##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933132.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1952577 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.249310526550296 33.0 31.0 34.0 30.0 34.0 2 32.44063614392672 34.0 31.0 34.0 31.0 34.0 3 32.49610079397637 34.0 31.0 34.0 30.0 34.0 4 35.990246223324355 37.0 35.0 37.0 35.0 37.0 5 35.26799916213292 37.0 35.0 37.0 35.0 37.0 6 34.95835401113503 37.0 35.0 37.0 33.0 37.0 7 35.76879119235759 37.0 35.0 37.0 35.0 37.0 8 36.053190219899136 37.0 35.0 37.0 35.0 37.0 9 37.933210828561435 39.0 38.0 39.0 35.0 39.0 10 37.2269590392594 39.0 37.0 39.0 34.0 39.0 11 37.14065924160737 39.0 37.0 39.0 34.0 39.0 12 37.118275489263674 39.0 37.0 39.0 34.0 39.0 13 37.166421605908496 39.0 37.0 39.0 33.0 39.0 14 38.36986505525774 40.0 38.0 41.0 34.0 41.0 15 38.433410308530725 40.0 38.0 41.0 34.0 41.0 16 38.428678612930504 40.0 38.0 41.0 34.0 41.0 17 38.37498393149156 40.0 38.0 41.0 34.0 41.0 18 38.31387187291462 40.0 38.0 41.0 34.0 41.0 19 38.31569664090072 40.0 37.0 41.0 34.0 41.0 20 38.22969439873562 40.0 37.0 41.0 34.0 41.0 21 38.13016388086103 40.0 37.0 41.0 34.0 41.0 22 38.174640487929544 40.0 37.0 41.0 34.0 41.0 23 38.087159686916316 40.0 37.0 41.0 34.0 41.0 24 38.053067305412284 40.0 37.0 41.0 34.0 41.0 25 37.96591069135814 40.0 37.0 41.0 33.0 41.0 26 37.96010144542315 40.0 37.0 41.0 34.0 41.0 27 37.93186798779254 40.0 37.0 41.0 33.0 41.0 28 37.86462812990217 40.0 37.0 41.0 33.0 41.0 29 37.80479028483896 40.0 37.0 41.0 33.0 41.0 30 37.7357031246399 40.0 36.0 41.0 33.0 41.0 31 37.66195289609578 40.0 36.0 41.0 33.0 41.0 32 37.61527560756887 40.0 36.0 41.0 33.0 41.0 33 37.501169480128056 40.0 36.0 41.0 33.0 41.0 34 37.39663634263847 40.0 36.0 41.0 32.0 41.0 35 37.26716231933491 40.0 36.0 41.0 32.0 41.0 36 37.1636729306962 40.0 36.0 41.0 32.0 41.0 37 37.12972087656466 40.0 36.0 41.0 31.0 41.0 38 37.03629408724982 39.0 36.0 41.0 31.0 41.0 39 36.986553667281754 39.0 36.0 41.0 31.0 41.0 40 36.982826797611565 39.0 36.0 41.0 31.0 41.0 41 36.92737187829212 39.0 36.0 41.0 31.0 41.0 42 36.86812351062212 39.0 35.0 41.0 31.0 41.0 43 36.73913704811641 39.0 35.0 41.0 31.0 41.0 44 36.66513996631119 39.0 35.0 41.0 31.0 41.0 45 36.67761681101437 39.0 35.0 41.0 31.0 41.0 46 36.491539642226655 39.0 35.0 41.0 30.0 41.0 47 36.4340894110706 39.0 35.0 41.0 30.0 41.0 48 36.339990177083926 39.0 35.0 40.0 30.0 41.0 49 36.391259858125956 39.0 35.0 40.0 30.0 41.0 50 36.211773978695845 39.0 35.0 40.0 30.0 41.0 51 35.166661801301565 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 7.0 10 5.0 11 9.0 12 11.0 13 10.0 14 14.0 15 17.0 16 52.0 17 132.0 18 243.0 19 505.0 20 996.0 21 1767.0 22 2725.0 23 4447.0 24 7129.0 25 11374.0 26 15667.0 27 17145.0 28 18858.0 29 21520.0 30 26936.0 31 35172.0 32 46872.0 33 65558.0 34 104100.0 35 136112.0 36 158101.0 37 244666.0 38 437021.0 39 595194.0 40 206.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.427335772161612 4.18134598533118 57.04717406791128 16.344144174595932 2 20.21974037387514 3.7987746449947943 54.7395570059465 21.241927975183565 3 18.90860129971827 3.9852461644278305 55.73352548964778 21.372627046206116 4 17.1586062931193 4.226209773033278 54.80797940362915 23.80720453021827 5 15.882190561498982 7.438118957664666 54.18342016729686 22.49627031353949 6 19.46125556124035 7.183685969874684 56.83729758160626 16.51776088727871 7 85.58894220304755 1.3467330609753163 9.464210630361825 3.600114105615297 8 89.16810963152798 1.456229383015369 6.337368513508046 3.0382924719486093 9 83.63992815648244 4.189489070085328 8.334626496163787 3.835956277268451 10 36.654790054374295 24.41010008824236 21.488166663849874 17.446943193533468 11 26.920116338561805 28.551140364758982 24.36538994364883 20.16335335303038 12 20.075264637450918 25.201618169219447 33.150651677244994 21.57246551608464 13 21.205412129713707 25.66049892014502 34.69128234123418 18.4428066089071 14 21.159114339664967 27.19544478911715 33.10701703441145 18.538423836806437 15 19.442613530734 26.814614737344545 34.71192173215192 19.030849999769536 16 19.975396616881177 24.93981031221816 33.60236241643735 21.482430654463304 17 20.823455361811597 25.009461854769366 31.892929190500553 22.274153592918484 18 21.53712760111381 24.515089545764393 32.74682637355659 21.20095647956521 19 22.872132571468374 26.76590987192823 30.278344976920245 20.08361257968316 20 23.90656040709278 26.309794696956896 30.973682471933245 18.809962424017083 21 23.365685450560978 27.065155433050787 30.377700853794753 19.191458262593486 22 22.30011927826662 25.494974077846866 30.084549802645427 22.120356841241087 23 20.467822779844276 27.217313324903447 29.202894431307957 23.111969463944316 24 20.15495419642862 26.35588762952754 31.302632367379108 22.18652580666473 25 19.643681145481075 27.886941206415933 30.37693263825191 22.092445009851083 26 19.78037229773781 28.042171960439973 30.99273421739578 21.184721524426436 27 20.53486238954981 26.95002553036321 31.25546393304848 21.259648147038504 28 19.647368580086727 26.59244680235402 32.32901954698841 21.43116507057084 29 20.013244035958632 25.21508754840398 32.24886905868501 22.522799356952376 30 22.322909672704327 25.64923175884997 31.136032023320976 20.891826545124726 31 21.8567564813065 27.34104724167088 29.586182772817665 21.216013504204955 32 21.013307029633147 26.680945232889663 30.33411742533073 21.971630312146463 33 22.24547354598564 26.364286786129306 29.220870675010513 22.169368992874546 34 21.12403249654175 25.9653780619151 30.35634446170369 22.554244979839464 35 20.646868215696486 25.633560161775947 30.775124361292793 22.944447261234767 36 23.07478783167066 25.975518507080643 29.590638422966165 21.359055238282536 37 22.53821488217878 27.01537506587448 29.855621570877872 20.590788481068863 38 21.20669248895178 26.84744314820875 30.186107897409425 21.759756465430044 39 22.251311984111254 25.421737529429056 30.781065228157455 21.545885258302235 40 22.975892884121855 25.157522597060193 29.24504385742534 22.62154066139261 41 20.51135499393878 25.4075511490712 29.68927729866735 24.391816558322667 42 21.21212121212121 25.437818841459258 30.107903555147892 23.24215639127164 43 21.50470890520579 24.82637048372484 31.438145589136816 22.23077502193255 44 21.406735816308398 25.216316693272532 29.764255135648938 23.612692354770132 45 22.37340704105395 24.860376825088075 29.07531943682631 23.690896697031665 46 23.23488395079938 25.07901096858152 29.25631101872039 22.42979406189871 47 21.483813442440425 25.21216832934117 31.102486611283446 22.201531616934954 48 21.74398243961698 24.222245780832203 31.430207361860763 22.60356441769006 49 22.890006386431878 23.447065083732934 31.443420669197682 22.219507860637506 50 22.72750319193558 23.071458897651667 30.240139057256126 23.960898853156625 51 21.664088023161188 23.11437653931189 29.172677953289423 26.048857484237498 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 142.0 1 609.0 2 1076.0 3 5043.5 4 9011.0 5 6525.5 6 4040.0 7 4135.0 8 4230.0 9 4398.5 10 4567.0 11 4627.5 12 4688.0 13 4774.0 14 4860.0 15 4919.5 16 4979.0 17 5252.0 18 5525.0 19 5645.0 20 5765.0 21 6671.0 22 7577.0 23 8657.0 24 9737.0 25 11764.5 26 17386.5 27 20981.0 28 24932.5 29 28884.0 30 34794.5 31 40705.0 32 45509.5 33 50314.0 34 59116.5 35 67919.0 36 75140.5 37 82362.0 38 90873.0 39 99384.0 40 108479.0 41 117574.0 42 124576.0 43 131578.0 44 140786.0 45 149994.0 46 156779.0 47 163564.0 48 174507.5 49 185451.0 50 194950.5 51 204450.0 52 191103.0 53 177756.0 54 149259.5 55 120763.0 56 100311.0 57 79859.0 58 66443.5 59 53028.0 60 45006.0 61 36984.0 62 30243.0 63 23502.0 64 19290.0 65 15078.0 66 11644.5 67 8211.0 68 6804.5 69 5398.0 70 4309.0 71 3220.0 72 2563.5 73 1907.0 74 1754.0 75 1328.0 76 1055.0 77 792.5 78 530.0 79 402.5 80 275.0 81 226.0 82 177.0 83 111.5 84 46.0 85 38.0 86 30.0 87 16.5 88 3.0 89 2.5 90 2.0 91 2.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1952577.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.858398041044985 #Duplication Level Percentage of deduplicated Percentage of total 1 70.9764410443978 21.192428282403924 2 12.197544623480452 7.283982849825751 3 4.5657423577874345 4.089772580150293 4 2.3137848492967303 2.7634363604656422 5 1.3285271969864836 1.9833846927988108 6 0.8311352023735751 1.4889819419036812 7 0.6206171004770276 1.297144269198561 8 0.4657648003271769 1.112559264134135 9 0.36334731583106444 0.9764071904906289 >10 5.747591049596298 43.149598178660774 >50 0.5210539607715061 9.47677786605187 >100 0.0645991055953155 3.3376907461595953 >500 0.002275823183158877 0.45575175090540426 >1k 0.0014005065742516169 1.1296308164716928 >5k 1.750633217814521E-4 0.2624532103791759 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC 5021 0.25714734937469813 No Hit CTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGCT 4802 0.24593140244917355 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4622 0.23671281593504379 No Hit TCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC 3407 0.17448735696466772 No Hit GCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC 3367 0.17243878218375 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.5607184761471634E-4 0.0 0.0 0.26401007489077255 0.0 2 2.5607184761471634E-4 0.0 0.0 0.9342525288375311 0.0 3 2.5607184761471634E-4 0.0 0.0 1.361380370658878 0.0 4 2.5607184761471634E-4 0.0 0.0 1.835318146224195 0.0 5 2.5607184761471634E-4 0.0 0.0 2.612035274409153 0.0 6 2.5607184761471634E-4 0.0 0.0 3.2638917696971745 0.0 7 2.5607184761471634E-4 0.0 0.0 3.78878784293782 0.0 8 2.5607184761471634E-4 0.0 0.0 4.6471918905118725 0.0 9 2.5607184761471634E-4 0.0 0.0 5.098953844073755 0.0 10 2.5607184761471634E-4 0.0 0.0 5.983016290778801 0.0 11 2.5607184761471634E-4 0.0 0.0 7.5813655492203385 0.0 12 2.5607184761471634E-4 0.0 0.0 9.014702109058952 0.0 13 2.5607184761471634E-4 0.0 0.0 9.512249708974345 0.0 14 3.072862171376596E-4 0.0 0.0 9.66911932282312 0.0 15 3.072862171376596E-4 0.0 0.0 9.882171100038564 0.0 16 3.072862171376596E-4 0.0 0.0 10.440561370947215 0.0 17 3.072862171376596E-4 0.0 0.0 11.322114313545637 0.0 18 3.072862171376596E-4 0.0 0.0 12.327964530976244 0.0 19 3.072862171376596E-4 0.0 0.0 13.014083439475113 0.0 20 4.097149561835462E-4 0.0 0.0 13.727089891973531 0.0 21 4.097149561835462E-4 0.0 0.0 14.727562600604227 0.0 22 4.097149561835462E-4 0.0 0.0 15.79932571161086 0.0 23 4.097149561835462E-4 0.0 0.0 16.90755345371783 0.0 24 4.097149561835462E-4 0.0 0.0 17.73456309277432 0.0 25 4.097149561835462E-4 0.0 0.0 18.440092247322386 0.0 26 4.097149561835462E-4 0.0 0.0 19.056201112683393 0.0 27 4.097149561835462E-4 0.0 0.0 19.67353912291295 0.0 28 4.097149561835462E-4 0.0 0.0 20.338660139907415 0.0 29 4.097149561835462E-4 0.0 0.0 21.025598478318653 0.0 30 4.097149561835462E-4 0.0 0.0 21.803954466328346 0.0 31 4.097149561835462E-4 0.0 0.0 22.54564096575961 0.0 32 4.097149561835462E-4 0.0 0.0 23.242258820010683 0.0 33 4.609293257064894E-4 0.0 0.0 23.93073358950761 0.0 34 4.609293257064894E-4 0.0 0.0 24.603024618235285 0.0 35 4.609293257064894E-4 0.0 0.0 25.31198513554139 0.0 36 4.609293257064894E-4 0.0 0.0 25.99846254462692 0.0 37 4.609293257064894E-4 0.0 0.0 26.69236603729328 0.0 38 4.609293257064894E-4 0.0 0.0 27.370751575994188 0.0 39 4.609293257064894E-4 0.0 0.0 28.04212074607045 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGAATC 20 7.034498E-4 45.000004 13 GACGTCG 95 0.0 42.63158 35 GCGCGAC 65 0.0 41.53846 9 CGTTTTT 4505 0.0 41.25416 1 AAACTCG 50 1.0822987E-9 40.5 10 ACGTCGG 100 0.0 40.5 36 TAGGGCG 270 0.0 40.0 5 GCTACGA 85 0.0 39.705883 10 ACAATCG 40 3.4598816E-7 39.375004 23 CGTAGAC 35 6.2505333E-6 38.571426 35 TACCTCG 35 6.2505333E-6 38.571426 1 TCGTGCG 170 0.0 38.38235 1 CCGAATC 135 0.0 38.333332 17 GCGGAAC 65 9.094947E-12 38.07692 5 TTCCGCG 190 0.0 37.894737 1 CGTATGG 125 0.0 37.8 2 TCAAGCG 365 0.0 37.602737 17 GTATGCG 30 1.1402143E-4 37.499996 1 GTCCGCG 30 1.1402143E-4 37.499996 1 TCGCGCA 30 1.1402143E-4 37.499996 35 >>END_MODULE