##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933145.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 969919 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.170168849151324 33.0 31.0 34.0 30.0 34.0 2 32.356624625355316 34.0 31.0 34.0 30.0 34.0 3 32.422784789245284 34.0 31.0 34.0 30.0 34.0 4 35.91809316035669 37.0 35.0 37.0 35.0 37.0 5 35.12891179572727 37.0 35.0 37.0 35.0 37.0 6 34.82271921675934 37.0 35.0 37.0 32.0 37.0 7 35.61723504746273 37.0 35.0 37.0 33.0 37.0 8 35.90034013149552 37.0 35.0 37.0 35.0 37.0 9 37.762265714972074 39.0 38.0 39.0 35.0 39.0 10 37.23590939037177 39.0 37.0 39.0 34.0 39.0 11 37.167522236392934 39.0 37.0 39.0 34.0 39.0 12 36.96334023768995 39.0 37.0 39.0 33.0 39.0 13 36.8683302420099 39.0 37.0 39.0 33.0 39.0 14 37.99040229132536 40.0 37.0 41.0 33.0 41.0 15 38.10710482009323 40.0 37.0 41.0 33.0 41.0 16 38.1087554733952 40.0 37.0 41.0 33.0 41.0 17 38.06699734720116 40.0 37.0 41.0 33.0 41.0 18 38.01933769727163 40.0 37.0 41.0 33.0 41.0 19 38.011698915064045 40.0 37.0 41.0 34.0 41.0 20 37.920057241893396 40.0 36.0 41.0 33.0 41.0 21 37.80811284241261 40.0 36.0 41.0 33.0 41.0 22 37.84117539712079 40.0 36.0 41.0 33.0 41.0 23 37.75942836463663 40.0 36.0 41.0 33.0 41.0 24 37.69677880317841 39.0 36.0 41.0 33.0 41.0 25 37.55983953299193 39.0 35.0 41.0 33.0 41.0 26 37.504897831674604 39.0 35.0 41.0 33.0 41.0 27 37.468156619264086 39.0 35.0 41.0 33.0 41.0 28 37.38753854703331 39.0 35.0 41.0 33.0 41.0 29 37.32205988335108 39.0 35.0 41.0 32.0 41.0 30 37.23279572830309 39.0 35.0 41.0 32.0 41.0 31 37.14190257124564 39.0 35.0 41.0 32.0 41.0 32 37.093731538406814 39.0 35.0 41.0 32.0 41.0 33 36.985967900412305 39.0 35.0 41.0 31.0 41.0 34 36.85568794919988 39.0 35.0 41.0 31.0 41.0 35 36.70460213687947 39.0 35.0 41.0 31.0 41.0 36 36.55426380965833 39.0 35.0 40.0 31.0 41.0 37 36.49055745892183 39.0 35.0 40.0 31.0 41.0 38 36.3864807267411 39.0 35.0 40.0 30.0 41.0 39 36.33185142264457 38.0 35.0 40.0 30.0 41.0 40 36.215499438612916 38.0 35.0 40.0 30.0 41.0 41 36.07694250757022 38.0 35.0 40.0 30.0 41.0 42 36.010077130152105 38.0 35.0 40.0 30.0 41.0 43 35.841049613421326 38.0 35.0 40.0 29.0 41.0 44 35.7452952256838 38.0 35.0 40.0 29.0 41.0 45 35.72396354747149 38.0 34.0 40.0 29.0 41.0 46 35.49445056752162 38.0 34.0 40.0 28.0 41.0 47 35.36879368277145 37.0 34.0 40.0 28.0 41.0 48 35.276460199253755 37.0 34.0 40.0 28.0 41.0 49 35.280880155971786 37.0 34.0 40.0 28.0 41.0 50 35.045668762030644 36.0 34.0 40.0 28.0 41.0 51 33.93848455386481 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 14.0 10 31.0 11 11.0 12 9.0 13 15.0 14 24.0 15 36.0 16 46.0 17 89.0 18 200.0 19 360.0 20 683.0 21 1071.0 22 1687.0 23 2531.0 24 3672.0 25 5381.0 26 7582.0 27 9435.0 28 11602.0 29 13735.0 30 17360.0 31 22109.0 32 29204.0 33 41314.0 34 69312.0 35 90153.0 36 90285.0 37 132748.0 38 198126.0 39 221013.0 40 74.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.91424541636982 4.639975090703451 54.01152054965414 16.434258943272585 2 21.368588510999373 4.261696079775734 53.123198947540985 21.246516461683914 3 22.06070816222798 4.578320457687704 51.56461518951583 21.796356190568492 4 18.793631220751422 4.98835469766032 50.75506305165689 25.462951029931364 5 17.233397840438222 7.9332397860027495 50.22398777629885 24.609374597260185 6 22.046377068600574 7.773432626848222 53.02143787264709 17.158752431904105 7 85.07081519178405 2.201524044791369 8.44441649251123 4.283244270913345 8 87.17666114386871 2.573307667959902 6.449816943476723 3.80021424469466 9 81.20379124442351 5.23404531718628 8.577623492271004 4.984539946119212 10 40.83774005870593 26.096612191327317 15.752655634130273 17.312992115836476 11 31.247867089932253 23.884984210021663 24.023140076645575 20.844008623400512 12 26.603458639329673 20.999485524048918 31.882146859686223 20.514908976935185 13 23.692081503713197 23.68445200063098 32.59550539787343 20.02796109778239 14 21.089802344319473 25.20447583767304 32.0790705203218 21.626651297685683 15 19.141392219350276 21.930594204258295 36.50593503168821 22.42207854470322 16 21.83027654886645 20.901023693731126 33.45320588626473 23.815493871137694 17 22.37238367327581 19.725152306532813 29.990339399475623 27.91212462071575 18 23.49629195840065 20.82524416987398 31.158993689163733 24.519470182561637 19 24.473280758496326 23.37421990908519 28.82570606411463 23.326793268303845 20 28.03007261431109 22.1073099918653 27.663134756613694 22.19948263720991 21 26.65439072747312 23.235960941068274 27.081952204256233 23.027696127202375 22 25.03559575593426 22.457648525289226 26.86760440820316 25.639151310573354 23 24.480188551827524 23.96571260074295 25.83741528931797 25.71668355811155 24 24.097166876821674 21.741300046704932 29.457614501829532 24.70391857464386 25 23.05924515346127 23.496188857007645 28.197921682119848 25.246644307411238 26 22.692719701335882 24.71154807772608 27.747884101662095 24.847848119275938 27 23.181214101383723 23.620426035576166 28.742193935782268 24.456165927257842 28 21.456224695051855 23.38886030689161 30.36748429508031 24.78743070297623 29 23.008209963924823 23.28874885428577 28.58599532538284 25.117045856406566 30 24.40461523075638 23.683833392272962 28.109666889709345 23.801884487261308 31 26.02155437722119 25.72854021830689 24.727528793641532 23.52237661083039 32 25.54316391368764 25.30108184291678 24.73845754129984 24.417296702095744 33 25.636573775748282 24.02540830729164 25.24148923776109 25.096528679198986 34 23.781676614232737 23.817452797604748 27.114326041659147 25.28654454650337 35 24.559370421653767 24.61452966691033 25.85494252612847 24.971157385307432 36 26.97276782906614 24.229652166830427 25.692454730755866 23.105125273347568 37 23.94602023467939 26.73233538058333 25.51264590135877 23.80899848337851 38 22.586731469328882 27.222891808491223 25.396244428658477 24.794132293521418 39 23.955093157263647 25.69162991961184 26.41406138038331 23.9392155427412 40 24.962909273867197 24.67175094002695 26.46798340892384 23.89735637718201 41 21.775735911967907 23.92725578115286 27.21938636112913 27.077621945750106 42 23.603311204337682 23.627540031693368 26.65748376926321 26.11166499470574 43 24.462352010838018 22.869950995907907 27.649525372737312 25.018171620516767 44 22.78262411603443 24.50895384047534 26.855129139649808 25.853292903840426 45 23.38019978987936 24.326670577646176 26.05258789651507 26.240541735959393 46 24.72959082150159 23.722496414649058 27.199590893672564 24.348321870176786 47 22.36320764929855 24.986828797043877 28.284733055028305 24.365230498629266 48 23.293903923935915 23.17853346516565 28.232048243203817 25.295514367694622 49 23.054090083811122 22.633436400359205 29.474626231675018 24.837847284154655 50 21.87306362696266 24.432761911046182 27.60776930857113 26.086405153420028 51 21.92946008893526 23.81683418924673 26.62974949454542 27.62395622727259 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 137.0 1 603.5 2 1070.0 3 2704.5 4 4339.0 5 3044.0 6 1749.0 7 1716.5 8 1684.0 9 1787.5 10 1891.0 11 1910.0 12 1929.0 13 1932.0 14 1935.0 15 1906.5 16 1878.0 17 1815.5 18 1753.0 19 1985.5 20 2218.0 21 2313.5 22 2409.0 23 2883.0 24 3357.0 25 3782.5 26 5240.0 27 6272.0 28 7762.0 29 9252.0 30 9800.5 31 10349.0 32 13495.5 33 16642.0 34 18624.5 35 20607.0 36 22670.5 37 24734.0 38 28051.5 39 31369.0 40 34348.5 41 37328.0 42 42814.0 43 48300.0 44 49972.5 45 51645.0 46 56388.0 47 61131.0 48 70103.0 49 79075.0 50 85213.0 51 91351.0 52 90857.0 53 90363.0 54 81856.0 55 73349.0 56 67731.5 57 62114.0 58 57980.5 59 53847.0 60 50503.5 61 47160.0 62 42027.0 63 36894.0 64 32958.0 65 29022.0 66 24858.5 67 20695.0 68 17240.0 69 13785.0 70 11649.0 71 9513.0 72 8003.0 73 6493.0 74 4929.0 75 2749.0 76 2133.0 77 1751.5 78 1370.0 79 973.0 80 576.0 81 478.0 82 380.0 83 274.5 84 169.0 85 110.5 86 52.0 87 34.5 88 17.0 89 12.5 90 8.0 91 4.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 969919.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.16037820016855 #Duplication Level Percentage of deduplicated Percentage of total 1 75.66021406911402 22.06280456961078 2 10.615287568453308 6.190916003992921 3 3.820591639481864 3.3422969146707957 4 1.759343749921816 2.0521251652729164 5 0.9551660054219557 1.3926500981024237 6 0.5860198777528972 1.0253136760854613 7 0.4247149583308273 0.8669394168537025 8 0.32223831001118447 0.7517272792407439 9 0.24896708018401992 0.6533976795801939 >10 4.315814054473333 34.58261464285701 >50 1.215315183572383 22.182995583242082 >100 0.07353928398442097 3.6592569751023056 >500 0.0010455822367453074 0.18598639812351514 >1k 0.0017426370612421789 1.0509755972651749 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2290 0.23610218997668878 No Hit GCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC 2243 0.2312564245055515 No Hit CTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGCT 2157 0.2223897047073003 No Hit TCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC 2055 0.21187336262100237 No Hit CCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC 1596 0.1645498232326617 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.24744334320701006 0.0 2 0.0 0.0 0.0 0.953584783884015 0.0 3 0.0 0.0 0.0 1.3539274929143568 0.0 4 0.0 0.0 0.0 1.7946859480018436 0.0 5 0.0 0.0 0.0 2.5540277074683555 0.0 6 0.0 0.0 0.0 3.0568532011436007 0.0 7 0.0 0.0 0.0 3.52029396269173 0.0 8 0.0 0.0 0.0 4.3126281679191765 0.0 9 0.0 0.0 0.0 4.769573541708122 0.0 10 0.0 0.0 0.0 5.556134068927405 0.0 11 1.0310139300292086E-4 0.0 0.0 6.812733846847005 0.0 12 1.0310139300292086E-4 0.0 0.0 7.956953106393421 0.0 13 1.0310139300292086E-4 0.0 0.0 8.310487783000436 0.0 14 1.0310139300292086E-4 0.0 0.0 8.430910210027848 0.0 15 1.0310139300292086E-4 0.0 0.0 8.622885003799286 0.0 16 1.0310139300292086E-4 0.0 0.0 9.133649304735757 0.0 17 1.0310139300292086E-4 0.0 0.0 9.910724503798772 0.0 18 1.0310139300292086E-4 0.0 0.0 10.7624451113959 0.0 19 1.0310139300292086E-4 0.0 0.0 11.26124965074403 0.0 20 1.0310139300292086E-4 0.0 0.0 11.820265403605868 0.0 21 1.0310139300292086E-4 0.0 0.0 12.555378335716695 0.0 22 1.0310139300292086E-4 0.0 0.0 13.324927133090496 0.0 23 1.0310139300292086E-4 0.0 0.0 14.086434021810069 0.0 24 1.0310139300292086E-4 0.0 0.0 14.66359561984042 0.0 25 1.0310139300292086E-4 0.0 0.0 15.165080795406627 0.0 26 1.0310139300292086E-4 0.0 0.0 15.622644777553589 0.0 27 1.0310139300292086E-4 0.0 0.0 16.071857546867317 0.0 28 1.0310139300292086E-4 0.0 0.0 16.51148188663177 0.0 29 1.0310139300292086E-4 0.0 0.0 17.01935934856416 0.0 30 1.0310139300292086E-4 0.0 0.0 17.614666791763025 0.0 31 1.0310139300292086E-4 0.0 0.0 18.156877017565385 0.0 32 1.0310139300292086E-4 0.0 0.0 18.639700840998064 0.0 33 1.0310139300292086E-4 0.0 0.0 19.14541317367739 0.0 34 1.0310139300292086E-4 0.0 0.0 19.646589045064587 0.0 35 2.0620278600584171E-4 0.0 0.0 20.201068336634297 0.0 36 2.0620278600584171E-4 0.0 0.0 20.698017050908376 0.0 37 2.0620278600584171E-4 0.0 0.0 21.17506719633289 0.0 38 2.0620278600584171E-4 0.0 0.0 21.670984896676938 0.0 39 3.093041790087626E-4 0.0 0.0 22.177006533535273 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTATGCG 35 1.2116652E-7 45.000004 1 GGATACG 50 2.1827873E-11 45.000004 9 ACTAGCG 30 2.1651504E-6 45.000004 36 ACGTCCA 35 1.2116652E-7 45.000004 33 CGCGAAA 20 7.032742E-4 45.0 22 ACGGCAT 20 7.032742E-4 45.0 42 GTCACGA 20 7.032742E-4 45.0 38 TATTACG 20 7.032742E-4 45.0 1 ACTAACG 20 7.032742E-4 45.0 25 GTATCGC 20 7.032742E-4 45.0 32 CGTCCGA 20 7.032742E-4 45.0 35 TACCGGA 20 7.032742E-4 45.0 3 AAACACG 140 0.0 41.785717 40 TAAGCGA 60 3.6379788E-12 41.250004 18 CTAAGCG 55 6.002665E-11 40.909092 17 ATACTAT 660 0.0 40.56818 45 TTCTACG 90 0.0 40.0 1 TGCGTTG 180 0.0 40.0 1 CGATTAA 40 3.4574805E-7 39.375 24 TATCCGG 75 0.0 39.0 2 >>END_MODULE