SRR2933127.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933127.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	971731
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGCT	3681	0.37880853857703417	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2697	0.2775459463575825	No Hit
CCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC	2582	0.26571139543762623	No Hit
GCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC	2458	0.2529506622717604	No Hit
TCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC	2296	0.23627938184538727	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTTTA	25	3.890358E-5	45.000004	38
ATTCACG	20	7.032746E-4	45.000004	21
GAGCGTA	25	3.890358E-5	45.000004	9
AAACCGG	25	3.890358E-5	45.000004	18
CGAATCG	25	3.890358E-5	45.000004	37
GAACGAT	20	7.032746E-4	45.000004	9
ATGCGAG	20	7.032746E-4	45.000004	27
CGGTCTA	25	3.890358E-5	45.000004	31
CGACTAT	20	7.032746E-4	45.000004	33
GTTTACG	30	2.165154E-6	44.999996	1
ATGCGAA	65	0.0	41.53846	26
AACACGT	55	6.002665E-11	40.90909	41
AACCCGA	105	0.0	40.714287	24
TCCGCAT	50	1.0804797E-9	40.500004	26
CTCGTAG	45	1.927765E-8	40.000004	1
AATAGCG	45	1.927765E-8	40.000004	21
CAACCCG	125	0.0	39.6	23
ACTCGCT	40	3.4574805E-7	39.375004	10
TCAGACG	400	0.0	38.812504	22
TATGGGA	635	0.0	38.622047	4