714754819915 24 22.8788607103765 23.744910783058916 28.306412847702827 25.069815658861756 25 24.34021161876191 24.363377328877796 25.569731683162583 25.726679369197715 26 22.34865552009915 22.412477051468414 26.779271322588304 28.45959610584413 27 22.334640265479038 21.70181097938831 29.429196902744557 26.534351852388095 28 20.09804886806549 23.006967087317353 29.238079794288495 27.65690425032866 29 22.73569662186032 22.547764798545195 28.20720569413155 26.50933288546294 30 24.20156484371833 21.957965818994722 29.367170713909275 24.473298623377676 31 25.16282598497704 23.923402579501822 27.144652485391124 23.769118950130018 32 25.85160046099763 24.12170105809381 25.448690847807075 24.578007633101485 33 24.873660008455484 22.31772929709444 26.177542002328153 26.63106869212192 34 21.673606727322216 23.450069207558972 29.251979220358027 25.62434484476078 35 21.316275648784668 25.59839924943099 26.704330250363412 26.380994851420926 36 23.45823512037482 25.00443044205966 25.628340929755776 25.90899350780974 37 22.353462404948196 26.350416114067958 26.65956251556446 24.636558965419386 38 23.24881710092721 25.239446571185333 28.148770190364225 23.362966137523237 39 22.900346906508986 23.51111085371433 27.46607671324905 26.122465526527634 40 23.882167615495543 23.6520741997695 28.749457053669158 23.716301131065794 41 20.282332092037368 24.632678708974975 26.022621315928163 29.062367883059498 42 20.819429081074194 23.442134951844277 27.81524187897075 27.92319408811078 43 21.39133254956014 21.707197006990253 28.38280177680997 28.51866866663964 44 23.0235884843255 21.47525033445494 28.520058609246597 26.981102571972965 45 22.562185453092333 21.563511689996467 26.487093803751687 29.387209053159513 46 22.40489028140546 22.62797606982145 28.292745078734455 26.674388570038627 47 19.433945873318315 24.089326978206856 30.790240286328174 25.68648686214665 48 20.4257278376547 24.918022343327408 28.999878380021894 25.656371438996 49 22.878281567623603 22.023524778622683 29.965656834753197 25.132536819000517 50 21.415424888080665 23.155285546334316 28.33096850042567 27.098321065159354 51 20.603177177142392 23.189976197232856 26.535741794995047 29.6711048306297 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 274.0 1 1088.5 2 1903.0 3 5203.5 4 8504.0 5 5698.0 6 2892.0 7 2876.0 8 2860.0 9 2946.0 10 3032.0 11 3030.5 12 3029.0 13 2986.5 14 2944.0 15 3006.5 16 3069.0 17 3055.0 18 3041.0 19 2940.5 20 2840.0 21 3288.5 22 3737.0 23 4340.0 24 4943.0 25 5650.5 26 8305.0 27 10252.0 28 11371.0 29 12490.0 30 14998.5 31 17507.0 32 21721.5 33 25936.0 34 29858.0 35 33780.0 36 36765.5 37 39751.0 38 44426.5 39 49102.0 40 55212.5 41 61323.0 42 68072.0 43 74821.0 44 84973.5 45 95126.0 46 120801.5 47 146477.0 48 161141.5 49 175806.0 50 174750.0 51 173694.0 52 156520.0 53 139346.0 54 132072.0 55 124798.0 56 115610.0 57 106422.0 58 99772.0 59 93122.0 60 83955.5 61 74789.0 62 69296.5 63 63804.0 64 57373.5 65 50943.0 66 44158.5 67 37374.0 68 31788.5 69 26203.0 70 22034.0 71 17865.0 72 14482.5 73 11100.0 74 9333.0 75 5834.5 76 4103.0 77 3141.0 78 2179.0 79 1527.5 80 876.0 81 611.0 82 346.0 83 271.5 84 197.0 85 147.0 86 97.0 87 72.5 88 48.0 89 31.5 90 15.0 91 10.5 92 6.0 93 3.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1726690.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.257325077967092 #Duplication Level Percentage of deduplicated Percentage of total 1 76.2535452773769 23.834818530824524 2 10.11753783870545 6.324943384260978 3 3.4957050171584805 3.277991642940095 4 1.6760724329672239 2.095581635659029 5 0.9825197355182551 1.5355469384306175 6 0.679772801771825 1.2748727666485449 7 0.49511315568177205 1.0833139000266294 8 0.3881714737048591 0.9706561551669068 9 0.32332566501259785 0.9095665875613796 >10 5.004725570715192 41.157981014156334 >50 0.49937232998079634 9.455157881471653 >100 0.07568810017088404 4.273323618336431 >500 0.00569497039809002 1.190711562276538 >1k 0.002571922115266461 2.319579164648956 >5k 1.837087225190329E-4 0.2959552175913039 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGC 5154 0.29849017484319706 Illumina PCR Primer Index 2 (95% over 24bp) CTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGCT 4913 0.2845328344983755 Illumina PCR Primer Index 2 (96% over 25bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4741 0.27457157914854435 No Hit GAATCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTC 4263 0.24688855556005998 Illumina PCR Primer Index 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGC 4155 0.24063381382877064 Illumina PCR Primer Index 2 (95% over 24bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGC 4149 0.24028632817703235 No Hit CCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGC 3812 0.220769217404398 Illumina PCR Primer Index 2 (95% over 24bp) GAATGATACCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCG 3632 0.2103446478522491 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2323 0.13453486149801064 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 2171 0.12573189165397378 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.791427528971616E-5 0.0 0.0 0.30775645888955167 0.0 2 5.791427528971616E-5 0.0 0.0 1.1569534774626598 0.0 3 5.791427528971616E-5 0.0 0.0 1.6501514458298827 0.0 4 5.791427528971616E-5 0.0 0.0 2.305046070805993 0.0 5 5.791427528971616E-5 0.0 0.0 3.5215933375417707 0.0 6 5.791427528971616E-5 0.0 0.0 4.267471288998025 0.0 7 5.791427528971616E-5 0.0 0.0 4.969334391234096 0.0 8 1.1582855057943232E-4 0.0 0.0 6.036752399098854 0.0 9 1.1582855057943232E-4 0.0 0.0 6.618327551558184 0.0 10 1.1582855057943232E-4 0.0 0.0 7.7901649977703 0.0 11 1.1582855057943232E-4 0.0 0.0 9.388598995766467 0.0 12 1.1582855057943232E-4 0.0 0.0 11.077784663141617 0.0 13 1.1582855057943232E-4 0.0 0.0 11.580017258454037 0.0 14 1.1582855057943232E-4 0.0 0.0 11.77935819400124 0.0 15 1.1582855057943232E-4 0.0 0.0 12.086825081514343 0.0 16 1.1582855057943232E-4 0.0 0.0 12.685484945184138 0.0 17 1.1582855057943232E-4 0.0 0.0 13.458177206099531 0.0 18 1.1582855057943232E-4 0.0 0.0 14.304478510908154 0.0 19 1.737428258691485E-4 0.0 0.0 14.943330881629013 0.0 20 1.737428258691485E-4 0.0 0.0 15.59677764972288 0.0 21 1.737428258691485E-4 0.0 0.0 16.459179123062043 0.0 22 2.3165710115886465E-4 0.0 0.0 17.39049858399597 0.0 23 2.3165710115886465E-4 0.0 0.0 18.22712820483121 0.0 24 2.3165710115886465E-4 0.0 0.0 18.885266029223544 0.0 25 2.3165710115886465E-4 0.0 0.0 19.48323092158986 0.0 26 2.3165710115886465E-4 0.0 0.0 20.022065338885383 0.0 27 2.3165710115886465E-4 0.0 0.0 20.600571034754356 0.0 28 2.3165710115886465E-4 0.0 0.0 21.154289420799333 0.0 29 2.3165710115886465E-4 0.0 0.0 21.811153131135292 0.0 30 2.3165710115886465E-4 0.0 0.0 22.635504925609112 0.0 31 2.3165710115886465E-4 0.0 0.0 23.22796796182291 0.0 32 2.3165710115886465E-4 0.0 0.0 23.81759319854751 0.0 33 2.3165710115886465E-4 0.0 0.0 24.412141148671736 0.0 34 2.3165710115886465E-4 0.0 0.0 25.079603171385713 0.0 35 2.3165710115886465E-4 0.0 0.0 25.88710191175023 0.0 36 2.3165710115886465E-4 0.0 0.0 26.488773317735088 0.0 37 2.8957137644858083E-4 0.0 0.0 27.08442163908982 0.0 38 2.8957137644858083E-4 0.0 0.0 27.804180252390413 0.0 39 2.8957137644858083E-4 0.0 0.0 29.036190630628543 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATTCGG 20 7.034271E-4 45.000004 13 TATACCG 20 7.034271E-4 45.000004 39 TACGGGA 260 0.0 42.403843 4 TATGGGA 840 0.0 39.642857 4 CGTTTTT 2675 0.0 39.364483 1 TGGGCGA 2620 0.0 38.387405 6 CGTTGAT 200 0.0 38.250004 25 ACATACG 265 0.0 38.207546 17 TACGGGT 125 0.0 37.8 4 TTACGGG 520 0.0 37.211536 3 TTTGGGC 4210 0.0 37.143707 4 TTTGGGA 7280 0.0 37.057003 4 TTGGGAC 3105 0.0 36.884056 5 TCGTTGA 215 0.0 36.627907 24 TTAATCG 215 0.0 36.627907 20 ATACGAA 265 0.0 36.509434 19 TTGGGAT 3340 0.0 36.377247 5 TTTACGG 310 0.0 36.29032 2 GTCGAAC 25 0.002107401 36.000004 21 TAAACCG 25 0.002107401 36.000004 11 >>END_MODULE