##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933138.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1152524 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.27407932502924 33.0 31.0 34.0 30.0 34.0 2 32.45491547247606 34.0 31.0 34.0 31.0 34.0 3 32.532404531272235 34.0 31.0 34.0 31.0 34.0 4 35.985195102227806 37.0 35.0 37.0 35.0 37.0 5 35.196216304389324 37.0 35.0 37.0 35.0 37.0 6 34.86724094248797 37.0 35.0 37.0 32.0 37.0 7 35.682219198906054 37.0 35.0 37.0 35.0 37.0 8 35.97528641485991 37.0 35.0 37.0 35.0 37.0 9 37.86543707549691 39.0 38.0 39.0 35.0 39.0 10 37.36382929986708 39.0 37.0 39.0 34.0 39.0 11 37.26194074917312 39.0 37.0 39.0 34.0 39.0 12 37.0669027282729 39.0 37.0 39.0 33.0 39.0 13 36.993751973928525 39.0 37.0 39.0 33.0 39.0 14 38.15887478265095 40.0 37.0 41.0 33.0 41.0 15 38.268684209612985 40.0 37.0 41.0 33.0 41.0 16 38.26139412281219 40.0 37.0 41.0 34.0 41.0 17 38.20658311670733 40.0 37.0 41.0 34.0 41.0 18 38.177163338897934 40.0 37.0 41.0 34.0 41.0 19 38.173520898480206 40.0 37.0 41.0 34.0 41.0 20 38.09762139443517 40.0 37.0 41.0 34.0 41.0 21 37.96618031381559 40.0 36.0 41.0 33.0 41.0 22 37.9963376033818 40.0 36.0 41.0 33.0 41.0 23 37.91763728998268 40.0 36.0 41.0 33.0 41.0 24 37.859845001058545 40.0 36.0 41.0 33.0 41.0 25 37.744612693531764 40.0 36.0 41.0 33.0 41.0 26 37.70257799403743 40.0 36.0 41.0 33.0 41.0 27 37.650738726482054 40.0 36.0 41.0 33.0 41.0 28 37.56177138176732 40.0 36.0 41.0 33.0 41.0 29 37.50943060621731 39.0 36.0 41.0 33.0 41.0 30 37.41357229871135 39.0 35.0 41.0 33.0 41.0 31 37.34396593910409 39.0 35.0 41.0 32.0 41.0 32 37.27821633215447 39.0 35.0 41.0 32.0 41.0 33 37.14840992465233 39.0 35.0 41.0 32.0 41.0 34 37.0521889348942 39.0 35.0 41.0 32.0 41.0 35 36.90597505995537 39.0 35.0 41.0 31.0 41.0 36 36.76728727557951 39.0 35.0 41.0 31.0 41.0 37 36.7213637199746 39.0 35.0 41.0 31.0 41.0 38 36.61132956884195 39.0 35.0 41.0 31.0 41.0 39 36.58974737185516 39.0 35.0 41.0 31.0 41.0 40 36.460028598102944 39.0 35.0 41.0 30.0 41.0 41 36.34624962256751 38.0 35.0 40.0 30.0 41.0 42 36.256734783830964 38.0 35.0 40.0 30.0 41.0 43 36.14166906719513 38.0 35.0 40.0 30.0 41.0 44 36.07538411347616 38.0 35.0 40.0 30.0 41.0 45 36.061124106743115 38.0 35.0 40.0 30.0 41.0 46 35.82945864901729 38.0 35.0 40.0 29.0 41.0 47 35.73899025096224 38.0 35.0 40.0 29.0 41.0 48 35.647609941311416 38.0 34.0 40.0 29.0 41.0 49 35.684429131193795 37.0 34.0 40.0 29.0 41.0 50 35.500732305791466 37.0 34.0 40.0 29.0 41.0 51 34.43170120535451 36.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 19.0 10 18.0 11 23.0 12 14.0 13 21.0 14 26.0 15 29.0 16 63.0 17 127.0 18 228.0 19 419.0 20 766.0 21 1199.0 22 1849.0 23 2793.0 24 4040.0 25 5923.0 26 8334.0 27 10446.0 28 12428.0 29 15158.0 30 18692.0 31 24096.0 32 31530.0 33 44608.0 34 76645.0 35 100590.0 36 103814.0 37 150939.0 38 237189.0 39 300385.0 40 107.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.496062554879554 4.3875875903668815 53.55662875567017 17.559721099083404 2 20.00140561064238 4.57994800975945 53.83801118241356 21.580635197184613 3 21.556080393987457 4.516001402139999 51.92828956273362 21.999628641138926 4 18.69679069589874 4.710444207669428 52.154401990761144 24.438363105670685 5 18.050296566492325 7.606522727509361 50.042081553182406 24.301099152815905 6 21.761368960646372 7.730858533097792 53.186658152021124 17.321114354234705 7 85.4370928501272 1.8622605689773055 8.548542156172019 4.152104424723476 8 87.62906455744088 2.4912279483984716 6.193710499737967 3.685996994422676 9 82.53225095529464 4.710444207669428 8.004518777916989 4.752786059118942 10 40.95584994325498 28.66734228527996 14.811578761049663 15.565229010415402 11 31.930961958275923 25.268974876011256 23.023381725673392 19.776681440039425 12 27.699293029906535 22.612023697554235 29.336829428280886 20.35185384425834 13 25.00546626360926 23.680895148387364 30.199457885475706 21.11418070252767 14 21.347755014212286 25.244767137170243 30.318674491811016 23.08880335680645 15 19.934248657728602 23.149713151309648 33.77951348518556 23.136524705776193 16 22.060104605196944 21.945920432025712 32.57832374857269 23.41565121420465 17 22.01559360152153 21.226542787829146 30.228264227035616 26.529599383613707 18 23.650266718957695 21.88197382440626 29.68129080175337 24.786468654882675 19 25.126071127369148 23.247325001475026 27.86276034165015 23.763843529505678 20 28.649208172671457 23.121687704551057 26.38608827234834 21.843015850429147 21 27.001867206236053 24.72260881335226 26.635627544415563 21.639896435996125 22 24.889026172123096 23.908048769483326 26.186092437120617 25.01683262127296 23 24.881043691931794 25.40675942540025 25.603024318799434 24.10917256386852 24 23.858592098732867 23.099475585757865 28.704217873120214 24.337714442389053 25 24.0056606196487 24.678184575765886 26.474849981432058 24.841304823153358 26 23.435867712950014 26.102449927290017 25.934123714560393 24.52755864519958 27 23.667186106319697 25.190538331522816 26.93306169763059 24.209213864526898 28 20.78230041196539 26.220191510111718 29.315311438199988 23.682196639722903 29 22.07086360023739 24.91557659536808 28.565478896751824 24.448080907642705 30 23.85243170641132 25.295525299256237 27.596301682220936 23.255741312111507 31 25.103859008575963 26.539577483852835 25.61074650072363 22.74581700684758 32 25.673738681363684 26.22964901381663 25.619770173983365 22.47684213083632 33 25.069239339050643 25.965706570969456 25.453613113479634 23.51144097650027 34 23.63837976475978 24.73128542225585 27.80115641843467 23.829178394549704 35 23.850609618541565 25.15071269665534 26.78278283142043 24.215894853382665 36 24.954968399790374 27.544675859244578 25.476519360985105 22.02383637997994 37 23.66770670285391 27.36984218983726 26.876403441490154 22.086047665818672 38 22.2589724812672 27.364896522762216 27.36749950543329 23.00863149053729 39 23.867529005903563 25.981758297441093 26.74391162353235 23.406801073122992 40 25.124075507321326 24.644432567130924 28.043580871200945 22.187911054346806 41 22.569248015659543 24.47810197444912 28.14605162235233 24.806598387539 42 23.46337256317439 24.771891951924648 27.32940919234654 24.43532629255443 43 24.102665107190827 23.591959907125577 27.300776382964692 25.004598602718904 44 23.430488215429786 25.16902034144191 27.467193741735528 23.93329770139277 45 23.9761601493765 24.539705897664604 25.68631976427389 25.79781418868501 46 24.013816632018077 25.2930090826742 27.215658849620482 23.47751543568724 47 22.3155439713186 25.333181781897817 29.299953840440633 23.05132040634295 48 22.578445221097347 24.30630511815806 29.056401428516892 24.058848232227703 49 22.788072092208058 24.109866692580805 29.432532424487473 23.669528790723664 50 22.629810745806594 24.815622060798734 28.04054405808469 24.51402313530998 51 21.86106319694861 24.297281444898328 27.062516702472138 26.779138655680924 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 209.0 1 774.0 2 1339.0 3 3271.5 4 5204.0 5 3689.5 6 2175.0 7 2078.0 8 1981.0 9 2053.0 10 2125.0 11 2151.0 12 2177.0 13 2188.5 14 2200.0 15 2339.5 16 2479.0 17 2270.5 18 2062.0 19 2168.5 20 2275.0 21 2650.0 22 3025.0 23 3358.5 24 3692.0 25 4121.5 26 6238.0 27 7925.0 28 9659.0 29 11393.0 30 13071.5 31 14750.0 32 17266.5 33 19783.0 34 23284.5 35 26786.0 36 28738.0 37 30690.0 38 33971.0 39 37252.0 40 45181.0 41 53110.0 42 59505.5 43 65901.0 44 77191.5 45 88482.0 46 97904.0 47 107326.0 48 104947.0 49 102568.0 50 94523.5 51 86479.0 52 79151.5 53 71824.0 54 67871.5 55 63919.0 56 64384.0 57 64849.0 58 61633.5 59 58418.0 60 56870.0 61 55322.0 62 49808.5 63 44295.0 64 38035.0 65 31775.0 66 28033.5 67 24292.0 68 20108.0 69 15924.0 70 14025.5 71 12127.0 72 10350.0 73 8573.0 74 7239.0 75 4787.5 76 3670.0 77 2793.5 78 1917.0 79 1439.0 80 961.0 81 760.0 82 559.0 83 360.0 84 161.0 85 101.5 86 42.0 87 38.5 88 35.0 89 23.5 90 12.0 91 8.0 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1152524.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.663256331262218 #Duplication Level Percentage of deduplicated Percentage of total 1 75.83939706331975 22.496434750976285 2 10.62607561256712 6.304080093819053 3 3.5367999736229483 3.147390126299369 4 1.6293222697628549 1.933240165368381 5 0.9183895654400362 1.3621212545802155 6 0.5824118558090288 1.0365739301537609 7 0.4266814305195705 0.885973245170417 8 0.3269982164616011 0.7759865531812833 9 0.24959852380186434 0.6663514492295419 >10 4.88899460344042 39.69605367379607 >50 0.8995387196104491 16.25842887469371 >100 0.07123323838781524 3.7068108487334968 >500 0.0028493295354024978 0.542029276338587 >1k 0.0017095977212414986 1.1885257576599424 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGCT 2689 0.233314013417508 TruSeq Adapter, Index 21 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2648 0.22975660376703652 No Hit CCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGC 2643 0.22932277332185705 TruSeq Adapter, Index 15 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGC 2461 0.21353134511732508 TruSeq Adapter, Index 15 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGC 2399 0.20815184759709993 TruSeq Adapter, Index 15 (95% over 22bp) TGTTTTGGGACAACCATCCGTAACAAGATCTGACTCCCTCTTCTGGAGTGT 1222 0.1060281608018575 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.470643561435597E-4 0.0 0.0 0.2488451433549323 0.0 2 3.470643561435597E-4 0.0 0.0 0.9751640746743668 0.0 3 3.470643561435597E-4 0.0 0.0 1.4072591980730986 0.0 4 3.470643561435597E-4 0.0 0.0 1.8548854514092548 0.0 5 3.470643561435597E-4 0.0 0.0 2.6040238641451285 0.0 6 3.470643561435597E-4 0.0 0.0 3.1116054850050845 0.0 7 3.470643561435597E-4 0.0 0.0 3.579968833620818 0.0 8 3.470643561435597E-4 0.0 0.0 4.340213305753286 0.0 9 3.470643561435597E-4 0.0 0.0 4.748360988578112 0.0 10 3.470643561435597E-4 0.0 0.0 5.522488034956322 0.0 11 3.470643561435597E-4 0.0 0.0 6.73174701784952 0.0 12 3.470643561435597E-4 0.0 0.0 7.8642180119459555 0.0 13 3.470643561435597E-4 0.0 0.0 8.22004574308214 0.0 14 3.470643561435597E-4 0.0 0.0 8.354619947176804 0.0 15 3.470643561435597E-4 0.0 0.0 8.556958466808501 0.0 16 3.470643561435597E-4 0.0 0.0 9.043629460210807 0.0 17 3.470643561435597E-4 0.0 0.0 9.711468047520052 0.0 18 4.3383044517944963E-4 0.0 0.0 10.467808045645905 0.0 19 4.3383044517944963E-4 0.0 0.0 10.950140734596417 0.0 20 4.3383044517944963E-4 0.0 0.0 11.46639896435996 0.0 21 4.3383044517944963E-4 0.0 0.0 12.183260391974484 0.0 22 4.3383044517944963E-4 0.0 0.0 12.953916794791258 0.0 23 4.3383044517944963E-4 0.0 0.0 13.679194533042262 0.0 24 4.3383044517944963E-4 0.0 0.0 14.257664048644541 0.0 25 4.3383044517944963E-4 0.0 0.0 14.761948558121132 0.0 26 5.205965342153395E-4 0.0 0.0 15.226754497086395 0.0 27 5.205965342153395E-4 0.0 0.0 15.672211598196654 0.0 28 5.205965342153395E-4 0.0 0.0 16.142049970326 0.0 29 5.205965342153395E-4 0.0 0.0 16.649978655542096 0.0 30 5.205965342153395E-4 0.0 0.0 17.234608563465923 0.0 31 5.205965342153395E-4 0.0 0.0 17.750346196695254 0.0 32 5.205965342153395E-4 0.0 0.0 18.240314301480925 0.0 33 5.205965342153395E-4 0.0 0.0 18.74997830847774 0.0 34 5.205965342153395E-4 0.0 0.0 19.261030572899134 0.0 35 5.205965342153395E-4 0.0 0.0 19.82561751425567 0.0 36 5.205965342153395E-4 0.0 0.0 20.350292054655696 0.0 37 5.205965342153395E-4 0.0 0.0 20.87496659505572 0.0 38 5.205965342153395E-4 0.0 0.0 21.360856693656704 0.0 39 5.205965342153395E-4 0.0 0.0 21.869045677139912 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCATT 30 2.1655069E-6 45.000004 12 CGTGCAA 20 7.0332934E-4 45.000004 16 ATTACGA 20 7.0332934E-4 45.000004 13 GCGATAG 35 1.211938E-7 45.000004 9 GACGCAT 35 1.211938E-7 45.000004 11 TCGAATC 25 3.8908132E-5 45.0 34 CGTAACA 300 0.0 42.75 19 CGCAATC 95 0.0 42.63158 18 TCCGTAA 315 0.0 42.142857 17 CTTTACG 60 3.6379788E-12 41.250004 1 CGATAGG 55 6.184564E-11 40.909092 2 AGACACG 665 0.0 40.601505 24 AACACGT 625 0.0 40.32 41 TTTACGG 230 0.0 40.1087 2 TACGGGA 215 0.0 39.76744 4 CCGTAAC 335 0.0 39.626865 18 GTCAAGC 695 0.0 39.496403 16 ACACGAC 685 0.0 39.416058 26 CGAACGT 40 3.4582263E-7 39.375004 18 CAACGAC 115 0.0 39.130436 10 >>END_MODULE