##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933143.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1081428 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.186040124723974 33.0 31.0 34.0 30.0 34.0 2 32.365819083656056 34.0 31.0 34.0 30.0 34.0 3 32.45109521854437 34.0 31.0 34.0 30.0 34.0 4 35.94906457017943 37.0 35.0 37.0 35.0 37.0 5 35.149255428932854 37.0 35.0 37.0 35.0 37.0 6 34.82803478363793 37.0 35.0 37.0 32.0 37.0 7 35.611485924166935 37.0 35.0 37.0 33.0 37.0 8 35.88624115521329 37.0 35.0 37.0 35.0 37.0 9 37.76565615094116 39.0 38.0 39.0 35.0 39.0 10 37.24354187241314 39.0 37.0 39.0 34.0 39.0 11 37.16242505280056 39.0 37.0 39.0 34.0 39.0 12 36.962697470381755 39.0 37.0 39.0 33.0 39.0 13 36.87858276279142 39.0 37.0 39.0 33.0 39.0 14 37.996428795999364 40.0 37.0 41.0 33.0 41.0 15 38.08307256701325 40.0 37.0 41.0 33.0 41.0 16 38.10743479917294 40.0 37.0 41.0 33.0 41.0 17 38.06205498655481 40.0 37.0 41.0 33.0 41.0 18 38.041163165740116 40.0 37.0 41.0 33.0 41.0 19 38.02490503297492 40.0 37.0 41.0 34.0 41.0 20 37.937489134736666 40.0 36.0 41.0 33.0 41.0 21 37.83026516790762 40.0 36.0 41.0 33.0 41.0 22 37.859126081440465 40.0 36.0 41.0 33.0 41.0 23 37.770275043738465 40.0 36.0 41.0 33.0 41.0 24 37.69460565104658 40.0 36.0 41.0 33.0 41.0 25 37.571824476525485 39.0 35.0 41.0 33.0 41.0 26 37.52923449365099 39.0 35.0 41.0 33.0 41.0 27 37.467136046042825 39.0 35.0 41.0 33.0 41.0 28 37.3565554063701 39.0 35.0 41.0 32.0 41.0 29 37.30901086341393 39.0 35.0 41.0 32.0 41.0 30 37.23759048221426 39.0 35.0 41.0 32.0 41.0 31 37.137471010552716 39.0 35.0 41.0 32.0 41.0 32 37.11435250428138 39.0 35.0 41.0 32.0 41.0 33 37.01414888462293 39.0 35.0 41.0 31.0 41.0 34 36.888290297643486 39.0 35.0 41.0 31.0 41.0 35 36.77121361755013 39.0 35.0 41.0 31.0 41.0 36 36.617153430464164 39.0 35.0 41.0 31.0 41.0 37 36.5695617276416 39.0 35.0 41.0 31.0 41.0 38 36.44698306313504 39.0 35.0 41.0 30.0 41.0 39 36.40732716371316 39.0 35.0 40.0 30.0 41.0 40 36.29813357893452 39.0 35.0 40.0 30.0 41.0 41 36.189418990445965 38.0 35.0 40.0 30.0 41.0 42 36.08714588488554 38.0 35.0 40.0 30.0 41.0 43 35.90337035845197 38.0 35.0 40.0 29.0 41.0 44 35.81510188380549 38.0 35.0 40.0 29.0 41.0 45 35.805500689828634 38.0 35.0 40.0 29.0 41.0 46 35.5289413627167 38.0 34.0 40.0 28.0 41.0 47 35.45515651527425 37.0 34.0 40.0 28.0 41.0 48 35.37405541561713 37.0 34.0 40.0 28.0 41.0 49 35.41502254426555 37.0 34.0 40.0 28.0 41.0 50 35.204139341685256 37.0 34.0 40.0 27.0 41.0 51 34.10378869420803 36.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 14.0 10 26.0 11 11.0 12 18.0 13 17.0 14 14.0 15 27.0 16 42.0 17 114.0 18 237.0 19 394.0 20 735.0 21 1277.0 22 2002.0 23 2944.0 24 4369.0 25 6284.0 26 8716.0 27 10876.0 28 13072.0 29 15801.0 30 19516.0 31 24961.0 32 31897.0 33 44741.0 34 74637.0 35 97160.0 36 97392.0 37 140095.0 38 219050.0 39 264866.0 40 115.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.829088945357437 4.562670838927788 52.22344899521744 17.38479122049734 2 19.746945705123224 5.150134821735705 52.67877288178223 22.42414659135883 3 20.63956176462973 5.460372766379269 51.31132169686747 22.588743772123525 4 18.8660733770533 5.203582670321094 50.68261594854211 25.24772800408349 5 17.918529943741053 8.01301612312609 48.4694311595409 25.599022773591955 6 21.946352415509864 7.7295021027752195 52.21540407683174 18.108741404883173 7 84.12118051317333 2.3824054860795174 9.077442048846525 4.418971951900636 8 86.06296489456533 3.150371545770962 6.513609782620756 4.273053777042947 9 80.67388674974201 4.952340793839257 8.593359890811039 5.780412565607696 10 40.6657678550953 27.183039462636437 15.89259756544125 16.25859511682701 11 31.40995054686951 24.555125260303967 23.501333422104846 20.533590770721673 12 27.632167837340997 21.607633610374428 29.99552443620842 20.76467411607615 13 25.042813761064075 23.617846033207943 30.84689873019748 20.4924414755305 14 21.259667772611767 25.749841875742074 30.343027922339722 22.647462429306437 15 19.39148977093251 22.84072541121554 36.26334809159741 21.504436726254543 16 21.28611428592565 21.330037690904987 33.58383544720499 23.800012575964374 17 21.153419367724897 21.63371024238322 30.20866853826607 27.004201851625815 18 23.15891580391852 21.366193588477458 30.709765236335663 24.76512537126836 19 24.97540289321157 24.515547960659426 27.183131932962713 23.325917213166296 20 27.69060908354509 22.64320879429791 28.185232858775617 21.48094926338138 21 27.030740835265966 24.0165780800941 26.673805375854887 22.27887570878505 22 25.18040960655726 22.80577162788461 25.95031754310042 26.063501222457713 23 24.260422330474153 25.231730637638382 25.570726853752628 24.937120178134837 24 24.212430231138825 22.40112148011703 28.815788013626424 24.570660275117714 25 23.67416046190777 23.999840951038813 26.456962460746347 25.869036126307066 26 22.18908702197465 25.315693693893632 26.33887785409662 26.156341430035102 27 22.12167615412214 25.15803178759936 28.419737606202172 24.300554452076327 28 20.285215474354278 25.26936606043121 30.14708330096872 24.298335164245792 29 21.561675858217097 23.49911413427431 28.3468709890996 26.592339018408996 30 23.59213928250424 23.634768102915775 27.899961902225577 24.873130712354406 31 23.236036056029622 25.96400315138872 25.353144176033908 25.44681661654775 32 23.369470736840547 25.480290874658323 25.98138757272791 25.16885081577322 33 23.188783719304475 24.417899296115877 25.597543248371597 26.79577373620805 34 20.567804791442427 25.073328968733932 27.291599625680117 27.06726661414352 35 21.435176451876593 23.379272591425412 27.503264202517414 27.682286754180584 36 22.35322185110798 25.70083260281776 25.562034643083038 26.383910902991232 37 21.625110502039895 26.294307156833373 27.010674774464878 25.069907566661858 38 21.002045443617142 26.10206134851326 26.643197697858756 26.252695510010838 39 21.616510761696574 24.259405156885155 26.22550923408678 27.898574847331492 40 22.723473037502266 22.576630159381857 27.880635604034666 26.81926119908121 41 19.972665771553906 23.19664369703762 27.93676509208195 28.893925439326516 42 21.492692994817965 23.882958458630625 27.585285381920944 27.039063164630473 43 22.104476673435496 23.405256753107928 27.21725348335719 27.273013090099386 44 21.611055012446506 23.86871802838469 27.325721176074598 27.194505783094204 45 21.800526710978446 23.170289654050016 25.770277817848253 29.25890581712329 46 21.44109455275802 24.28779354705075 27.43400392813946 26.837107972051772 47 20.126906275776104 24.406525445984386 29.152472471583867 26.314095806655647 48 20.452309353928324 22.69739640549348 29.274625772589573 27.575668467988624 49 20.400803382194653 22.60991947683988 30.011799213632344 26.977477927333123 50 20.532573597132682 23.309827376394914 27.96487607126873 28.192722955203674 51 19.225690475926275 23.220038689584513 27.368072585507306 30.1861982489819 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 182.0 1 743.0 2 1304.0 3 2986.5 4 4669.0 5 3273.0 6 1877.0 7 1991.5 8 2106.0 9 2135.0 10 2164.0 11 2120.5 12 2077.0 13 1937.0 14 1797.0 15 1763.5 16 1730.0 17 1847.0 18 1964.0 19 2184.0 20 2404.0 21 2384.0 22 2364.0 23 2583.5 24 2803.0 25 3829.0 26 6070.0 27 7285.0 28 8764.5 29 10244.0 30 12299.0 31 14354.0 32 16693.5 33 19033.0 34 21590.0 35 24147.0 36 25368.5 37 26590.0 38 30325.5 39 34061.0 40 38805.5 41 43550.0 42 47630.0 43 51710.0 44 56578.0 45 61446.0 46 66429.5 47 71413.0 48 82066.0 49 92719.0 50 99657.5 51 106596.0 52 103212.0 53 99828.0 54 88693.5 55 77559.0 56 72248.5 57 66938.0 58 60831.0 59 54724.0 60 52029.5 61 49335.0 62 44952.5 63 40570.0 64 35226.0 65 29882.0 66 25396.5 67 20911.0 68 18386.5 69 15862.0 70 13561.5 71 11261.0 72 9543.5 73 7826.0 74 6384.0 75 3976.5 76 3011.0 77 2400.0 78 1789.0 79 1312.5 80 836.0 81 609.5 82 383.0 83 303.0 84 223.0 85 150.5 86 78.0 87 47.0 88 16.0 89 10.0 90 4.0 91 3.0 92 2.0 93 1.5 94 1.0 95 2.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1081428.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.71900478475586 #Duplication Level Percentage of deduplicated Percentage of total 1 75.73481842035417 22.50763431007122 2 10.73408242802288 6.380124940767515 3 3.763983393705633 3.355855214618379 4 1.729781055299515 2.0562948583610527 5 0.9466690484795206 1.4067030990671574 6 0.6333103471434021 1.1292811942194094 7 0.44871770933909083 0.9334810625597191 8 0.3267061021723118 0.7767504170934296 9 0.2563715218509047 0.6857195836105962 >10 4.2061284405546635 33.8174800169958 >50 1.1350703685580297 21.096934393658426 >100 0.08009742335281177 4.085173497129657 >500 0.0021318705835273997 0.4595197927303211 >1k 0.0021318705835273997 1.3090476191173201 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCTACCCTCTCGTATGCCGTCTTCTGC 2638 0.24393672070632533 TruSeq Adapter, Index 16 (100% over 23bp) CCTGTCTCTTATACACATCTGACGCCTACCCTCTCGTATGCCGTCTTCTGC 2514 0.23247040024856025 TruSeq Adapter, Index 16 (100% over 23bp) CTGTCTCTTATACACATCTGACGCCTACCCTCTCGTATGCCGTCTTCTGCT 2463 0.227754413608673 TruSeq Adapter, Index 16 (96% over 25bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2350 0.2173052667399032 No Hit TCTGTCTCTTATACACATCTGACGCCTACCCTCTCGTATGCCGTCTTCTGC 2288 0.2115721065110206 TruSeq Adapter, Index 16 (100% over 23bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCCTACCCTCTCGTATGC 1187 0.10976227728521917 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.26566724738031566 0.0 2 0.0 0.0 0.0 1.095218544369112 0.0 3 0.0 0.0 0.0 1.5416652796117727 0.0 4 0.0 0.0 0.0 2.059499106736648 0.0 5 0.0 0.0 0.0 2.971996286391697 0.0 6 0.0 0.0 0.0 3.535510454695088 0.0 7 0.0 0.0 0.0 4.095510750600132 0.0 8 0.0 0.0 0.0 4.997466313060139 0.0 9 0.0 0.0 0.0 5.493569613511024 0.0 10 0.0 0.0 0.0 6.431496132890955 0.0 11 0.0 0.0 0.0 7.7675074068731345 0.0 12 0.0 0.0 0.0 9.151510780190637 0.0 13 0.0 0.0 0.0 9.543584963585186 0.0 14 0.0 0.0 0.0 9.6757250598283 0.0 15 0.0 0.0 0.0 9.921696127712616 0.0 16 9.247032627229922E-5 0.0 0.0 10.443783589846019 0.0 17 9.247032627229922E-5 0.0 0.0 11.201023091689876 0.0 18 9.247032627229922E-5 0.0 0.0 11.998579655788458 0.0 19 9.247032627229922E-5 0.0 0.0 12.514194195082798 0.0 20 9.247032627229922E-5 0.0 0.0 13.066242042928424 0.0 21 9.247032627229922E-5 0.0 0.0 13.80609712343309 0.0 22 9.247032627229922E-5 0.0 0.0 14.586639147497568 0.0 23 9.247032627229922E-5 0.0 0.0 15.35774919828227 0.0 24 9.247032627229922E-5 0.0 0.0 15.96176536949293 0.0 25 9.247032627229922E-5 0.0 0.0 16.465913588329506 0.0 26 9.247032627229922E-5 0.0 0.0 16.890722267224447 0.0 27 9.247032627229922E-5 0.0 0.0 17.349097674556234 0.0 28 1.8494065254459844E-4 0.0 0.0 17.81144930591773 0.0 29 1.8494065254459844E-4 0.0 0.0 18.299322747330383 0.0 30 1.8494065254459844E-4 0.0 0.0 18.89806810994352 0.0 31 1.8494065254459844E-4 0.0 0.0 19.415347115110762 0.0 32 1.8494065254459844E-4 0.0 0.0 19.922731795366868 0.0 33 1.8494065254459844E-4 0.0 0.0 20.42484566702545 0.0 34 1.8494065254459844E-4 0.0 0.0 20.91503086659491 0.0 35 1.8494065254459844E-4 0.0 0.0 21.484463135779727 0.0 36 1.8494065254459844E-4 0.0 0.0 21.996656273001992 0.0 37 1.8494065254459844E-4 0.0 0.0 22.516709387957405 0.0 38 1.8494065254459844E-4 0.0 0.0 23.016234090480364 0.0 39 2.7741097881689767E-4 0.0 0.0 23.546089060020638 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAATCG 25 3.890651E-5 45.000004 34 TGTACGA 25 3.890651E-5 45.000004 21 ACGTTAT 20 7.0331024E-4 45.0 28 ATAGCGC 20 7.0331024E-4 45.0 36 CGATTAT 20 7.0331024E-4 45.0 10 TCGCTAT 20 7.0331024E-4 45.0 39 CGGTAAG 20 7.0331024E-4 45.0 20 AGCTACG 140 0.0 45.0 9 GCTACGA 150 0.0 42.0 10 TACGAAT 145 0.0 41.89655 12 TTACGCG 60 3.6379788E-12 41.250004 1 TTCCGAA 55 6.184564E-11 40.909092 44 TACGCGG 95 0.0 40.26316 2 CGTTTGG 740 0.0 39.83108 2 TCGTTCA 125 0.0 39.600002 16 TACGGGA 205 0.0 39.512196 4 TCCGATA 40 3.4579716E-7 39.375 14 TCGTACA 40 3.4579716E-7 39.375 34 ATACTAT 605 0.0 38.67769 45 TTTGGGC 2940 0.0 38.112244 4 >>END_MODULE