SRR2933145.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933145.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	969919
Sequences flagged as poor quality	0
Sequence length	51
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2290	0.23610218997668878	No Hit
GCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC	2243	0.2312564245055515	No Hit
CTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGCT	2157	0.2223897047073003	No Hit
TCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC	2055	0.21187336262100237	No Hit
CCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC	1596	0.1645498232326617	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTATGCG	35	1.2116652E-7	45.000004	1
GGATACG	50	2.1827873E-11	45.000004	9
ACTAGCG	30	2.1651504E-6	45.000004	36
ACGTCCA	35	1.2116652E-7	45.000004	33
CGCGAAA	20	7.032742E-4	45.0	22
ACGGCAT	20	7.032742E-4	45.0	42
GTCACGA	20	7.032742E-4	45.0	38
TATTACG	20	7.032742E-4	45.0	1
ACTAACG	20	7.032742E-4	45.0	25
GTATCGC	20	7.032742E-4	45.0	32
CGTCCGA	20	7.032742E-4	45.0	35
TACCGGA	20	7.032742E-4	45.0	3
AAACACG	140	0.0	41.785717	40
TAAGCGA	60	3.6379788E-12	41.250004	18
CTAAGCG	55	6.002665E-11	40.909092	17
ATACTAT	660	0.0	40.56818	45
TTCTACG	90	0.0	40.0	1
TGCGTTG	180	0.0	40.0	1
CGATTAA	40	3.4574805E-7	39.375	24
TATCCGG	75	0.0	39.0	2