SRR2933134.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933134.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1604937
Sequences flagged as poor quality	0
Sequence length	51
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4808	0.2995756219714543	No Hit
CTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCTGCT	1852	0.11539393758135054	No Hit
GCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCTGC	1789	0.11146854985585104	No Hit
TCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCTGC	1663	0.10361777440485204	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGATCG	30	2.1660417E-6	45.000004	9
ATCGGAA	20	7.034123E-4	45.0	37
ACGACCG	40	3.4593722E-7	39.375	38
TTGGGAC	3000	0.0	39.075	5
TTTGGGA	7685	0.0	38.70527	4
GTCGACA	35	6.2498366E-6	38.57143	13
TACGGGA	335	0.0	38.283585	4
TCGTTTG	710	0.0	38.028168	1
TCAAGCG	1055	0.0	37.962086	17
CGTTTTT	2825	0.0	37.911507	1
CGTTTGG	1190	0.0	37.815125	2
TTTGGGC	4225	0.0	37.54438	4
AATGCGT	30	1.1401235E-4	37.500004	36
AACACGT	985	0.0	37.461926	41
ACATACG	410	0.0	37.317074	17
CGACCAA	1065	0.0	37.1831	29
ACACGAC	1060	0.0	37.146225	26
TGGGCGA	2770	0.0	37.12094	6
GACACGA	1075	0.0	36.83721	25
CACGACC	1070	0.0	36.799065	27