##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933130.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1244561 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.112237969854434 33.0 31.0 34.0 30.0 34.0 2 32.295368407012596 34.0 31.0 34.0 30.0 34.0 3 32.36060908223864 34.0 31.0 34.0 30.0 34.0 4 35.87352327447188 37.0 35.0 37.0 35.0 37.0 5 35.12189519035226 37.0 35.0 37.0 35.0 37.0 6 34.805503305985 37.0 35.0 37.0 32.0 37.0 7 35.618022740548675 37.0 35.0 37.0 33.0 37.0 8 35.8947034335802 37.0 35.0 37.0 35.0 37.0 9 37.759680722760876 39.0 38.0 39.0 35.0 39.0 10 37.18556342356863 39.0 37.0 39.0 34.0 39.0 11 37.08165529853498 39.0 37.0 39.0 33.0 39.0 12 36.92740090682578 39.0 37.0 39.0 33.0 39.0 13 36.89729470873665 39.0 37.0 39.0 33.0 39.0 14 38.021775549772165 40.0 37.0 41.0 33.0 41.0 15 38.10177966367257 40.0 37.0 41.0 33.0 41.0 16 38.100371938378274 40.0 37.0 41.0 33.0 41.0 17 38.06445083848843 40.0 37.0 41.0 33.0 41.0 18 38.00975122955002 40.0 37.0 41.0 33.0 41.0 19 38.006653751804855 40.0 37.0 41.0 34.0 41.0 20 37.93386021255688 40.0 36.0 41.0 33.0 41.0 21 37.7989797205601 40.0 36.0 41.0 33.0 41.0 22 37.84850160016263 40.0 36.0 41.0 33.0 41.0 23 37.77567672456392 39.0 36.0 41.0 33.0 41.0 24 37.71758314779267 39.0 36.0 41.0 33.0 41.0 25 37.60162900814022 39.0 36.0 41.0 33.0 41.0 26 37.58050107628312 39.0 36.0 41.0 33.0 41.0 27 37.51447217131181 39.0 36.0 41.0 33.0 41.0 28 37.45110524916014 39.0 36.0 41.0 33.0 41.0 29 37.41094490346395 39.0 36.0 41.0 33.0 41.0 30 37.31147288079893 39.0 35.0 41.0 32.0 41.0 31 37.22154076819055 39.0 35.0 41.0 32.0 41.0 32 37.15492691800563 39.0 35.0 41.0 32.0 41.0 33 37.02417719983191 39.0 35.0 41.0 31.0 41.0 34 36.92286597442793 39.0 35.0 41.0 31.0 41.0 35 36.76624608998675 39.0 35.0 41.0 31.0 41.0 36 36.61212989961923 39.0 35.0 41.0 31.0 41.0 37 36.58696841697594 39.0 35.0 40.0 31.0 41.0 38 36.503158945202365 39.0 35.0 40.0 31.0 41.0 39 36.47744787117706 39.0 35.0 40.0 30.0 41.0 40 36.39195266443348 39.0 35.0 40.0 30.0 41.0 41 36.185394689372394 38.0 35.0 40.0 30.0 41.0 42 36.0558735168465 38.0 35.0 40.0 30.0 41.0 43 35.93844014074039 38.0 35.0 40.0 29.0 41.0 44 35.87643353760885 38.0 35.0 40.0 29.0 41.0 45 35.85632042141767 38.0 35.0 40.0 29.0 41.0 46 35.55899228724024 38.0 34.0 40.0 28.0 41.0 47 35.381916193742214 37.0 34.0 40.0 28.0 41.0 48 35.20092627038771 37.0 34.0 40.0 28.0 41.0 49 35.19964148000781 37.0 34.0 40.0 28.0 41.0 50 34.92789827095659 36.0 34.0 40.0 27.0 41.0 51 33.74197327411031 35.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 11.0 10 26.0 11 19.0 12 11.0 13 20.0 14 20.0 15 36.0 16 61.0 17 100.0 18 228.0 19 440.0 20 830.0 21 1342.0 22 2205.0 23 3108.0 24 4678.0 25 7197.0 26 9712.0 27 12163.0 28 14551.0 29 17930.0 30 22209.0 31 28585.0 32 37032.0 33 51664.0 34 84286.0 35 111064.0 36 118653.0 37 174861.0 38 265025.0 39 276396.0 40 95.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.224735468972593 4.6659826235917725 56.56235411522618 15.54692779220946 2 20.85329686532038 4.622834879126053 52.598305747970564 21.925562507582995 3 19.946953182688514 4.82443206881784 52.62353552778851 22.605079220705132 4 18.90321165455128 4.733235253233871 51.60164909554453 24.761903996670313 5 16.9603579093351 7.863495642238508 50.87424401053866 24.301902437887737 6 21.400799157293214 7.566362757631004 53.7949525977433 17.23788548733248 7 83.29796611013843 1.9120798418076734 10.065235854249007 4.724718193804884 8 85.66578898101419 2.28875884749723 7.292611611644588 4.752840559843993 9 79.85297627034753 4.971070120307481 9.533803485727095 5.642150123617886 10 39.94942795089996 24.679465289367094 18.411471996953143 16.959634762779807 11 29.54889314384751 25.66173936030456 24.31242823774809 20.476939258099843 12 24.109304405328466 22.75477055765045 31.89622686232334 21.239698174697743 13 23.047805611777967 24.553798487980902 32.53926484921189 19.859131051029237 14 21.155572125432183 25.668569077771195 31.96275634541015 21.213102451386472 15 19.108424577019527 24.548575762859354 35.1308614041417 21.21213825597942 16 20.591116064218628 22.933146707955657 32.443889853530685 24.031847374295033 17 21.132270736428346 22.573100073037804 29.936499697483693 26.358129493050157 18 22.231051752384978 22.357602399560967 32.17777192118345 23.233573926870598 19 23.86528261772625 24.82128236382146 29.290488774756724 22.022946243695568 20 25.608387214447504 24.680027736687876 28.31175008697846 21.399834961886157 21 24.98149950062713 25.424466940551728 28.71156978243734 20.8824637763838 22 23.47855990987987 23.85893499796314 27.276204219801198 25.386300872355793 23 21.91270656882226 24.731531841348072 26.932629256420537 26.42313233340913 24 22.676751079296235 24.309937399613197 28.711328733585578 24.30198278750499 25 21.28244417107719 25.108210847037633 28.155389731801012 25.453955250084164 26 21.72942909186452 25.94738224964465 27.779594571901256 24.543594086589568 27 21.342143936697358 26.12616014803614 28.492295676949542 24.039400238316965 28 21.15886645973962 23.72041225781621 30.5953665589714 24.525354723472777 29 22.683420097528366 23.1496889264568 29.06229586175366 25.104595114261173 30 23.84768605154749 24.59148245847331 27.926955769946186 23.633875720033007 31 25.602119944301645 26.22306178644518 24.907497503135644 23.267320766117532 32 24.92662071204224 26.2278024138632 25.85240900204972 22.993167872044843 33 24.81798802951402 25.62276979593608 25.135208318435176 24.424033856114725 34 23.661114240282316 24.50157123676541 26.790731832348918 25.04658269060335 35 23.46666816652619 24.6594582346707 26.818372100684503 25.055501498118616 36 25.388711360873433 26.15460391254426 25.799217555427173 22.65746717115513 37 24.558699814633435 27.08698087116662 26.73063031864248 21.62368899555747 38 23.43452831962435 26.48114475706695 26.42578387077853 23.65854305253017 39 23.920884552866433 24.201224367467724 27.471534139347124 24.406356940318716 40 24.499321447482288 23.24249273438586 27.697959360770586 24.56022645736127 41 21.759720897569505 24.343041441922093 27.919402905924258 25.977834754584144 42 22.09566264731098 25.780496094606853 27.229681791410787 24.894159466671383 43 22.860430304340245 24.826987186646537 27.74391934184022 24.568663167173003 44 23.513431643768364 23.744276094140826 27.011532580564552 25.730759681526255 45 24.376225833848242 23.615877405767975 25.648079925371274 26.359816835012506 46 24.422587563004143 23.735357286625565 27.456026663216992 24.386028487153304 47 22.490339967265566 24.53491632792607 29.27699003905795 23.69775366575041 48 22.255879784116647 24.017223743954695 29.11307681985857 24.613819652070088 49 23.918313365114287 22.219642106734824 29.765837110434923 24.096207417715966 50 23.607842444042518 22.331087025866953 27.7926112098965 26.268459320194026 51 22.580652937059735 22.448638515910428 26.298188678578228 28.67251986845161 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 177.0 1 611.0 2 1045.0 3 3419.5 4 5794.0 5 3995.5 6 2197.0 7 2181.0 8 2165.0 9 2227.5 10 2290.0 11 2357.5 12 2425.0 13 2441.5 14 2458.0 15 2469.0 16 2480.0 17 2569.5 18 2659.0 19 2871.0 20 3083.0 21 3113.0 22 3143.0 23 3505.5 24 3868.0 25 4667.0 26 7022.0 27 8578.0 28 9179.5 29 9781.0 30 12870.0 31 15959.0 32 18553.5 33 21148.0 34 25222.0 35 29296.0 36 31480.5 37 33665.0 38 38506.5 39 43348.0 40 47442.5 41 51537.0 42 58455.5 43 65374.0 44 70891.0 45 76408.0 46 82880.5 47 89353.0 48 102186.5 49 115020.0 50 128939.0 51 142858.0 52 136394.0 53 129930.0 54 110401.5 55 90873.0 56 80564.0 57 70255.0 58 62315.5 59 54376.0 60 49414.5 61 44453.0 62 38631.5 63 32810.0 64 29171.5 65 25533.0 66 22214.0 67 18895.0 68 15612.0 69 12329.0 70 10764.5 71 9200.0 72 7698.5 73 6197.0 74 4964.0 75 2919.5 76 2108.0 77 1648.0 78 1188.0 79 836.0 80 484.0 81 430.5 82 377.0 83 292.5 84 208.0 85 115.5 86 23.0 87 15.0 88 7.0 89 7.0 90 7.0 91 4.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1244561.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.823959495069495 #Duplication Level Percentage of deduplicated Percentage of total 1 75.33505503019444 25.481298499001287 2 11.198604884381577 7.575623160212198 3 4.134300033870116 4.195151906582618 4 2.0312707664297895 2.7482248050895994 5 1.122144747871949 1.8977689249812888 6 0.7243099956303792 1.469941917244555 7 0.503878361303847 1.193021289822832 8 0.38603363757367093 1.0445748896820948 9 0.29877304547900174 0.9095118649650279 >10 3.325174180142168 28.032998887923693 >50 0.8688365286996761 18.868967214095786 >100 0.06763996686055886 4.203551091374163 >500 0.0018723866178018366 0.402471867555309 >1k 0.0018723866178018366 1.553680738127556 >5k 2.3404832722522957E-4 0.42321294334199094 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCGTCTTCTGC 5346 0.42954905384308195 TruSeq Adapter, Index 14 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCGTCTTCTGC 4153 0.3336919604583463 TruSeq Adapter, Index 14 (95% over 22bp) CTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCGTCTTCTGCT 4080 0.3278264383987607 Illumina PCR Primer Index 8 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3232 0.25968996296686137 No Hit GCTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCGTCTTCTGC 3222 0.25888646679431543 TruSeq Adapter, Index 14 (95% over 22bp) TCCTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCGTCTTCTG 1671 0.1342642104324336 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.6069923450919642E-4 0.0 0.0 0.3557077555861063 0.0 2 1.6069923450919642E-4 0.0 0.0 1.5011718991676584 0.0 3 1.6069923450919642E-4 0.0 0.0 2.191937558705439 0.0 4 1.6069923450919642E-4 0.0 0.0 2.935010819075963 0.0 5 1.6069923450919642E-4 0.0 0.0 4.117757185063649 0.0 6 1.6069923450919642E-4 0.0 0.0 5.009637936589689 0.0 7 1.6069923450919642E-4 0.0 0.0 5.739855258199477 0.0 8 1.6069923450919642E-4 0.0 0.0 6.984872577559477 0.0 9 1.6069923450919642E-4 0.0 0.0 7.6541848892902795 0.0 10 1.6069923450919642E-4 0.0 0.0 8.877748860843301 0.0 11 1.6069923450919642E-4 0.0 0.0 11.028386716279877 0.0 12 1.6069923450919642E-4 0.0 0.0 12.7927839615736 0.0 13 1.6069923450919642E-4 0.0 0.0 13.392834903230938 0.0 14 1.6069923450919642E-4 0.0 0.0 13.599895866896038 0.0 15 1.6069923450919642E-4 0.0 0.0 13.899037491934907 0.0 16 2.4104885176379461E-4 0.0 0.0 14.678348429687254 0.0 17 2.4104885176379461E-4 0.0 0.0 15.801957477375556 0.0 18 3.2139846901839284E-4 0.0 0.0 17.0049519469114 0.0 19 3.2139846901839284E-4 0.0 0.0 17.81640273156559 0.0 20 3.2139846901839284E-4 0.0 0.0 18.60696261573358 0.0 21 4.0174808627299103E-4 0.0 0.0 19.755238995919044 0.0 22 4.0174808627299103E-4 0.0 0.0 20.880455035952437 0.0 23 4.0174808627299103E-4 0.0 0.0 22.111812920379155 0.0 24 4.0174808627299103E-4 0.0 0.0 23.03511037225174 0.0 25 4.0174808627299103E-4 0.0 0.0 23.84270437527771 0.0 26 4.0174808627299103E-4 0.0 0.0 24.54608492472446 0.0 27 4.8209770352758923E-4 0.0 0.0 25.224316043970525 0.0 28 4.8209770352758923E-4 0.0 0.0 25.921509672888675 0.0 29 5.624473207821875E-4 0.0 0.0 26.71914032337507 0.0 30 5.624473207821875E-4 0.0 0.0 27.522556146303796 0.0 31 5.624473207821875E-4 0.0 0.0 28.273503669165272 0.0 32 5.624473207821875E-4 0.0 0.0 29.00267644575075 0.0 33 5.624473207821875E-4 0.0 0.0 29.714654404243745 0.0 34 5.624473207821875E-4 0.0 0.0 30.42590921618145 0.0 35 5.624473207821875E-4 0.0 0.0 31.189873377038168 0.0 36 5.624473207821875E-4 0.0 0.0 31.947650617366286 0.0 37 5.624473207821875E-4 0.0 0.0 32.68606359993604 0.0 38 5.624473207821875E-4 0.0 0.0 33.41170099336232 0.0 39 5.624473207821875E-4 0.0 0.0 34.137820484492124 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTTA 25 3.8909915E-5 45.000004 11 TATTGCG 80 0.0 45.0 1 TACGCGC 35 1.212029E-7 45.0 34 TACGAAC 20 7.033513E-4 45.0 44 CGAATAC 20 7.033513E-4 45.0 31 AATAGCG 20 7.033513E-4 45.0 36 TAAGCGT 20 7.033513E-4 45.0 14 TCGAATC 20 7.033513E-4 45.0 19 TAGTTCG 30 2.1656488E-6 44.999996 1 CGTTTAG 30 2.1656488E-6 44.999996 30 GCGTACT 30 2.1656488E-6 44.999996 9 TTTACGG 210 0.0 41.785713 2 TTACGGG 365 0.0 41.30137 3 CGTTTTT 2300 0.0 40.108696 1 AATTCGC 45 1.9284926E-8 40.0 13 ACACGAC 85 0.0 39.705883 26 ACGCGCA 40 3.4585355E-7 39.375 35 TGTTACG 70 0.0 38.571426 1 CGGGATC 365 0.0 38.219177 6 CGAATAT 125 0.0 37.800003 14 >>END_MODULE