##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933140.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2264573 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.272971107577455 33.0 31.0 34.0 30.0 34.0 2 32.464697759798426 34.0 31.0 34.0 31.0 34.0 3 32.5230337021593 34.0 31.0 34.0 31.0 34.0 4 35.99821909030974 37.0 35.0 37.0 35.0 37.0 5 35.23901238776582 37.0 35.0 37.0 35.0 37.0 6 34.91574923837739 37.0 35.0 37.0 32.0 37.0 7 35.68344098423853 37.0 35.0 37.0 35.0 37.0 8 35.964886978693116 37.0 35.0 37.0 35.0 37.0 9 37.84162577227583 39.0 38.0 39.0 35.0 39.0 10 37.38103607170093 39.0 37.0 39.0 35.0 39.0 11 37.27854831793897 39.0 37.0 39.0 34.0 39.0 12 37.03815112164633 39.0 37.0 39.0 33.0 39.0 13 36.93981646871176 39.0 37.0 39.0 33.0 39.0 14 37.93994055391458 40.0 37.0 41.0 33.0 41.0 15 38.07642853641724 40.0 37.0 41.0 33.0 41.0 16 38.13672997072737 40.0 37.0 41.0 33.0 41.0 17 38.09204295909207 40.0 37.0 41.0 33.0 41.0 18 38.03835689995421 40.0 37.0 41.0 33.0 41.0 19 38.00564698068907 40.0 37.0 41.0 33.0 41.0 20 37.875651612908925 40.0 36.0 41.0 33.0 41.0 21 37.76349227867682 40.0 36.0 41.0 33.0 41.0 22 37.831490086652096 40.0 36.0 41.0 33.0 41.0 23 37.7659426302442 40.0 35.0 41.0 33.0 41.0 24 37.70013817174364 40.0 35.0 41.0 33.0 41.0 25 37.5730002963031 39.0 35.0 41.0 33.0 41.0 26 37.537391375769296 39.0 35.0 41.0 33.0 41.0 27 37.49557775351026 39.0 35.0 41.0 33.0 41.0 28 37.379705578049375 39.0 35.0 41.0 33.0 41.0 29 37.293968885083416 39.0 35.0 41.0 33.0 41.0 30 37.178966189210946 39.0 35.0 41.0 32.0 41.0 31 37.03645587932029 39.0 35.0 41.0 32.0 41.0 32 36.95842483329087 39.0 35.0 41.0 32.0 41.0 33 36.789744909967574 39.0 35.0 41.0 31.0 41.0 34 36.55987994204647 39.0 35.0 41.0 31.0 41.0 35 36.39036630746723 39.0 35.0 41.0 30.0 41.0 36 36.24364681553653 39.0 35.0 41.0 30.0 41.0 37 36.20319018199016 39.0 35.0 41.0 30.0 41.0 38 36.064689899596964 38.0 35.0 40.0 30.0 41.0 39 35.99987900588764 38.0 35.0 40.0 30.0 41.0 40 35.868973974343064 38.0 35.0 40.0 29.0 41.0 41 35.72722054003117 38.0 35.0 40.0 29.0 41.0 42 35.658663686266685 38.0 35.0 40.0 29.0 41.0 43 35.54551167041204 38.0 35.0 40.0 28.0 41.0 44 35.46414312985274 38.0 34.0 40.0 28.0 41.0 45 35.45816584406862 38.0 34.0 40.0 29.0 41.0 46 35.29037527162957 37.0 34.0 40.0 28.0 41.0 47 35.18128759814764 37.0 34.0 40.0 28.0 41.0 48 35.074232537436416 37.0 34.0 40.0 27.0 41.0 49 35.108026104700535 37.0 34.0 40.0 28.0 41.0 50 34.924777872031505 37.0 34.0 40.0 27.0 41.0 51 33.816318573081986 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 10.0 9 27.0 10 57.0 11 50.0 12 36.0 13 48.0 14 58.0 15 79.0 16 163.0 17 324.0 18 617.0 19 1084.0 20 1862.0 21 3130.0 22 4679.0 23 7078.0 24 10791.0 25 16332.0 26 22652.0 27 27025.0 28 30662.0 29 34224.0 30 40786.0 31 51439.0 32 67539.0 33 97491.0 34 164939.0 35 184381.0 36 205509.0 37 294885.0 38 452440.0 39 543970.0 40 206.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.023116057640888 4.2587719627497105 53.16759495057125 18.550517029038147 2 21.943209602869945 4.540679412851783 51.850392987993764 21.66571799628451 3 20.863182595570997 4.645953122288396 52.1185671647591 22.37229711738151 4 18.5083015650191 4.874958767061163 52.058335059192174 24.55840460872756 5 17.85758286440755 7.565576380182931 49.8221077439323 24.75473301147722 6 22.245694883759544 7.4667498022806065 52.47099563582185 17.816559678137995 7 83.33478320195464 2.164337382809033 10.349633242116726 4.151246173119612 8 85.94600394864727 2.5444090342859336 8.147363763499786 3.362223253567008 9 80.5598229776651 4.5890770577941185 10.057348559750558 4.7937514047902186 10 41.88467318121341 26.013601681199944 16.492822267155884 15.60890287043076 11 32.74511353796058 23.346520514021847 24.51137587527538 19.39699007274219 12 28.08714932130693 20.38344535592361 30.538163265216 20.991242057553457 13 25.855823592350525 20.323301567227023 32.93495065074078 20.885924189681678 14 22.2471962705552 21.63772154838903 34.50831569571836 21.60676648533741 15 21.100843293636373 20.40159447277699 35.720155631988895 22.77740660159774 16 25.178653989074316 19.915630893771144 32.287499674331535 22.618215442822994 17 24.805382736613037 19.916072478122807 30.600117549754412 24.67842723550974 18 26.05144546013752 19.79181064156466 30.603252798651226 23.5534910996466 19 26.061646058660948 22.647183376292134 28.56662161034332 22.724548954703604 20 27.438196958102033 24.290407065702894 27.71727826835346 20.55411770784161 21 27.116149490433738 23.503415434167945 28.61016182741735 20.770273247980967 22 24.92597942305238 21.281672085642636 29.50825608183088 24.284092409474102 23 24.200191382658012 23.070353660491406 28.828083704963365 23.90137125188722 24 23.846261524799598 22.964020148610796 29.444049717098984 23.745668609490618 25 25.548966626379453 23.138843393434435 26.98115715413016 24.33103282605595 26 23.178674301954498 23.071457621370563 27.900138348377375 25.849729728297564 27 23.04995246344454 21.650085910235617 29.748654602876567 25.55130702344327 28 21.38827054813424 24.153162649205832 28.829055190537023 25.6295116121229 29 23.544791887918826 23.24217413172373 28.346535969474157 24.866498010883287 30 25.445856680265994 21.45411077496729 29.856401184682497 23.24363136008422 31 25.131625255622144 23.67788541151025 27.8625595200508 23.32792981281681 32 26.20785463749678 23.10104377293203 27.20031546786083 23.49078612171036 33 25.982823251888988 22.783058881299034 26.68087979499888 24.553238071813098 34 23.9191229428241 23.362461709116904 29.535281044152693 23.1831343039063 35 23.917135813241615 24.091429156843255 28.43538274102888 23.55605228888625 36 25.227846485849646 25.760794639872508 26.28588259243575 22.7254762818421 37 25.022642237631555 26.123291234153196 25.9808361223065 22.87323040590875 38 25.169822302041045 24.81213897719349 27.71255331579066 22.3054854049748 39 25.59520050799864 22.78018858301322 27.188216056625247 24.4363948523629 40 26.505217539907083 21.86323867678366 29.2085086239216 22.423035159387663 41 23.181765392416143 22.852652575121226 28.735350991114 25.230231041348635 42 23.585064380790552 23.048539393519217 28.87272788291656 24.49366834277367 43 23.71237314937518 22.100192839886372 29.036864786429938 25.150569224308512 44 24.265104282352567 22.676195468196433 28.189729366198396 24.868970883252604 45 23.763067032946168 21.886466013681165 27.56471087485367 26.785756078518997 46 23.382907064598935 22.611415043807376 28.479452859324915 25.52622503226878 47 21.794572310099962 23.973570293384228 30.364046555355028 23.867810841160782 48 22.592780184167168 24.233266050597617 29.023617255880023 24.150336509355185 49 24.375765320879477 23.035998397931973 28.804149833103192 23.784086448085358 50 23.00954749526732 22.772725807470106 28.486871476432864 25.730855220829714 51 22.31109352624093 22.703617856434747 28.00042215464019 26.98486646268414 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 522.0 1 1619.5 2 2717.0 3 13969.5 4 25222.0 5 16513.5 6 7805.0 7 7566.5 8 7328.0 9 7313.5 10 7299.0 11 7187.5 12 7076.0 13 6914.5 14 6753.0 15 6455.0 16 6157.0 17 6010.5 18 5864.0 19 5748.5 20 5633.0 21 6129.0 22 6625.0 23 7210.5 24 7796.0 25 8915.0 26 12226.5 27 14419.0 28 17331.0 29 20243.0 30 23494.5 31 26746.0 32 31149.0 33 35552.0 34 41260.5 35 46969.0 36 49683.0 37 52397.0 38 57522.0 39 62647.0 40 68697.5 41 74748.0 42 82250.0 43 89752.0 44 102673.0 45 115594.0 46 135478.5 47 155363.0 48 176128.5 49 196894.0 50 198729.0 51 200564.0 52 188697.5 53 176831.0 54 167505.5 55 158180.0 56 151596.0 57 145012.0 58 137291.5 59 129571.0 60 121939.0 61 114307.0 62 104263.5 63 94220.0 64 83935.0 65 73650.0 66 64542.0 67 55434.0 68 47681.5 69 39929.0 70 34232.5 71 28536.0 72 24474.0 73 20412.0 74 17151.5 75 11202.0 76 8513.0 77 6243.0 78 3973.0 79 2962.5 80 1952.0 81 1402.0 82 852.0 83 633.0 84 414.0 85 261.5 86 109.0 87 67.5 88 26.0 89 21.0 90 16.0 91 12.0 92 8.0 93 10.5 94 13.0 95 8.0 96 3.0 97 2.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2264573.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.22496039628834 #Duplication Level Percentage of deduplicated Percentage of total 1 73.9746225716066 20.139561698423673 2 9.85696303780179 5.367108566636635 3 3.5711074987240234 2.9166978067094957 4 1.827483393762981 1.9901265208028707 5 1.0784121233214665 1.4679863674152072 6 0.7897841100445219 1.2901104670547963 7 0.546764091658169 1.0419941519054352 8 0.43174397864908076 0.9403370176045746 9 0.381540943336544 0.9348693364709911 >10 6.886829559399857 47.885565494450944 >50 0.5675346781745915 9.408603585209418 >100 0.08056932682744292 3.9628094179638724 >500 0.003986812015793601 0.7999004650468233 >1k 0.0024917575098710003 1.1818284023635206 >5k 0.0 0.0 >10k+ 1.6611716732473336E-4 0.672500701941893 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14870 0.6566359309238431 No Hit CTGTCTCTTATACACATCTGACGCTCAGTGTGTCGTATGCCGTCTTCTGCT 3408 0.1504919470469709 TruSeq Adapter, Index 15 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCTCAGTGTGTCGTATGCCGTCTTCTGC 3274 0.144574716734678 TruSeq Adapter, Index 14 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTCAGTGTGTCGTATGCCGTCTTCTGC 2517 0.11114678131373994 TruSeq Adapter, Index 14 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCTCAGTGTGTCGTATGCCGTCTTCTGC 2283 0.10081370748481061 TruSeq Adapter, Index 14 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.091090461645529E-4 0.0 0.0 0.16131076366273023 0.0 2 3.091090461645529E-4 0.0 0.0 0.5565287584016942 0.0 3 3.091090461645529E-4 0.0 0.0 0.8430286857610684 0.0 4 3.091090461645529E-4 0.0 0.0 1.1956337905644905 0.0 5 3.091090461645529E-4 0.0 0.0 1.861896260354601 0.0 6 3.974259164972823E-4 0.0 0.0 2.6003136132065516 0.0 7 3.974259164972823E-4 0.0 0.0 3.2093467510210534 0.0 8 3.974259164972823E-4 0.0 0.0 4.083462975139242 0.0 9 3.974259164972823E-4 0.0 0.0 4.662689169216448 0.0 10 4.857427868300117E-4 0.0 0.0 5.525015091145218 0.0 11 4.857427868300117E-4 0.0 0.0 6.755401570185637 0.0 12 4.857427868300117E-4 0.0 0.0 7.872035920237502 0.0 13 4.857427868300117E-4 0.0 0.0 8.248663213771426 0.0 14 4.857427868300117E-4 0.0 0.0 8.433068839026165 0.0 15 4.857427868300117E-4 0.0 0.0 8.632664965978133 0.0 16 4.857427868300117E-4 0.0 0.0 9.043294254590158 0.0 17 4.857427868300117E-4 0.0 0.0 9.567278246274242 0.0 18 4.857427868300117E-4 0.0 0.0 10.140101467252325 0.0 19 5.299012219963764E-4 0.0 0.0 10.552143825789674 0.0 20 5.74059657162741E-4 0.0 0.0 11.012142244917696 0.0 21 6.182180923291058E-4 0.0 0.0 11.629079742626976 0.0 22 6.623765274954705E-4 0.0 0.0 12.308943010448328 0.0 23 6.623765274954705E-4 0.0 0.0 12.947341507648462 0.0 24 6.623765274954705E-4 0.0 0.0 13.467395398602738 0.0 25 6.623765274954705E-4 0.0 0.0 13.92059341871514 0.0 26 7.065349626618351E-4 0.0 0.0 14.322567654034557 0.0 27 7.065349626618351E-4 0.0 0.0 14.755055368053933 0.0 28 7.065349626618351E-4 0.0 0.0 15.185158526574325 0.0 29 7.065349626618351E-4 0.0 0.0 15.684811220481741 0.0 30 7.065349626618351E-4 0.0 0.0 16.313980604732105 0.0 31 7.065349626618351E-4 0.0 0.0 16.783605562726393 0.0 32 7.065349626618351E-4 0.0 0.0 17.26312201019795 0.0 33 7.065349626618351E-4 0.0 0.0 17.73963568407819 0.0 34 7.065349626618351E-4 0.0 0.0 18.238714318328444 0.0 35 7.065349626618351E-4 0.0 0.0 18.841079532432826 0.0 36 7.065349626618351E-4 0.0 0.0 19.337199551526933 0.0 37 7.065349626618351E-4 0.0 0.0 19.834688482111197 0.0 38 7.065349626618351E-4 0.0 0.0 20.433830130448435 0.0 39 7.065349626618351E-4 0.0 0.0 21.41255768747574 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTGCG 120 0.0 41.249996 1 AACGTAT 55 6.184564E-11 40.909092 31 CGTTTTT 7505 0.0 40.892742 1 ACGTATA 45 1.9297659E-8 40.0 32 TACGAAT 260 0.0 38.942307 12 TTTGGGA 10350 0.0 38.152172 4 AACACGT 1705 0.0 37.8739 41 TCGTTTG 785 0.0 37.834396 1 GTATGCG 30 1.1402719E-4 37.499996 1 CGTCGAT 30 1.1402719E-4 37.499996 40 TGCGTAT 30 1.1402719E-4 37.499996 20 CGAATAT 265 0.0 37.35849 14 TCAAGCG 1935 0.0 37.32558 17 TGGGAAC 2975 0.0 37.285713 6 CGAGACA 1920 0.0 37.26562 22 ACGACCA 1840 0.0 37.173912 28 TTGGGAT 4770 0.0 37.0283 5 AAACACG 1785 0.0 36.80672 40 ACACGCG 1670 0.0 36.781437 36 GTCAAGC 1990 0.0 36.74623 16 >>END_MODULE