##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933142.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 618012 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.12592959360013 33.0 31.0 34.0 30.0 34.0 2 32.30893413072885 34.0 31.0 34.0 30.0 34.0 3 32.39067849815214 34.0 31.0 34.0 30.0 34.0 4 35.88446664466062 37.0 35.0 37.0 35.0 37.0 5 35.14607159731526 37.0 35.0 37.0 35.0 37.0 6 34.82827841530585 37.0 35.0 37.0 32.0 37.0 7 35.634007106658125 37.0 35.0 37.0 33.0 37.0 8 35.89612823051979 37.0 35.0 37.0 35.0 37.0 9 37.77127790398892 39.0 38.0 39.0 35.0 39.0 10 37.26719060471318 39.0 37.0 39.0 34.0 39.0 11 37.15850339475609 39.0 37.0 39.0 34.0 39.0 12 36.88100069254319 39.0 35.0 39.0 33.0 39.0 13 36.73246150560183 39.0 35.0 39.0 33.0 39.0 14 37.82563283560837 40.0 36.0 41.0 33.0 41.0 15 37.94418231361203 40.0 36.0 41.0 33.0 41.0 16 37.98061040885938 40.0 36.0 41.0 33.0 41.0 17 37.93991055189867 40.0 36.0 41.0 33.0 41.0 18 37.91252273418639 40.0 36.0 41.0 33.0 41.0 19 37.924376872940975 40.0 36.0 41.0 34.0 41.0 20 37.83755007993372 40.0 36.0 41.0 33.0 41.0 21 37.69016459227329 39.0 36.0 41.0 33.0 41.0 22 37.74861329553472 39.0 36.0 41.0 33.0 41.0 23 37.68421486961418 39.0 35.0 41.0 33.0 41.0 24 37.65196468676984 39.0 35.0 41.0 33.0 41.0 25 37.53717565354718 39.0 35.0 41.0 33.0 41.0 26 37.48052950428147 39.0 35.0 41.0 33.0 41.0 27 37.38913322071416 39.0 35.0 41.0 33.0 41.0 28 37.308736723558766 39.0 35.0 41.0 33.0 41.0 29 37.2393934098367 39.0 35.0 41.0 32.0 41.0 30 37.13130974803078 39.0 35.0 41.0 32.0 41.0 31 37.07951787343935 39.0 35.0 41.0 32.0 41.0 32 37.04322731597445 39.0 35.0 41.0 32.0 41.0 33 36.91931062827259 39.0 35.0 41.0 31.0 41.0 34 36.83650155660408 39.0 35.0 41.0 31.0 41.0 35 36.71288259774891 39.0 35.0 41.0 31.0 41.0 36 36.54657838359126 39.0 35.0 40.0 31.0 41.0 37 36.483019747189374 39.0 35.0 40.0 31.0 41.0 38 36.404628065474455 38.0 35.0 40.0 30.0 41.0 39 36.36874526708219 38.0 35.0 40.0 30.0 41.0 40 36.33014569296389 38.0 35.0 40.0 30.0 41.0 41 36.27728425985256 38.0 35.0 40.0 30.0 41.0 42 36.198331100366985 38.0 35.0 40.0 30.0 41.0 43 35.99600331385151 38.0 35.0 40.0 30.0 41.0 44 35.898877368076995 38.0 35.0 40.0 30.0 41.0 45 35.87119182151803 38.0 35.0 40.0 30.0 41.0 46 35.643794942493024 38.0 34.0 40.0 29.0 41.0 47 35.58956460392355 38.0 34.0 40.0 29.0 41.0 48 35.50779272894378 38.0 34.0 40.0 28.0 41.0 49 35.58983644330531 37.0 34.0 40.0 29.0 41.0 50 35.365476722134844 37.0 34.0 40.0 28.0 41.0 51 34.32489984013255 36.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 8.0 10 16.0 11 16.0 12 9.0 13 10.0 14 16.0 15 16.0 16 36.0 17 65.0 18 101.0 19 233.0 20 399.0 21 692.0 22 1067.0 23 1586.0 24 2334.0 25 3392.0 26 4630.0 27 5858.0 28 7348.0 29 8698.0 30 11175.0 31 13959.0 32 18736.0 33 26094.0 34 45415.0 35 61546.0 36 54406.0 37 78822.0 38 125016.0 39 146245.0 40 64.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.113408801123605 4.794405286628738 51.6020724516676 17.490113460580055 2 20.610117602894444 4.761396218843647 52.60771635502223 22.02076982323968 3 21.441654854598294 4.694730846650227 51.78362232448561 22.079991974265873 4 19.374866507446455 4.426289457162643 51.04496352821628 25.15388050717462 5 17.342705319637805 7.939813466405184 50.52005462677101 24.197426587186012 6 21.442302091221528 7.856643560319217 53.21077907872339 17.490275269735864 7 82.8684556286933 2.0009320207374612 10.258538669152054 4.872073681417189 8 84.46146676763559 2.6324731558610512 8.001624563924326 4.9044355125790435 9 78.93341876856759 4.941489809259368 10.296078393299807 5.829013028873225 10 41.14758289483052 25.363261554791816 17.434289301825853 16.054866248551807 11 31.936758509543505 24.249690944512402 24.627515323327053 19.186035222617036 12 27.465486107065885 21.3039552630046 31.531588383397086 19.69897024653243 13 23.317832016206804 25.398535950758237 32.42655482417817 18.857077208856786 14 19.85867588331618 27.797356685630696 31.70682769913853 20.63713973191459 15 17.85709662595548 23.59954175647075 38.446664466062145 20.096697151511624 16 19.291696601360492 22.113486469518392 35.08637372737099 23.50844320175013 17 19.48700025242228 21.6092891400167 29.78259321825466 29.121117389306356 18 20.81108457440956 21.73113143434108 33.582195814967996 23.87558817628137 19 23.54824825407921 23.160068089292764 30.31607800495783 22.975605651670193 20 26.239134515187406 23.24760684258558 28.89183381552462 21.62142482670239 21 24.576545439247134 24.887542636712556 29.536966919736184 20.998945004304122 22 23.912966091273308 22.52043649637871 28.620479861232468 24.946117551115513 23 21.307029636964977 25.30080322064944 27.540403746205577 25.85176339618001 24 22.627877775836065 22.48726561943781 30.886778897497138 23.998077707228983 25 20.914157006660066 23.907626389131604 29.437454288913482 25.740762315294845 26 21.11124055843576 25.49643049002285 28.78989404736478 24.60243490417662 27 20.318699313281943 25.64691300492547 30.26980058639638 23.764587095396205 28 19.25059707578494 23.938531937891174 32.30778690381417 24.503084082509723 29 20.011909153867563 23.675915678012725 30.819304479524668 25.492870688595044 30 21.216416509711784 25.9982006821874 30.431124314738224 22.35425849336259 31 22.87382769266616 25.842054846831452 27.25788496016259 24.026232500339802 32 22.981592590435138 26.500132683507765 25.917457913438575 24.600816812618525 33 22.21413176443176 25.610344135712577 26.79009469071798 25.38542940913769 34 20.909626350297405 23.70439408943516 28.920797654414475 26.46518190585296 35 20.655747784832656 24.356484987346523 28.197672537102843 26.79009469071798 36 23.153919341372013 24.305029675799176 28.702355294071957 23.838695688756854 37 19.824534151440425 26.148197769622595 30.082263774813434 23.945004304123543 38 18.828275179122738 28.8025151615179 27.016303890539344 25.352905768820023 39 19.94168398024634 27.21727086205446 28.5617431376737 24.2793020200255 40 21.63841478806237 23.627211122114133 29.755894707546133 24.978479382277367 41 19.2342543510482 22.88563976104024 28.952026821485667 28.928079066425894 42 21.34845278085215 22.072225134787026 27.24316032698394 29.33616175737688 43 21.34456936111273 22.870753318705788 28.176151919380203 27.60852540080128 44 20.62888746496832 24.144676802392187 28.469997346329844 26.75643838630965 45 20.94635702866611 24.885600926842844 27.631178682614575 26.536863361876467 46 22.22028051235251 24.34677643799797 29.459783952415165 23.97315909723436 47 19.397196170948135 24.037882759558066 30.55248118159518 26.01243988789862 48 19.523892739946795 23.200196759933466 30.71283405500217 26.563076445117574 49 21.099266680905874 21.764949547905218 31.471233568280226 25.664550202908682 50 20.238118353688925 23.286926467447234 29.80039222539368 26.67456295347016 51 18.95885516786082 23.051170527433122 27.499627838941638 30.490346465764418 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 94.0 1 377.5 2 661.0 3 1907.5 4 3154.0 5 2067.5 6 981.0 7 1029.5 8 1078.0 9 1160.0 10 1242.0 11 1285.0 12 1328.0 13 1356.5 14 1385.0 15 1421.0 16 1457.0 17 1516.5 18 1576.0 19 1574.0 20 1572.0 21 1764.5 22 1957.0 23 1856.0 24 1755.0 25 2551.0 26 4057.5 27 4768.0 28 5246.0 29 5724.0 30 7127.5 31 8531.0 32 9389.0 33 10247.0 34 11759.5 35 13272.0 36 14648.0 37 16024.0 38 18332.0 39 20640.0 40 23956.0 41 27272.0 42 32385.0 43 37498.0 44 42005.0 45 46512.0 46 52588.0 47 58664.0 48 64345.5 49 70027.0 50 68144.5 51 66262.0 52 56572.0 53 46882.0 54 41317.5 55 35753.0 56 33182.0 57 30611.0 58 27649.0 59 24687.0 60 22150.5 61 19614.0 62 18197.0 63 16780.0 64 14686.0 65 12592.0 66 10586.0 67 8580.0 68 6937.5 69 5295.0 70 4834.5 71 4374.0 72 3499.5 73 2625.0 74 2086.0 75 1209.5 76 872.0 77 656.5 78 441.0 79 313.5 80 186.0 81 153.5 82 121.0 83 68.0 84 15.0 85 9.5 86 4.0 87 2.5 88 1.0 89 1.5 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 618012.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.967713870811398 #Duplication Level Percentage of deduplicated Percentage of total 1 73.2422516483104 22.681450922988404 2 11.569781397494731 7.165793597309064 3 4.600800804471216 4.274288486683905 4 2.146133763025695 2.6584342520746986 5 1.1920182762313216 1.8457040453554694 6 0.7917478818763731 1.47111731182611 7 0.5374979168690308 1.1651557187030122 8 0.39025924229507186 0.9668349240666754 9 0.2993303925308113 0.8342620153858641 >10 4.419381997901645 36.59260324771884 >50 0.7248188820567604 13.789030936074756 >100 0.08233025403662772 4.333156014211056 >500 0.0010421551143876926 0.24414646592564432 >1k 0.0026053877859692313 1.9780220616765025 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCTGCT 2861 0.4629359947703281 TruSeq Adapter, Index 22 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCTGC 2589 0.418923904390206 TruSeq Adapter, Index 20 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCTGC 2504 0.4051701261464179 TruSeq Adapter, Index 20 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCTGC 2442 0.395137958486243 TruSeq Adapter, Index 20 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1862 0.301288648116865 No Hit TCCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCTG 849 0.13737597328207218 No Hit GCCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCTG 664 0.10744127945735682 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.618091558092723E-4 0.0 0.0 0.506300848527213 0.0 2 1.618091558092723E-4 0.0 0.0 1.8625851925205337 0.0 3 1.618091558092723E-4 0.0 0.0 2.560953508993353 0.0 4 1.618091558092723E-4 0.0 0.0 3.3047901982485777 0.0 5 1.618091558092723E-4 0.0 0.0 4.545542804994078 0.0 6 1.618091558092723E-4 0.0 0.0 5.303133272493091 0.0 7 1.618091558092723E-4 0.0 0.0 6.023184015844352 0.0 8 1.618091558092723E-4 0.0 0.0 7.213128547665741 0.0 9 1.618091558092723E-4 0.0 0.0 7.8924033837530665 0.0 10 1.618091558092723E-4 0.0 0.0 9.137039410237989 0.0 11 1.618091558092723E-4 0.0 0.0 11.084412600402581 0.0 12 1.618091558092723E-4 0.0 0.0 12.851044963528217 0.0 13 1.618091558092723E-4 0.0 0.0 13.42368756593723 0.0 14 1.618091558092723E-4 0.0 0.0 13.626758056477868 0.0 15 1.618091558092723E-4 0.0 0.0 13.952156268810315 0.0 16 1.618091558092723E-4 0.0 0.0 14.689520591833169 0.0 17 1.618091558092723E-4 0.0 0.0 15.775421836469194 0.0 18 1.618091558092723E-4 0.0 0.0 17.04174028983256 0.0 19 1.618091558092723E-4 0.0 0.0 17.814055390510216 0.0 20 1.618091558092723E-4 0.0 0.0 18.601580551833944 0.0 21 1.618091558092723E-4 0.0 0.0 19.611916920707042 0.0 22 1.618091558092723E-4 0.0 0.0 20.58600803867886 0.0 23 1.618091558092723E-4 0.0 0.0 21.618835880209446 0.0 24 1.618091558092723E-4 0.0 0.0 22.404257522507653 0.0 25 1.618091558092723E-4 0.0 0.0 23.085312259308882 0.0 26 1.618091558092723E-4 0.0 0.0 23.66620712866417 0.0 27 1.618091558092723E-4 0.0 0.0 24.249043707889168 0.0 28 1.618091558092723E-4 0.0 0.0 24.868287347171254 0.0 29 1.618091558092723E-4 0.0 0.0 25.52911593949632 0.0 30 1.618091558092723E-4 0.0 0.0 26.301431040173977 0.0 31 1.618091558092723E-4 0.0 0.0 26.97471893749636 0.0 32 1.618091558092723E-4 0.0 0.0 27.560953508993354 0.0 33 1.618091558092723E-4 0.0 0.0 28.167899652433935 0.0 34 1.618091558092723E-4 0.0 0.0 28.76918247542119 0.0 35 3.236183116185446E-4 0.0 0.0 29.44311760936681 0.0 36 3.236183116185446E-4 0.0 0.0 30.04488585982149 0.0 37 3.236183116185446E-4 0.0 0.0 30.697947612667715 0.0 38 3.236183116185446E-4 0.0 0.0 31.30181938214792 0.0 39 3.236183116185446E-4 0.0 0.0 31.89533536565633 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAACGT 20 7.0307514E-4 45.000004 12 CTCCGTA 20 7.0307514E-4 45.000004 16 CTATACG 20 7.0307514E-4 45.000004 1 ATTCGAT 20 7.0307514E-4 45.000004 37 CGACATA 20 7.0307514E-4 45.000004 2 TGCGGTA 20 7.0307514E-4 45.000004 4 CGCGAGT 20 7.0307514E-4 45.000004 17 CGACAAG 20 7.0307514E-4 45.000004 22 ACGATAC 20 7.0307514E-4 45.000004 45 ACGGCTT 20 7.0307514E-4 45.000004 19 GTTCGAC 20 7.0307514E-4 45.000004 37 TAATTCG 20 7.0307514E-4 45.000004 24 CGTACTT 20 7.0307514E-4 45.000004 15 AACCTCG 20 7.0307514E-4 45.000004 38 TATACGG 20 7.0307514E-4 45.000004 2 AATACGG 20 7.0307514E-4 45.000004 27 TCGGTAC 20 7.0307514E-4 45.000004 36 TACGTAC 20 7.0307514E-4 45.000004 13 CGGGTCG 25 3.888705E-5 45.0 6 AACCGCG 25 3.888705E-5 45.0 26 >>END_MODULE