##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933133.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1372997 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.21683222905804 33.0 31.0 34.0 30.0 34.0 2 32.41185596181201 34.0 31.0 34.0 30.0 34.0 3 32.47930112010442 34.0 31.0 34.0 30.0 34.0 4 35.94931452872803 37.0 35.0 37.0 35.0 37.0 5 35.16120574189164 37.0 35.0 37.0 35.0 37.0 6 34.82656844843798 37.0 35.0 37.0 32.0 37.0 7 35.60474786179431 37.0 35.0 37.0 33.0 37.0 8 35.8947128070928 37.0 35.0 37.0 35.0 37.0 9 37.76230392346087 39.0 38.0 39.0 35.0 39.0 10 37.29252503829215 39.0 37.0 39.0 34.0 39.0 11 37.18056121025756 39.0 37.0 39.0 34.0 39.0 12 36.914037685442864 39.0 35.0 39.0 33.0 39.0 13 36.78510368194541 39.0 35.0 39.0 33.0 39.0 14 37.68476988660572 40.0 37.0 41.0 33.0 41.0 15 37.87026992775658 40.0 37.0 41.0 33.0 41.0 16 37.95527229848281 40.0 37.0 41.0 33.0 41.0 17 37.9256699031389 40.0 36.0 41.0 33.0 41.0 18 37.908583922616 40.0 36.0 41.0 33.0 41.0 19 37.909722308206064 40.0 36.0 41.0 33.0 41.0 20 37.786696547771044 40.0 36.0 41.0 33.0 41.0 21 37.650190058681844 40.0 36.0 41.0 33.0 41.0 22 37.733014711612626 40.0 36.0 41.0 33.0 41.0 23 37.69069488134351 39.0 35.0 41.0 33.0 41.0 24 37.607163744713205 39.0 35.0 41.0 33.0 41.0 25 37.480542929081416 39.0 35.0 41.0 33.0 41.0 26 37.441311962080036 39.0 35.0 41.0 33.0 41.0 27 37.38575539494988 39.0 35.0 41.0 33.0 41.0 28 37.27810767248581 39.0 35.0 41.0 32.0 41.0 29 37.18759618557069 39.0 35.0 41.0 32.0 41.0 30 37.083801348437035 39.0 35.0 41.0 32.0 41.0 31 36.95585350878407 39.0 35.0 41.0 31.0 41.0 32 36.91884614460192 39.0 35.0 41.0 31.0 41.0 33 36.80708916334122 39.0 35.0 41.0 31.0 41.0 34 36.6268870216031 39.0 35.0 41.0 31.0 41.0 35 36.49547231348648 39.0 35.0 41.0 30.0 41.0 36 36.358879152685695 39.0 35.0 41.0 30.0 41.0 37 36.28374060540555 39.0 35.0 40.0 30.0 41.0 38 36.13744385457507 38.0 35.0 40.0 30.0 41.0 39 36.12256326852863 38.0 35.0 40.0 30.0 41.0 40 35.99902985949714 38.0 35.0 40.0 30.0 41.0 41 35.82409429882221 38.0 35.0 40.0 29.0 41.0 42 35.75969503210859 38.0 35.0 40.0 29.0 41.0 43 35.62336479977742 38.0 35.0 40.0 29.0 41.0 44 35.543862805235555 38.0 34.0 40.0 29.0 41.0 45 35.50800766498397 37.0 34.0 40.0 29.0 41.0 46 35.32820537845312 37.0 34.0 40.0 28.0 41.0 47 35.204924701219305 37.0 34.0 40.0 28.0 41.0 48 35.11841686471274 37.0 34.0 40.0 28.0 41.0 49 35.16660269468906 37.0 34.0 40.0 28.0 41.0 50 34.971083695011714 36.0 34.0 40.0 27.0 41.0 51 33.906452818178046 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 41.0 10 41.0 11 33.0 12 28.0 13 26.0 14 44.0 15 60.0 16 123.0 17 224.0 18 412.0 19 765.0 20 1244.0 21 2058.0 22 2998.0 23 4389.0 24 6234.0 25 9161.0 26 12546.0 27 15098.0 28 17815.0 29 20983.0 30 26040.0 31 33215.0 32 43154.0 33 62118.0 34 102549.0 35 113007.0 36 124577.0 37 180929.0 38 277884.0 39 315081.0 40 115.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.323289125904864 4.803797823301871 52.8219653793854 17.050947671407876 2 21.225173835048437 4.348225087163337 51.153134347707976 23.273466730080255 3 21.711992087382566 4.815232662562263 51.043447290853514 22.429327959201657 4 18.984600840351433 5.008168262567216 49.999453749716864 26.007777147364486 5 18.024657009447218 8.263091616369154 48.865073995063355 24.847177379120275 6 22.729547114815254 7.834248727418924 51.363258623289056 18.07294553447677 7 83.52960712951302 2.3499687180671187 9.407449542861347 4.712974609558506 8 86.15932882591878 2.6261528612225664 7.294116447450359 3.9204018654083 9 80.8150345557929 4.8171991635815665 9.394558036179248 4.9732082444462735 10 42.71779180872209 25.44186185403173 16.12691069244871 15.713435644797476 11 33.082810814590275 23.168805175830684 23.35394760512951 20.394436404449536 12 27.72191053585696 21.060861749880008 30.30669404230308 20.910533671959953 13 26.254245275117132 22.103835623821467 31.81915182626036 19.822767274801038 14 21.974483556773976 23.365600944503157 33.97902544579486 20.68089005292801 15 20.766323597211063 20.50324946085097 35.97932114928146 22.751105792656503 16 25.910690263707785 20.154377613352395 31.2017433395703 22.73318878336952 17 25.200710562368307 20.89312649627057 28.94267066861763 24.963492272743494 18 26.999039327835384 19.68780703817998 29.905673501107433 23.4074801328772 19 26.76881304183476 22.56698303055287 26.90464727890884 23.75955664870353 20 27.95978432582154 24.674198122792692 26.475076056247755 20.89094149513801 21 27.263570131617186 23.639745753268215 28.18083360706542 20.91585050804918 22 25.469465701673055 20.98059937494401 28.94915283864422 24.600782084738714 23 24.224889056567495 23.354603105469277 28.329413684079423 24.0910941538838 24 24.222558388692764 24.090365820172952 28.577993979593547 23.109081811540737 25 25.829626721689852 24.046592964150687 25.563930583970684 24.559849730188777 26 24.111851664643112 23.397064960812006 25.84004189375505 26.651041480789832 27 23.399177128573477 21.663339395497587 29.146968274511885 25.790515201417048 28 21.716434923018767 23.563052213515398 28.154395093361455 26.566117770104373 29 22.99458775219465 23.50245484877243 27.189789926707782 26.313167472325137 30 26.198090746010372 21.288538867892644 29.039247718676737 23.47412266742025 31 26.033487327357598 23.186285184891155 27.39292219866467 23.387305289086573 32 25.710762660078647 22.74739129073115 26.68374366440713 24.85810238478307 33 25.577550424363636 22.306530895551848 25.717754663702834 26.39816401638168 34 21.809880138121205 23.2682955607332 29.82286195818345 25.09896234296215 35 22.34724474998853 25.291315275998414 27.695472022153 24.665967951860054 36 24.992407121064357 25.551913077741613 25.406319168942105 24.04936063225193 37 23.332461760659346 25.242444084000184 27.5181227635603 23.90697139178017 38 23.147246497989435 25.44259018774258 27.789427070853034 23.620736243414953 39 23.05751578481235 22.6520524079805 26.617392463348427 27.673039343858726 40 25.27966193662477 22.523137341159522 27.79925957594955 24.39794114626616 41 21.76814661648933 23.3827167867082 26.77493104500592 28.074205551796545 42 22.725031445807968 23.411631635029064 27.33276183414822 26.530575085014753 43 23.23420954306528 21.81366747341764 28.727957890658175 26.224165092858907 44 24.14870535041227 21.86792833487619 28.343397691327805 25.639968623383737 45 23.22554237190613 21.952924878932727 26.71061917833761 28.110913570823538 46 23.289417238347934 21.89589634937294 28.283747160408947 26.53093925187018 47 20.80587211771038 24.437926666991988 30.52818032377347 24.228020891524164 48 21.756784610600022 24.607919755105073 28.514847446862596 25.12044818743231 49 23.56669388206966 22.722409444448896 28.97114851671198 24.739748156769462 50 22.1601358196704 23.24957738436428 27.956215490638364 26.634071305326962 51 21.636682381680366 22.899613036299424 26.87755326486511 28.5861513171551 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 191.0 1 826.5 2 1462.0 3 4726.0 4 7990.0 5 5380.0 6 2770.0 7 2708.5 8 2647.0 9 2724.5 10 2802.0 11 2844.5 12 2887.0 13 2906.5 14 2926.0 15 2711.5 16 2497.0 17 2537.0 18 2577.0 19 2854.5 20 3132.0 21 3097.0 22 3062.0 23 3871.0 24 4680.0 25 5291.5 26 7457.0 27 9011.0 28 9664.5 29 10318.0 30 12709.0 31 15100.0 32 18362.0 33 21624.0 34 25678.0 35 29732.0 36 31896.0 37 34060.0 38 37135.0 39 40210.0 40 44275.0 41 48340.0 42 52949.0 43 57558.0 44 64038.0 45 70518.0 46 82123.5 47 93729.0 48 107323.5 49 120918.0 50 122869.0 51 124820.0 52 116418.5 53 108017.0 54 104054.0 55 100091.0 56 94664.5 57 89238.0 58 83669.5 59 78101.0 60 73392.5 61 68684.0 62 62504.0 63 56324.0 64 51179.5 65 46035.0 66 39971.5 67 33908.0 68 28607.0 69 23306.0 70 19909.5 71 16513.0 72 14460.0 73 12407.0 74 10280.0 75 6797.0 76 5441.0 77 4205.0 78 2969.0 79 2101.0 80 1233.0 81 940.5 82 648.0 83 458.0 84 268.0 85 180.5 86 93.0 87 66.0 88 39.0 89 44.0 90 49.0 91 32.0 92 15.0 93 8.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1372997.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.601997786470108 #Duplication Level Percentage of deduplicated Percentage of total 1 77.23470367694182 23.635362309604485 2 9.073908389184272 5.553594488808993 3 2.9961923048388286 2.750684108415498 4 1.4765908468004816 1.8074651930124142 5 0.8778187139769608 1.3431503171022496 6 0.6357300312102578 1.1672765404733327 7 0.4700426090462245 1.0068970017105439 8 0.3739332835532004 0.9154484412466031 9 0.30749399278398504 0.8468937437875529 >10 6.066846879972725 47.5882489958799 >50 0.4160646475967598 7.713853629409955 >100 0.06500174461798132 3.572211424320204 >500 0.0035455496728684964 0.7626166819128312 >1k 0.0021273298037210978 1.336297124315436 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4615 0.33612600755864724 No Hit GCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTGC 2202 0.16037908312982477 TruSeq Adapter, Index 23 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTGC 2103 0.15316857939238032 TruSeq Adapter, Index 23 (95% over 23bp) CTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTGCT 2082 0.15163907859958908 TruSeq Adapter, Index 22 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTGC 2066 0.15047374466222432 TruSeq Adapter, Index 23 (95% over 23bp) TTTCTGGGGTCTGATGAGCGTCGGCATCGGGCGCCTTAACCCGGCGTTCGG 1506 0.1096870568544578 No Hit GCGCGCGGGAGAAACAAGCGAGATAGGAATGTCTTACACGCGGGGCAAGAC 1448 0.10546272133151056 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.641668554264867E-4 0.0 0.0 0.1613259169539336 0.0 2 3.641668554264867E-4 0.0 0.0 0.67603935041373 0.0 3 3.641668554264867E-4 0.0 0.0 1.0217793629556364 0.0 4 3.641668554264867E-4 0.0 0.0 1.4306659082284958 0.0 5 3.641668554264867E-4 0.0 0.0 2.1509879482620864 0.0 6 3.641668554264867E-4 0.0 0.0 2.769853102373858 0.0 7 3.641668554264867E-4 0.0 0.0 3.320182054294365 0.0 8 3.641668554264867E-4 0.0 0.0 4.181655167491262 0.0 9 3.641668554264867E-4 0.0 0.0 4.718728445874245 0.0 10 3.641668554264867E-4 0.0 0.0 5.519531360957089 0.0 11 3.641668554264867E-4 0.0 0.0 6.73249832301163 0.0 12 3.641668554264867E-4 0.0 0.0 7.700162491250891 0.0 13 3.641668554264867E-4 0.0 0.0 8.070738683332884 0.0 14 3.641668554264867E-4 0.0 0.0 8.223178929014411 0.0 15 3.641668554264867E-4 0.0 0.0 8.441606208899218 0.0 16 4.370002265117841E-4 0.0 0.0 8.846851085617812 0.0 17 4.370002265117841E-4 0.0 0.0 9.422307550562747 0.0 18 4.370002265117841E-4 0.0 0.0 10.042046705127541 0.0 19 4.370002265117841E-4 0.0 0.0 10.441901912385825 0.0 20 4.370002265117841E-4 0.0 0.0 10.896163647844824 0.0 21 4.370002265117841E-4 0.0 0.0 11.484438786100771 0.0 22 4.370002265117841E-4 0.0 0.0 12.130616454369529 0.0 23 4.370002265117841E-4 0.0 0.0 12.73090909885455 0.0 24 5.098335975970814E-4 0.0 0.0 13.2285066901093 0.0 25 5.826669686823788E-4 0.0 0.0 13.678179923189926 0.0 26 5.826669686823788E-4 0.0 0.0 14.069586459402315 0.0 27 5.826669686823788E-4 0.0 0.0 14.515618023928676 0.0 28 5.826669686823788E-4 0.0 0.0 14.943805412539138 0.0 29 5.826669686823788E-4 0.0 0.0 15.454950010815756 0.0 30 5.826669686823788E-4 0.0 0.0 16.092460507925363 0.0 31 5.826669686823788E-4 0.0 0.0 16.522104563957534 0.0 32 5.826669686823788E-4 0.0 0.0 16.98459647034917 0.0 33 5.826669686823788E-4 0.0 0.0 17.439586539519023 0.0 34 5.826669686823788E-4 0.0 0.0 17.947453636096803 0.0 35 6.555003397676761E-4 0.0 0.0 18.5290281042129 0.0 36 6.555003397676761E-4 0.0 0.0 18.984746507093607 0.0 37 6.555003397676761E-4 0.0 0.0 19.45131708226602 0.0 38 6.555003397676761E-4 0.0 0.0 20.01293520670475 0.0 39 6.555003397676761E-4 0.0 0.0 21.029106400086818 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACGAA 20 7.033766E-4 45.0 9 TTACGGG 400 0.0 40.5 3 AGACACG 1245 0.0 40.301205 24 CACGACC 1240 0.0 40.100807 27 CGATTAC 45 1.9288564E-8 40.0 10 AACACGT 1210 0.0 39.97934 41 ACGACCA 1240 0.0 39.919353 28 TCAAGCG 1325 0.0 39.73585 17 ACACGAC 1255 0.0 39.621513 26 ACACGTG 1230 0.0 39.512196 42 AAACACG 1230 0.0 39.512196 40 GCGAGAC 1330 0.0 39.248123 21 CGGGATA 155 0.0 39.193546 6 CGACCAA 1270 0.0 39.15354 29 TCTTGCG 500 0.0 39.15 1 CGAGACA 1320 0.0 39.034092 22 CGTTTTT 2610 0.0 38.96552 1 TACGGGA 295 0.0 38.898304 4 GTCAAGC 1360 0.0 38.878677 16 TATGGGA 870 0.0 38.793106 4 >>END_MODULE