SRR2933131.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933131.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	483846
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGC	1981	0.40942779314079275	No Hit
CTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGCT	1919	0.3966137986053414	No Hit
CCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGC	1716	0.354658300368299	No Hit
GCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGC	1634	0.33771075920850846	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1176	0.24305254151114197	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGC	851	0.1758824088656308	No Hit
GAATCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTC	716	0.14798096915134154	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCG	689	0.14240068120848368	No Hit
TCCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTG	654	0.13516697461589017	No Hit
TTTTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA	568	0.11739272413123183	No Hit
TGTCTTGGGAAGCAGAAGCAAGCAGATCTCTTGAGTTCAATGCCAGTCTGG	557	0.11511927348784531	No Hit
TGCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTG	505	0.10437205226456353	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGCATA	20	7.029231E-4	45.000004	40
TACTTGC	20	7.029231E-4	45.000004	13
TAGACCC	20	7.029231E-4	45.000004	14
CGGTTAT	20	7.029231E-4	45.000004	10
CCGGATG	20	7.029231E-4	45.000004	10
CCTCGTG	20	7.029231E-4	45.000004	23
TCTACGG	40	6.8012014E-9	45.000004	2
CTACGAA	20	7.029231E-4	45.000004	11
GGTATGA	20	7.029231E-4	45.000004	8
GCCTATT	20	7.029231E-4	45.000004	16
CATACCG	20	7.029231E-4	45.000004	44
AGTTACA	20	7.029231E-4	45.000004	45
CGACTTA	20	7.029231E-4	45.000004	44
GTTGCGT	20	7.029231E-4	45.000004	27
AACACGA	20	7.029231E-4	45.000004	40
CGGGTCA	25	3.8874452E-5	45.0	6
CGTGATA	25	3.8874452E-5	45.0	25
TTCGTCG	50	2.1827873E-11	45.0	1
ATCGTGA	25	3.8874452E-5	45.0	30
GACTTAC	25	3.8874452E-5	45.0	9